Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0521
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.11 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.11 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.46 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.46 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.61 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 97  KNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQ 210
           K  P+  ++   I E   N  +D P ++S K +KN++Q
Sbjct: 271 KKMPIAIVAPFTIVEPKLNKHEDLPQDLSMKLSKNNDQ 308


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 97  KNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQ 210
           K  P+  ++   I E   N  +D P ++S K +KN++Q
Sbjct: 163 KKMPIAIVAPFTIVEPKLNKHEDLPQDLSMKLSKNNDQ 200


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 301 SFLEGLRLRFFDFLPSFLELYFHRFLDTVAPGY 203
           S +  + +  F F+PSF++++   F+D  A  Y
Sbjct: 209 SVIRSISVFSFFFMPSFVDIFRLTFVDKTASDY 241


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 17/90 (18%), Positives = 35/90 (38%)
 Frame = -3

Query: 456 CSFSFQIHLCXQAHFDFLVLIYVFSFCSPLV*SVLMLAFRLHLFRFHVQLLDHFWRVYVC 277
           C   F +HL       +    ++      L   VL++   ++ F +   L      + VC
Sbjct: 198 CLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVC 257

Query: 276 AFSIFYLPSLNCIFIDFLTLWLLVIVFVKF 187
            +  +Y+  L C      T+ LL ++ + +
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287



 Score = 24.6 bits (51), Expect = 0.61
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
 Frame = -3

Query: 417 HFDFLVLIYVFS-----FCSPLV*SVLMLAFRLHLFRFHVQLLDHFWRVYVCAFSIFYLP 253
           H   LV IY F      FC   +   + L F L ++ F+  L+      Y C   I +  
Sbjct: 251 HLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPT 310

Query: 252 SLNCIF 235
              C F
Sbjct: 311 HFYCAF 316


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -3

Query: 252 SLNCIFIDFLTLWLLVIVFVKFK*NLQRCIVIRISINFFNLGTR*IMNWFIFIFTATGFS 73
           SLN +F   L LW+L+ V V         + + + + FF L  + +  + + I      S
Sbjct: 94  SLNQVFAPQLLLWVLLGVMV---------VTVDLHVFFFTLFNKLLGQYPVGIVGVKNAS 144

Query: 72  WIIFD-VLIYFAC 37
             IFD + + F C
Sbjct: 145 LFIFDLIFLSFRC 157


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 26  KYKTQAK*MRTSKIIQLNPVAVKI 97
           KY T+A+ +  +  +QLN   VKI
Sbjct: 276 KYLTRARRIEIASALQLNETQVKI 299


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 26  KYKTQAK*MRTSKIIQLNPVAVKI 97
           KY T+A+ +  +  +QLN   VKI
Sbjct: 65  KYLTRARRIEIASALQLNETQVKI 88


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 26  KYKTQAK*MRTSKIIQLNPVAVKI 97
           KY T+A+ +  +  +QLN   VKI
Sbjct: 65  KYLTRARRIEIASALQLNETQVKI 88


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 34  NTSEVNENIEDNPAKSSG 87
           N SE++EN    PA S+G
Sbjct: 57  NVSEISENFYYLPAMSTG 74


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 108 WFIFIFTATGFSWIIFDVLIY 46
           W + IF     S I FDV+++
Sbjct: 139 WAVTIFLVLAASVIFFDVVVW 159


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory
          receptor candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 84 TGFSWIIFDVLIYFACVLYFIKGQTF 7
          +G  W I  VLIY   V+Y  K + F
Sbjct: 17 SGKLWPISIVLIYTVGVVYSFKRRIF 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,638
Number of Sequences: 336
Number of extensions: 2616
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)