Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0521
(575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.041
SB_2978| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 31 0.67
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_17465| Best HMM Match : Dpy-30 (HMM E-Value=0.05) 30 1.2
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_42479| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_40414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 30 1.6
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 29 2.1
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 2.1
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_55329| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046) 29 2.1
SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_23597| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56090| Best HMM Match : BenE (HMM E-Value=0.2) 29 3.6
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 28 4.8
SB_36421| Best HMM Match : DUF433 (HMM E-Value=1.1) 28 6.3
SB_29153| Best HMM Match : DUF433 (HMM E-Value=1.1) 28 6.3
SB_41025| Best HMM Match : APC_crr (HMM E-Value=6.7) 28 6.3
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_23600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38) 28 6.3
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 27 8.3
SB_41673| Best HMM Match : Glyco_hydro_38 (HMM E-Value=2.3e-24) 27 8.3
SB_15962| Best HMM Match : DUF528 (HMM E-Value=0.083) 27 8.3
SB_49283| Best HMM Match : NapE (HMM E-Value=1.7) 27 8.3
SB_48579| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_30399| Best HMM Match : ERM (HMM E-Value=0.37) 27 8.3
SB_24365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_14941| Best HMM Match : SH3_1 (HMM E-Value=1.1e-12) 27 8.3
SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 27 8.3
SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9) 27 8.3
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
E E DVNEKP E EE+KK+++K E P K E E K
Sbjct: 626 EPKDEKSDDVNEKPKDEEAEKEEDKKEEKK---EEEKKPDEKKEDESK 670
>SB_2978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 49 NENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQCQE 228
++N +D + GKN KP SG + + + +SD++ P E K+D++ P +
Sbjct: 24 DDNDDDEDDNTEEGKNDEKPTEQKSGNE-KPVKKSSDEEKPTE-----QKSDDERPVEEP 77
Query: 229 IDENTIQGRKVKNRK 273
+ Q + N+K
Sbjct: 78 AKDEKPQEKASDNKK 92
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTL-EENKKKKRKLAQENRNVPXNKDESEK 446
+D + E E+D + KP+S T +E+KK K+K +E +++E ++
Sbjct: 735 DDDDEEEESEEDESNKPSSRQVTAKKEDKKGKKKKKEEEEEEEEDQEEEDE 785
>SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +1
Query: 16 SLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFN 195
S NK N + NEN +N + + N + +D + + E ++NSD++ S N
Sbjct: 15 SNNKNYNNNSYNENDNNNNSDNKNDNNNSDNENDNNNSYNENDNSNSDNENDNNNSNNEN 74
Query: 196 KNDNQEPQCQEIDEN 240
N+N + + N
Sbjct: 75 DNNNSNNENDNNNSN 89
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 321 IEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
I KD+N K E +T E+ K+K+R + +E ++ E E+K
Sbjct: 136 IGKDINVKKRDEFWTQEQQKEKER-IEEEKNRAAAHQQELERK 177
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQE 213
N +E N+N D+ K N NK ++ T + + ++D + + + K N ND +
Sbjct: 35 NINENNDNTNDDNNKHINDDNDNKTNNNDKDTNDDNTNEDNDKNNNDDNNNKTNDNDTND 94
Query: 214 PQCQEIDENTIQGRKVKNRKSANVN 288
+ +E + + + N N
Sbjct: 95 ENINDDNEKNTNDKNNNDDSNENTN 119
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 19 LNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNK 198
L+ I T+ +N N E+N + + NK ++D + + D +++DD E + K N
Sbjct: 25 LHSITRTTNININ-ENN---DNTNDDNNKHINDDNDNKTNNNDKDTNDDNTNEDNDKNNN 80
Query: 199 ND-NQEPQCQEIDENTIQGRKVKNRKSANVN 288
+D N + + ++ I KN N N
Sbjct: 81 DDNNNKTNDNDTNDENINDDNEKNTNDKNNN 111
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 DKKRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEI 180
D + N ++T++ N N EDN K++ N NK + + D N +DD
Sbjct: 54 DNDNKTNNNDKDTNDDNTN-EDND-KNNNDDNNNKTNDN------DTNDENINDDNEKNT 105
Query: 181 SFKFNKNDNQEPQCQEIDENTIQGRKVKN-RKSANVN 288
+ K N +D+ E + D+NT KN K N N
Sbjct: 106 NDKNNNDDSNENTNDDNDKNTNDDNDKKNDDKDKNTN 142
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +1
Query: 19 LNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNK 198
+ +I+ + NE E + + K + + D + EEI+ DD+ EI + +
Sbjct: 145 VEEIEKREDANEKEEIEEREDANEKEEIEERED--DNEKEEIEEREDDNEKEEIDEREDD 202
Query: 199 NDNQEPQCQEIDENTIQGR 255
N+ +E + +E D++ ++ R
Sbjct: 203 NEEEEIEEREDDDDEVEER 221
>SB_17465| Best HMM Match : Dpy-30 (HMM E-Value=0.05)
Length = 249
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
+ +H++ +D+ + E F+ EENK K K + R + K+E E++M
Sbjct: 177 KGLHKVTEDLKK----EIFSSEENKLAKMKEEAKQRRIVREKEEKEREM 221
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 333 VNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
V EK SE E+ +++K+K A E + K+E EKK
Sbjct: 624 VFEKHLSEEIDKEKKEEQKKKKAAEAKAAASKKEEDEKK 662
>SB_42479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTSEHFTLEENKKKKRK 395
E E DVNEKP E EE+KK+++K
Sbjct: 9 EPKDEKSDDVNEKPKDEEAEKEEDKKEEKK 38
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/94 (22%), Positives = 41/94 (43%)
Frame = +1
Query: 1 DKKRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEI 180
+KK + N T E + ++N K+ K+K K D + ++ N D +
Sbjct: 396 NKKDKTKNNKDKTKENKDKTKENKDKTKNNKDKTKENKDKTKENKDKTKENKDKTKENKD 455
Query: 181 SFKFNKNDNQEPQCQEIDENTIQGRKVKNRKSAN 282
K NK+ +E + + EN + ++ K++ N
Sbjct: 456 KTKENKDKTKENK-DKTKENKDKTKENKDKTKEN 488
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/94 (23%), Positives = 38/94 (40%)
Frame = +1
Query: 1 DKKRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEI 180
+K + NK T E + ++N K+ K+K K D + ++ N D
Sbjct: 453 NKDKTKENK-DKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKNNKDKTK---- 507
Query: 181 SFKFNKNDNQEPQCQEIDENTIQGRKVKNRKSAN 282
K N+N++ + D+ K K K+AN
Sbjct: 508 ENKDKTNENKDKTKENKDKTKENKNKTKENKTAN 541
>SB_40414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
+E+ ++ + + E E +EE +K+++ LA + NV +KDES+K+
Sbjct: 87 KESTNKSKASIQEVTDEEAKRIEEEEKRRKTLA--DTNVDSSKDESKKE 133
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKN--KPVHDLSGTQIEEID-ANSDDDAPLEISFKFNKND 204
N+S N N +++ +S N N D S + D +NSDD P + + +D
Sbjct: 97 NSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSD 156
Query: 205 NQEPQCQEIDENTIQGRKVKNRKSANVN 288
N D +T N S N N
Sbjct: 157 NSNTDNSNSDNSTSDNSNPDNLTSDNSN 184
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/89 (20%), Positives = 32/89 (35%)
Frame = +1
Query: 22 NKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKN 201
N + S + + DN K + N + + S ++NSD+ + + +
Sbjct: 227 NSNSDNSYTDNSTSDNSKKDNSNPNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSS 286
Query: 202 DNQEPQCQEIDENTIQGRKVKNRKSANVN 288
DN D +T +N S N N
Sbjct: 287 DNSNSDNSNTDNSTSNNSNPENSTSDNSN 315
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +1
Query: 7 KRLSLNKIQNTSEVN-ENIEDNPAKS-SGGKNKNKPVHDLSGTQIEEI-DANSDDDAPLE 177
++L + +NT E EN + N KS + K + S TQ EEI D S D PLE
Sbjct: 212 EKLKGGEKENTDEGRTENRDSNENKSPTSEKRLFDSSYKESPTQSEEIKDEKSSKDKPLE 271
Query: 178 ISFKFNKNDNQEPQCQEIDENT 243
K+ + PQ E +T
Sbjct: 272 EKAPQTKSTSPSPQPTEAKPHT 293
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 315 HEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEK 446
+E E D EK EE KKKK+K +E + NK+E+E+
Sbjct: 1883 NEEEDDKKEKKEENE---EEEKKKKKKENEEEDDKKNNKEENEE 1923
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
N++E E EK EK E E++KKKK K ++ +DE +K
Sbjct: 1916 NNKEENEEDEK--KEKKKKEENEEEDDKKKKTKKKKKKEEEEQEEDERRRK 1964
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 4 KKRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSD 159
+K L N N + D+ KSSG N +K D S Q I AN+D
Sbjct: 807 EKTLKANVQDNIKVTKGSFSDSSDKSSGSDNTDKMSSDKSVKQDSSIYANAD 858
>SB_55329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 327 KDVNEKPTSEHFTLEENKKKKRKLAQENRNV--PXNKDE-SEKKMN 455
KD+++ S HFT+E K++ + L + +V P NKD SE+ N
Sbjct: 2 KDISQMLYSSHFTIERKKEQCKALYTVHMSVRYPINKDRISERYRN 47
>SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046)
Length = 940
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQE 213
N ++ E ++ + SSG + + HDL G I + DDD P E+ + + + +
Sbjct: 82 NLDDLPELVDAATSDSSGDSSDSDDNHDLDG--INSV-LTDDDDGPPELVTESSAASDSD 138
Query: 214 PQCQEIDENTIQGRKVKNRKSANVN 288
+ +N + +K K + N
Sbjct: 139 EIDARLKKNNTEAKKPKRTSDGHPN 163
>SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESE 443
D+E E+EK+ E+ E EE K+ + ++ +E ++E+E
Sbjct: 34 DEEEEEEVEKEEEEEEVEEEEEEEEEKEDEIEVEEEEEEKENEEEENE 81
>SB_23597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLS---GTQIEEIDANSDDDAPLEISFKFNKNDNQEP 216
V+ N E A + +K PV D S GT E+ DDD P E D+ +
Sbjct: 14 VSINCESETASAQDVSDKTSPVADTSDIGGTTDEDEPMTDDDDIPDEDD---THPDDDDT 70
Query: 217 QCQEIDENTIQGRKVKNRKSA 279
Q +E D + + N + A
Sbjct: 71 QLEESDNAGVANTETANDEPA 91
>SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +1
Query: 22 NKIQNTSEVNEN-IEDNPAKSSGG-KNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFN 195
NK N + N N I++N +S G N N V + + + N + ++ +N
Sbjct: 80 NKDNNNDDENSNSIDENSINNSQGCNNNNDKVVTTQQCKDDNNNNNGNKNSKNNSDSDYN 139
Query: 196 KN---DNQEPQCQEIDENTIQGRKVKNRKSANV 285
N +N + IDEN+I + N + V
Sbjct: 140 NNKDNNNDDENSNSIDENSINNSQGCNNNNDKV 172
>SB_56090| Best HMM Match : BenE (HMM E-Value=0.2)
Length = 520
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 103 KPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQCQEIDENTIQGRKVKNRK 273
+PV +L G + D + DD S + + E + EIDE + R+++N+K
Sbjct: 115 EPVQELQG--VVATDRETIDDPNTSESRRQEARERNEERLSEIDERERENRELENQK 169
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 43 EVNENIEDNPAKSSGGK---NKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQE 213
E+ + ++ ++S GK + KP H+ +++E D++SDD+ +E S + + +++
Sbjct: 838 ELKHSSQNGDFETSNGKLRKKREKPKHNSPDSEVETSDSSSDDE--VETSDRQLRRKSEK 895
Query: 214 PQCQEID 234
P+ D
Sbjct: 896 PKYNSPD 902
>SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENKKKK--RKLAQENRNVPXNKDESE 443
ND + V EIEK+ +P +T+ E+K++ R++ +E R ++D+ +
Sbjct: 557 NDNKEVEEIEKNPPVEPA--EYTISEDKREDMFRQIIKEERTPSTDEDDGD 605
>SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 210 LVIVFVKFK*NLQRCIVIRISINFFNLGTR*IMNWFIFIFTATGFSWIIFDVLIYFACV 34
+V+VF+ + R ++R+S+ F + T I++ F F+F +I F L F V
Sbjct: 808 IVLVFLLVRVIRYRLDIVRVSLLFLLVDTVLILSAFFFLFLLVDTVFISFAFLFLFLLV 866
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 DKKRLSLNKI--QNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEID 147
+K+ L+ KI + E E+++ +K K KPVH S T+ EE+D
Sbjct: 657 EKQGLNSEKIVAKKKVESRESLDKKRSKVKSSKTSGKPVH--SDTESEEVD 705
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/84 (19%), Positives = 35/84 (41%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQE 213
N++ N+ + + ++ N N + S + N + + + + NK++N +
Sbjct: 145 NSNNQNQQQQKDDNNNNNKSNNNDDDKNNSKDDNNNNNGNKNSNNNSDSDYNNNKDNNDD 204
Query: 214 PQCQEIDENTIQGRKVKNRKSANV 285
IDEN+I + N + V
Sbjct: 205 ENSNSIDENSINNSQGCNNNNDKV 228
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +1
Query: 7 KRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKP-------VHDLSGTQIEEIDANSDDD 165
++ SLN+ T++ +N ++ P K K+++KP D + E+ + +D
Sbjct: 233 RKTSLNRSLTTNKPEDNADEKPEKKLDDKSEDKPEDNADEKPEDNPEDKPEDKTEDRPED 292
Query: 166 APLEISFKFNKNDNQEPQCQEIDENTIQ-GRKVKNRKSANVN 288
P E + +NQ+ + ++ + T + RK + S N +
Sbjct: 293 KP-EDKLEDKPKENQQNKPEDKQQTTPKTSRKTSQKTSLNAS 333
>SB_36421| Best HMM Match : DUF433 (HMM E-Value=1.1)
Length = 444
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 61 EDNPAKSSGGKNKNKPVHDLSG--TQIEEIDANSDDDAPLEISFKFNKNDN 207
+D+PA S+ GKN N P+ S +Q++++ + DDA + S + N
Sbjct: 124 KDSPANSNQGKNGN-PISRRSSLYSQVDQVHQMTQDDAYTQQSLRVYAEKN 173
>SB_29153| Best HMM Match : DUF433 (HMM E-Value=1.1)
Length = 680
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 61 EDNPAKSSGGKNKNKPVHDLSG--TQIEEIDANSDDDAPLEISFKFNKNDN 207
+D+PA S+ GKN N P+ S +Q++++ + DDA + S + N
Sbjct: 124 KDSPANSNQGKNGN-PISRRSSLYSQVDQVHQMTQDDAYTQQSLRVYAEKN 173
>SB_41025| Best HMM Match : APC_crr (HMM E-Value=6.7)
Length = 274
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 124 GTQIEEIDANSDDDAPLEISFKFNKNDNQEPQCQEIDENTIQGRKVKNRKSANV 285
G++ E++ ++ D P +S ++DN++ Q ID I + K ++ A+V
Sbjct: 179 GSKWVEVNGSAGSDTPSGLSVLPFEDDNKDSGSQSIDATPIMDQLFKIQRGAHV 232
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +1
Query: 22 NKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKN 201
N N + N N +N ++ N N +D ++ D + DDD ++ + +
Sbjct: 269 NNNNNNNNNNNNNNNNNNNNNNNNNNNNDDYDDDDDDDDDCDDDDDDDDDVDDDDDDDDD 328
Query: 202 DNQE 213
DN +
Sbjct: 329 DNDD 332
>SB_23600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLS---GTQIEEIDANSDDDAPLEISFKFNKNDNQEP 216
V+ N E A + +K PV D S GT E+ DDD P E D+ +
Sbjct: 23 VSINCESETAPAQDVSDKTSPVADTSDIGGTTDEDAPMTDDDDIPDEDD---THPDDDDT 79
Query: 217 QCQEIDENTIQGRKVKNRKSA 279
Q +E D + + N + A
Sbjct: 80 QLEESDIARVADTETGNDEPA 100
>SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38)
Length = 1523
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 22 NKIQNTSEVNENIEDNPAKSSGGKNKNK---PVHDLSGTQIEEIDANSDDD 165
NK +++ + E+I + + GK++N HD ++ D N DDD
Sbjct: 1252 NKAEDSGGIGESINKDVSVDIDGKDENNEHDDDHDFDDENDDDYDDNDDDD 1302
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 28 IQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDD 162
+ + NE+I++ K SGG N KP D I DAN D
Sbjct: 1336 VDSVGTANEDIDEVMQKGSGGDNCGKPEVDTKNDSIFR-DANWAD 1379
>SB_41673| Best HMM Match : Glyco_hydro_38 (HMM E-Value=2.3e-24)
Length = 687
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDES 440
N V +D +KPTSEHF +E L N + D +
Sbjct: 411 NRPSRVTAYTRDTLDKPTSEHFNIELQAPGSEVLTMNNHLISAEFDST 458
>SB_15962| Best HMM Match : DUF528 (HMM E-Value=0.083)
Length = 1466
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 NPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPL--EISFKFNKNDNQEPQCQEIDEN 240
NP G + + P L +E + +DDD + E++ K D+ + +E+DE
Sbjct: 143 NPKVRQGNDSSDNPFSALDSLAVEFEEFKTDDDPEISPELAKLAAKMDDGDGDSEEVDEF 202
Query: 241 TIQ 249
I+
Sbjct: 203 EIE 205
>SB_49283| Best HMM Match : NapE (HMM E-Value=1.7)
Length = 363
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRN-VPXNKDESE 443
+E + E NEK ++H +EN +KK + E N N+DE E
Sbjct: 290 EEKDKQEENARNEKKETKHKKQQENNEKKEEKRHEGGNKQEENEDEGE 337
>SB_48579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 61 EDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQCQEIDEN 240
+DN + ++ +D G D N+DDD ++ N +D+ + + D N
Sbjct: 258 DDNNDEDGDSDVRHDEYNDEDGDSDVRHDDNNDDDGDSDVRHDDNNDDDGDSDVRHDDNN 317
Query: 241 TIQGRKV 261
G V
Sbjct: 318 DEDGDSV 324
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 339 EKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
EK + ++ KKKK+K ++N+ NK++++KK
Sbjct: 16 EKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKK 52
>SB_30399| Best HMM Match : ERM (HMM E-Value=0.37)
Length = 562
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 67 NPAKSSGGKNKNKPVHDLSGTQIEEIDANS 156
N K++ GKN P H L G + E AN+
Sbjct: 11 NSVKTTQGKNSVSPCHPLEGDKFSENRANA 40
>SB_24365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESE 443
ND E EIEK+ +P + E+ K R++ +E ++D+ +
Sbjct: 357 NDNEEFEEIEKNPPVEPAEYTISEEKRKDLLRQIIEEESTPSSDEDDGD 405
>SB_14941| Best HMM Match : SH3_1 (HMM E-Value=1.1e-12)
Length = 469
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 55 NIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKF-NKN 201
N+E + KSS N K G E+ +A+ D A I+F+F NKN
Sbjct: 9 NLEFHNNKSSSASNAAKRREKSQGKGTEQENASHDPPATSYINFEFHNKN 58
>SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 391
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = -3
Query: 447 SFQIHLCXQAHFDFLVLIYVFSFCSPLV*SVLMLAFRLHLFRFHVQLLDHFWRV 286
S Q+H+ + +F +++L Y S +P++ +L +FR R +++ WR+
Sbjct: 281 SHQVHVPREVYFAWILLGYGSSSINPIIYGILNRSFR----REFIKIFSFKWRL 330
>SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9)
Length = 564
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/66 (21%), Positives = 31/66 (46%)
Frame = +1
Query: 40 SEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQ 219
+EV+++ +D G+ + ++ +E+DA+ DD+ + N +D+ E
Sbjct: 144 NEVDDDDDDEVDTDDDGEVDADDDNKVNAADDDEMDADDDDEVDADDDDVVNADDDDEMD 203
Query: 220 CQEIDE 237
+ DE
Sbjct: 204 ADDDDE 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,756,175
Number of Sequences: 59808
Number of extensions: 271969
Number of successful extensions: 1727
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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