Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0521
(575 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 1.5
11_03_0022 - 9015408-9015467,9015468-9015560,9017326-9017420,901... 29 2.0
09_02_0407 - 8635717-8636122,8636342-8636729,8637040-8637379 29 2.0
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 29 2.0
03_02_0415 - 8263459-8263611,8263788-8263919,8264841-8264936,826... 29 2.0
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 29 2.0
06_02_0100 + 11735424-11735958,11736168-11736916,11752859-117531... 28 4.6
09_04_0496 + 18079905-18081586,18084825-18084868,18086396-180865... 28 6.1
08_02_0406 + 16813099-16813166,16813914-16814480,16814549-168145... 28 6.1
08_01_0626 - 5445676-5446687,5447099-5447430 28 6.1
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790... 28 6.1
06_03_1513 - 30692833-30693258,30693365-30693541,30693807-306938... 28 6.1
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 28 6.1
07_01_0729 - 5560405-5561235 27 8.1
07_01_0463 + 3502708-3503535 27 8.1
04_04_0625 + 26682725-26683066,26683555-26683659,26683790-266839... 27 8.1
03_05_0976 - 29341981-29342229,29342388-29342621,29342771-293430... 27 8.1
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 27 8.1
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKNKPVHDLS-GTQIEE--IDANSDDDAPLEISFKFNKND 204
NT+ V E ++ + + NK +HD+ TQ+ E +D D+ ++ + +
Sbjct: 1900 NTNLVKEGPNEHGSSQTSNVQDNKQLHDVGLQTQVRERSVDIGQQDEDMKNVNLDQQQKE 1959
Query: 205 NQEPQCQEIDE 237
++E + Q+ DE
Sbjct: 1960 DEEIEKQKEDE 1970
>11_03_0022 -
9015408-9015467,9015468-9015560,9017326-9017420,
9018019-9018079,9018601-9018620,9018743-9018824,
9018919-9019020,9019116-9019532
Length = 309
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/76 (25%), Positives = 28/76 (36%)
Frame = +1
Query: 67 NPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQCQEIDENTI 246
NP++S K K T++ + S K N D EP + E +
Sbjct: 219 NPSRSKDAKVLAKETKQAFLTELSKTSNQSQKGKASSNFSKNNSKDEDEPGWAPLRETYM 278
Query: 247 QGRKVKNRKSANVNPP 294
G K+K+ V PP
Sbjct: 279 LGSKLKDWDKMQVKPP 294
>09_02_0407 - 8635717-8636122,8636342-8636729,8637040-8637379
Length = 377
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 16 SLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDA--------P 171
S N +Q +S ++ +DN S G + P H SG I +D +A P
Sbjct: 108 SQNNLQESSLISMISQDNQLASIGFSSATGPTH--SGHYILGWSFTTDGEAQPLNHSALP 165
Query: 172 LEISFKFNKNDNQEP 216
LE++ F K DN +P
Sbjct: 166 LEVAHDFAKQDNLKP 180
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/76 (23%), Positives = 30/76 (39%)
Frame = +1
Query: 13 LSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKF 192
LS + E +++ +P + G DL Q++E+DA D +I +
Sbjct: 277 LSATPNDDDDEEEDDVSSDPVSGTAG--------DLGAPQVKEVDAEGKDPKIDDIENEG 328
Query: 193 NKNDNQEPQCQEIDEN 240
N QC + EN
Sbjct: 329 GMNSGDVNQCDSVPEN 344
>03_02_0415 -
8263459-8263611,8263788-8263919,8264841-8264936,
8265021-8265137,8265352-8265435,8265517-8265577,
8266217-8266266,8266544-8266633,8267539-8267757,
8269207-8269262,8269469-8269546,8269707-8269811,
8269925-8270069,8270310-8270388,8270470-8270537,
8271550-8271626,8272676-8272712,8273107-8273232,
8273770-8273805
Length = 602
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +1
Query: 4 KKRLSLNKIQ-NTSEVNENIEDN---PAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAP 171
K +S +K++ N S N D P K + DLS EEID SDD+
Sbjct: 335 KTSVSDDKVKSNNSGTASNGNDQGLQPPKKAARTGHGAARKDLSA---EEIDYCSDDETL 391
Query: 172 LEISFKFNKNDNQEPQCQEIDENTIQGRKVKNRK 273
+E + +K D Q +E EN+I ++ RK
Sbjct: 392 IE-KLENSKTDLQSKITKEAKENSILQASLERRK 424
>02_01_0451 -
3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 1 DKKRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDA 168
D + +++K+QN SE EN++ K + ++P DL + + S D +
Sbjct: 291 DVDKQNISKLQNASETIENLDIEKQKGGAQGDVSEPQSDLDQMLLSSVKDTSRDSS 346
>06_02_0100 +
11735424-11735958,11736168-11736916,11752859-11753118,
11760085-11760124
Length = 527
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2
Query: 298 FLEGLRLRFFDFLPSFLELY 239
F GLRL DFLPS LE+Y
Sbjct: 8 FAAGLRLPCDDFLPSVLEMY 27
>09_04_0496 +
18079905-18081586,18084825-18084868,18086396-18086502,
18087069-18087674,18087789-18088013,18088102-18088167,
18088268-18088336,18088511-18088582,18088672-18088848,
18089978-18090115
Length = 1061
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 61 EDNPAKSSGGKNKNKPVHDLSGTQIEE 141
E +PA ++GGK+K K + S +Q EE
Sbjct: 842 ESSPATTNGGKSKGKGAKETSESQKEE 868
>08_02_0406 +
16813099-16813166,16813914-16814480,16814549-16814595,
16814787-16815484
Length = 459
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2
Query: 298 FLEGLRLRFFDFLPSFLELY 239
F GLRL DFLPS LE+Y
Sbjct: 91 FAVGLRLPCDDFLPSVLEIY 110
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEK 446
+ E HE+E ++ + EE ++++ + E+ NV ++DE E+
Sbjct: 182 ESEMEHEMEHEMMHDDDDDEEEEEEEEEEEDEFLYEDENVDDDEDEGEE 230
>07_03_0358 - 17177253-17177369,17177635-17177931,17178961-17179032,
17179117-17179383,17179752-17179910,17180194-17180295,
17180696-17180767,17181105-17181200,17181710-17181871,
17181941-17182021,17182837-17183094,17183173-17183275,
17183412-17183542,17184827-17184919,17184999-17185099,
17186271-17186355,17186487-17186701,17186779-17186842,
17187128-17187214,17188922-17189022,17190206-17190397,
17190533-17190599,17191211-17191351
Length = 1020
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +1
Query: 22 NKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDD 162
++ ++ E ++ + + GG ++ P H L+ +E+ DA DD
Sbjct: 935 DEYRDEPEAEDDYANTARSNDGGDSEKAPGHLLAAAGLEDSDAEEDD 981
>06_03_1513 -
30692833-30693258,30693365-30693541,30693807-30693818,
30693988-30694033,30695070-30695365
Length = 318
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
N Q A+ EK+ EK L+ + KK + + NV +KD++ ++
Sbjct: 125 NSQNAILLEEKEKKEKEMRNQIILDAKEFKKAFVEKRKLNVETSKDQNRER 175
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 318 EIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
E E EK T E E KKKK+K ++E+ P + KK
Sbjct: 466 ETEPAPAEKTTKEDGDQEGEKKKKKKKSKESEESPAADADGGKK 509
>07_01_0729 - 5560405-5561235
Length = 276
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +1
Query: 139 EIDANSDDDAPLEISFKFNKNDNQEPQ 219
E+D +++ P E+ F+ + + +EPQ
Sbjct: 86 EVDEEEEEEDPQEVEFEVEEEEEEEPQ 112
>07_01_0463 + 3502708-3503535
Length = 275
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 324 EKDVNEKPTSEHFTL-EENKKKKRKLAQENRNVPXNKDESEKK 449
E ++K EH EE KKK++++ ++ ++ K+E +KK
Sbjct: 84 ENKKSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKK 126
>04_04_0625 +
26682725-26683066,26683555-26683659,26683790-26683951,
26684042-26684102,26684798-26684922,26685532-26685603
Length = 288
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 67 NPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQCQEIDENTI 246
+PA S+GGK K K + + D DDD E S +++ +E + +
Sbjct: 55 SPASSAGGKGKRKSRAADADEEYLPSDGGEDDDEE-ESSSTSDQDGEEEEDAEASSRSRK 113
Query: 247 QGRK--VKNRKSANV 285
+G+K + + KS+ V
Sbjct: 114 KGKKKVLNSGKSSQV 128
>03_05_0976 -
29341981-29342229,29342388-29342621,29342771-29343046,
29343181-29343457,29343549-29343847,29344021-29344152,
29344451-29344660,29344812-29344875,29346114-29346260,
29346477-29346760
Length = 723
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = -3
Query: 450 FSFQIHLCXQAHFDFLVLIYVFSFCSPLV*SVLMLAFRLHLFRFHVQLLDHFWRVYVCAF 271
+SF H F +L + FS +PL+ L++ F L + Q+L+ ++ Y
Sbjct: 517 YSFPYHTEVPKVLLFNLLGFTFSIMAPLILPFLLVYFCLGYLVYRNQILNVYYPKYEMGG 576
Query: 270 SIFYLPSLNCIFIDFLTLWLLVIVF 196
++ + +F LT + + VF
Sbjct: 577 KLWPIMHSTLVFALVLTQTIALGVF 601
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 136 EEIDANSDDDAPLEISFKFNKNDNQEPQCQEIDENTIQGRKVKNRK 273
+E D SDD+ +E + NK D Q +E+ EN+I + RK
Sbjct: 598 DETDFCSDDETLIE-KLENNKTDLQSKITKEVKENSILQASLGRRK 642
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,177,726
Number of Sequences: 37544
Number of extensions: 218049
Number of successful extensions: 832
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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