Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0521
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029855-1|AAH29855.1| 179|Homo sapiens ZNF677 protein protein. 33 0.95
AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D... 33 0.95
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ... 33 0.95
AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens ... 33 0.95
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D... 33 0.95
BC030528-1|AAH30528.1| 538|Homo sapiens KIAA1128 protein protein. 32 1.7
AL356115-1|CAI40902.1| 588|Homo sapiens KIAA1128 protein. 32 1.7
AK024324-1|BAB14884.1| 701|Homo sapiens protein ( Homo sapiens ... 32 1.7
AF241785-1|AAG44473.1| 566|Homo sapiens NPD012 protein. 32 1.7
AB032954-1|BAA86442.1| 588|Homo sapiens KIAA1128 protein protein. 32 1.7
BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein. 31 2.2
BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein. 31 2.2
AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein pr... 31 2.2
AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction mol... 31 2.2
AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein. 31 2.2
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 30 5.1
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 30 5.1
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 30 5.1
BC049850-1|AAH49850.1| 800|Homo sapiens nucleolar complex assoc... 30 6.7
AL355341-1|CAD13194.1| 800|Homo sapiens AD24 protein protein. 30 6.7
AB077992-1|BAB84194.1| 800|Homo sapiens AD24 protein. 30 6.7
>BC029855-1|AAH29855.1| 179|Homo sapiens ZNF677 protein protein.
Length = 179
Score = 32.7 bits (71), Expect = 0.95
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 327 KDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
KD +S HF+L++ KKKK+K ++ + K + +KK
Sbjct: 132 KDQQHNKSSIHFSLKKKKKKKKKKKKKKKKKKKKKKKKKKK 172
>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 32.7 bits (71), Expect = 0.95
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTSEHFTLEENKKKKRKL--AQENRNVPXNKDESE 443
+ + E E+D+ EK SE NKKKK+KL +E + KDE E
Sbjct: 73 DELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDE 120
>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 32.7 bits (71), Expect = 0.95
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTSEHFTLEENKKKKRKL--AQENRNVPXNKDESE 443
+ + E E+D+ EK SE NKKKK+KL +E + KDE E
Sbjct: 73 DELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDE 120
>AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens
cDNA FLJ45103 fis, clone BRAWH3032571, moderately
similar to Chromodomain helicase-DNA-binding protein 4.
).
Length = 1225
Score = 32.7 bits (71), Expect = 0.95
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTSEHFTLEENKKKKRKL--AQENRNVPXNKDESE 443
+ + E E+D+ EK SE NKKKK+KL +E + KDE E
Sbjct: 73 DELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDE 120
>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 32.7 bits (71), Expect = 0.95
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTSEHFTLEENKKKKRKL--AQENRNVPXNKDESE 443
+ + E E+D+ EK SE NKKKK+KL +E + KDE E
Sbjct: 73 DELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDE 120
>BC030528-1|AAH30528.1| 538|Homo sapiens KIAA1128 protein protein.
Length = 538
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQ 219
++++++D S +KN D S I+ D+N P E+S K K++N PQ
Sbjct: 361 LSDDVDDISLSSLSSSDKNDLSEDFSDDFIDIEDSNRTRITPEEMSLKEEKHENGPPQ 418
>AL356115-1|CAI40902.1| 588|Homo sapiens KIAA1128 protein.
Length = 588
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQ 219
++++++D S +KN D S I+ D+N P E+S K K++N PQ
Sbjct: 144 LSDDVDDISLSSLSSSDKNDLSEDFSDDFIDIEDSNRTRITPEEMSLKEEKHENGPPQ 201
>AK024324-1|BAB14884.1| 701|Homo sapiens protein ( Homo sapiens
cDNA FLJ14262 fis, clone PLACE1001608. ).
Length = 701
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQ 219
++++++D S +KN D S I+ D+N P E+S K K++N PQ
Sbjct: 361 LSDDVDDISLSSLSSSDKNDLSEDFSDDFIDIEDSNRTRITPEEMSLKEEKHENGPPQ 418
>AF241785-1|AAG44473.1| 566|Homo sapiens NPD012 protein.
Length = 566
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQ 219
++++++D S +KN D S I+ D+N P E+S K K++N PQ
Sbjct: 122 LSDDVDDISLSSLSSSDKNDLSEDFSDDFIDIEDSNRTRITPEEMSLKEEKHENGPPQ 179
>AB032954-1|BAA86442.1| 588|Homo sapiens KIAA1128 protein protein.
Length = 588
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQ 219
++++++D S +KN D S I+ D+N P E+S K K++N PQ
Sbjct: 144 LSDDVDDISLSSLSSSDKNDLSEDFSDDFIDIEDSNRTRITPEEMSLKEEKHENGPPQ 201
>BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein.
Length = 686
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
+E V ++ KD+ T+E +L + +++ K +ENRNV K E+KM
Sbjct: 329 KEHVAKMMKDLESLQTAEQ-SLMDLQERLEKAQEENRNVAVEKQNLERKM 377
>BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein.
Length = 555
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
+E V ++ KD+ T+E +L + +++ K +ENRNV K E+KM
Sbjct: 51 KEHVAKMMKDLESLQTAEQ-SLMDLQERLEKAQEENRNVAVEKQNLERKM 99
>AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein
protein.
Length = 769
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
+E V ++ KD+ T+E +L + +++ K +ENRNV K E+KM
Sbjct: 265 KEHVAKMMKDLESLQTAEQ-SLMDLQERLEKAQEENRNVAVEKQNLERKM 313
>AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction
molecule 2 protein.
Length = 746
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
+E V ++ KD+ T+E +L + +++ K +ENRNV K E+KM
Sbjct: 242 KEHVAKMMKDLESLQTAEQ-SLMDLQERLEKAQEENRNVAVEKQNLERKM 290
>AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein.
Length = 818
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
+E V ++ KD+ T+E +L + +++ K +ENRNV K E+KM
Sbjct: 314 KEHVAKMMKDLESLQTAEQ-SLMDLQERLEKAQEENRNVAVEKQNLERKM 362
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 30.3 bits (65), Expect = 5.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 318 EIEKDVNEKPTSEHFTLEENKKKKRKLAQE-NRNVPXNKDESEK 446
E+E DV+ K T EN K KRK E ++N+ +SE+
Sbjct: 986 ELEADVSHKETKRKLVEAENSKSKRKKPNEYSKNLEKTNRKSEE 1029
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 30.3 bits (65), Expect = 5.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 318 EIEKDVNEKPTSEHFTLEENKKKKRKLAQE-NRNVPXNKDESEK 446
E+E DV+ K T EN K KRK E ++N+ +SE+
Sbjct: 583 ELEADVSHKETKRKLVEAENSKSKRKKPNEYSKNLEKTNRKSEE 626
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 30.3 bits (65), Expect = 5.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 318 EIEKDVNEKPTSEHFTLEENKKKKRKLAQE-NRNVPXNKDESEK 446
E+E DV+ K T EN K KRK E ++N+ +SE+
Sbjct: 986 ELEADVSHKETKRKLVEAENSKSKRKKPNEYSKNLEKTNRKSEE 1029
>BC049850-1|AAH49850.1| 800|Homo sapiens nucleolar complex
associated 3 homolog (S. cerevisiae) protein.
Length = 800
Score = 29.9 bits (64), Expect = 6.7
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENR 413
DQE E+E+++ E P E T+EE+ +++K QE +
Sbjct: 179 DQEEERELEEEIIEDPIQE-LTIEEHLIERKKKLQEKK 215
>AL355341-1|CAD13194.1| 800|Homo sapiens AD24 protein protein.
Length = 800
Score = 29.9 bits (64), Expect = 6.7
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENR 413
DQE E+E+++ E P E T+EE+ +++K QE +
Sbjct: 179 DQEEERELEEEIIEDPIQE-LTIEEHLIERKKKLQEKK 215
>AB077992-1|BAB84194.1| 800|Homo sapiens AD24 protein.
Length = 800
Score = 29.9 bits (64), Expect = 6.7
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENR 413
DQE E+E+++ E P E T+EE+ +++K QE +
Sbjct: 179 DQEEERELEEEIIEDPIQE-LTIEEHLIERKKKLQEKK 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,343,337
Number of Sequences: 237096
Number of extensions: 1304189
Number of successful extensions: 5538
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5380
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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