Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0521
(575 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g40020.1 68417.m05666 hypothetical protein 35 0.045
At5g18700.1 68418.m02219 protein kinase-related contains protein... 33 0.14
At4g09840.1 68417.m01613 expressed protein 31 0.73
At2g15180.1 68415.m01731 zinc knuckle (CCHC-type) family protein... 31 0.73
At2g38800.1 68415.m04764 calmodulin-binding protein-related cont... 30 0.96
At2g22795.1 68415.m02704 expressed protein 30 0.96
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 30 1.3
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 30 1.3
At1g68150.1 68414.m07785 WRKY family transcription factor simila... 30 1.3
At5g14440.1 68418.m01690 surfeit locus 2 protein-related / SURF2... 29 1.7
At5g02700.1 68418.m00208 F-box family protein low similarity to ... 29 2.2
At2g21237.1 68415.m02523 expressed protein 29 2.2
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 29 2.9
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 29 2.9
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 29 2.9
At1g08010.1 68414.m00874 zinc finger (GATA type) family protein ... 29 2.9
At5g60030.1 68418.m07527 expressed protein 28 3.9
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 28 3.9
At4g33750.1 68417.m04792 expressed protein 28 3.9
At4g33740.2 68417.m04791 expressed protein 28 3.9
At4g33740.1 68417.m04790 expressed protein 28 3.9
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 28 5.1
At5g58880.1 68418.m07377 hypothetical protein 28 5.1
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 28 5.1
At1g72440.1 68414.m08377 CCAAT-box-binding transcription factor-... 28 5.1
At4g16830.1 68417.m02540 nuclear RNA-binding protein (RGGA) iden... 27 6.8
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 27 6.8
At1g56110.1 68414.m06443 nucleolar protein Nop56, putative simil... 27 6.8
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 27 6.8
At5g42670.1 68418.m05198 agenet domain-containing protein contai... 27 9.0
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 27 9.0
At5g19300.1 68418.m02300 expressed protein contains Pfam profile... 27 9.0
At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related... 27 9.0
At4g24090.1 68417.m03459 expressed protein 27 9.0
At3g54760.1 68416.m06059 dentin sialophosphoprotein-related cont... 27 9.0
At3g28770.1 68416.m03591 expressed protein 27 9.0
At1g69070.1 68414.m07903 expressed protein 27 9.0
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 27 9.0
At1g56660.1 68414.m06516 expressed protein 27 9.0
At1g15460.1 68414.m01858 anion exchange family protein member of... 27 9.0
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 34.7 bits (76), Expect = 0.045
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
+E V +EK + EK E +ENKK+K++ +E + K++ EKK
Sbjct: 388 KEVVEVVEKKIEEKEKKEE--KKENKKEKKESKKEKKEHSEKKEDKEKK 434
>At5g18700.1 68418.m02219 protein kinase-related contains protein
kinase domain, INTERPRO:IPR000719
Length = 1366
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 13 LSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIE-EIDANSDDDAPLEISFK 189
L L++I + EN ++N + N+N + T +E + D N+DD+ P E
Sbjct: 356 LRLSRIAKANLQKENEKENYRRPLPNSNENCAEVKIDNTDMELDFDENNDDEGPDESEGT 415
Query: 190 FNKNDNQEPQCQEIDENTIQGRKVKN 267
N + QE + +EN + R V +
Sbjct: 416 ENTSCAQEERVMSHNENHRRQRVVSS 441
>At4g09840.1 68417.m01613 expressed protein
Length = 106
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
NDQ+AV V++ E ++++ +RK +E + ++E EK+M
Sbjct: 50 NDQQAVPSAVAGVSDSEEDEEHEAGDDQQSRRKRKREQKENKGQEEEKEKEM 101
>At2g15180.1 68415.m01731 zinc knuckle (CCHC-type) family protein
contains Pfam domain PF00098: Zinc knuckle
Length = 474
Score = 30.7 bits (66), Expect = 0.73
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 16 SLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFN 195
S I S ENI D S+ K + + G ++EI N D+ I K
Sbjct: 295 SAKSIAKVSGTKENITDQGEASTMEKVFTEESKNQGGPTLDEITVNKDESVNDTIQIKGE 354
Query: 196 KNDNQE---PQCQEIDENTIQ 249
+D Q+ QC ++ T+Q
Sbjct: 355 PSDAQQFPKTQCNLLNPYTLQ 375
>At2g38800.1 68415.m04764 calmodulin-binding protein-related
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 612
Score = 30.3 bits (65), Expect = 0.96
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +1
Query: 58 IEDNPAKSSGGKNKNKPVHDL----SGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQ 219
++DN S GK++ P HDL G + S +A E KFN + NQ+ Q
Sbjct: 47 LKDNHVSSQSGKSQELPKHDLVVKVIGGSPNYMKGTSSSEARKENKKKFNLSRNQKNQ 104
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 30.3 bits (65), Expect = 0.96
Identities = 17/94 (18%), Positives = 44/94 (46%)
Frame = +1
Query: 4 KKRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEIS 183
K++ + + T + ++ SS KN++K + + +EE D+ E S
Sbjct: 455 KEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEES 514
Query: 184 FKFNKNDNQEPQCQEIDENTIQGRKVKNRKSANV 285
K + +E + ++ +E++ Q + K++++ +
Sbjct: 515 SSQEKTEEKETETKDNEESSSQ-EETKDKENEKI 547
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +1
Query: 31 QNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQ 210
+ T E ++ SS +N Q+EE + +D+D E S + + +D +
Sbjct: 613 EETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTS-ESSKENSVSDTE 671
Query: 211 EPQCQEIDE 237
+ Q +E E
Sbjct: 672 QKQSEETSE 680
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 19 LNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQ-IEEIDANSDDDAPLEIS-FKF 192
L+ +Q +EV EN+E + KSS K ++ + Q ++ + + + LE S K
Sbjct: 501 LDSLQQRTEVEENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLEKSGKKS 560
Query: 193 NKNDNQEPQCQEIDENTIQGRKVKNRKSANVNP 291
+K ++ ++E + +V N +P
Sbjct: 561 SKKTKKKDSLNIVEEAQVLSVEVNNVAQEEASP 593
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 324 EKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDE-SEKK 449
+K +P + ++ KKKKRK +E +P K E SEKK
Sbjct: 484 KKKTEAEPETAEEPAKKEKKKKRKHEEEETEMPAKKKEKSEKK 526
>At1g68150.1 68414.m07785 WRKY family transcription factor similar
to DNA-binding protein ABF2 GI:1159879 from [Avena
fatua]
Length = 374
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 43 EVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEE-IDANSDDDAPLEISFKFNKNDNQEPQ 219
E E ++ +NK HD SG + E+ + + DD + L + + +N+ +E
Sbjct: 36 EAEEKKKEIEGSKHSRENKEDEEHDASGDEDEQMVKEDEDDSSSLGLRTREEENEREELL 95
Query: 220 CQEIDENTIQGRKVKNRK 273
+I +++ + RK
Sbjct: 96 QLQIQMESVKEENTRLRK 113
>At5g14440.1 68418.m01690 surfeit locus 2 protein-related / SURF2
protein-related contains weak hit to Pfam profile
PF05477: Surfeit locus protein 2 (SURF2)
Length = 291
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 321 IEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKMN 455
I + E P E+ +E+KKKK+K +N NK EKK N
Sbjct: 124 IPAEGGETPAKENGVEDEDKKKKKK---KNNKKKKNKKSVEKKKN 165
>At5g02700.1 68418.m00208 F-box family protein low similarity to
ribosomal RNA apurinic site specific lyase [Triticum
aestivum] GI:6505722; contains F-box domain Pfam:PF00646
Length = 456
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 382 FLFSSSVKCSDVGFSFTSFSISCTAS*SFLEGLRLRF 272
F SSS+K DV F +CT S L L LRF
Sbjct: 141 FYLSSSLKLLDVTLDFFDMIPTCTVSWKSLRNLTLRF 177
>At2g21237.1 68415.m02523 expressed protein
Length = 166
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -3
Query: 165 IVIRISINFFNLGTR*IMNWFIFIFTATGFSWIIFDVLIYFACVLYFIKGQTFLV 1
+ + S+ F G ++ W + TGF WII+ L L + G LV
Sbjct: 39 VFVLSSLTTFTSGMALVIEWICHGKSHTGFGWIIYYALFLMCLPLVILIGLHILV 93
>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
identical to cDNA CIP4.1 mRNA for COP1-interacting
protein 4.1, GI:13160649
Length = 976
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 19 LNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQ-IEEIDANSDDDAPLEIS-FKF 192
L+ +Q +E EN+E + KSS K ++ + Q ++ + + + LE S K
Sbjct: 651 LDSLQQRNEAEENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLEKSGKKS 710
Query: 193 NKNDNQEPQCQEIDENTIQGRKVKNRKSANVNP 291
+K ++ ++E + +V N +P
Sbjct: 711 SKRSKKKDSLNIVEEAQVLSVEVNNVAQEEASP 743
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 363 TLEENKKKKRKLAQENRNVPXNKDESEKK 449
TLEE K+K RKLA+E K+ + K
Sbjct: 456 TLEEEKEKARKLAEEEEKKKAEKEAKKMK 484
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
++ VH+ + ++ K E EE+KKKK + ++ + K+E +KK
Sbjct: 168 KKKVHKHAEIISSKTEEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKK 216
>At1g08010.1 68414.m00874 zinc finger (GATA type) family protein
similar to PIR:T05288 from [Arabidopsis thaliana]
Length = 303
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 324 EKDVNEKPTSE-HFTLEENKKKKRKLAQENRNVPXNKDES 440
EK KP SE +F+ E++ KKKRK+ R V + S
Sbjct: 174 EKSTPGKPESECYFSSEQHAKKKRKIHLTTRTVSSTLEAS 213
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENK-------KKKRKLAQENRNVPXNKDESEKK 449
ND++ V E EK +E+ ++E ++NK K+K KL E R+ K++ +K+
Sbjct: 194 NDEDVVDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKR 251
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 297 NDQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQE 407
+D+E V E K ++ + E EE K KK++ +E
Sbjct: 253 SDEEIVSEERKSKKKRKSDEEMGSEERKSKKKRKLKE 289
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDA-PLEISFKFNKNDNQ 210
N EV EN D N +K D + EE + SDD+A P + + +DN
Sbjct: 247 NADEVAENSSDEDEPKVLKTNNSKADKD----EDEEENETSDDEAEPKALKLSNSNSDNG 302
Query: 211 EPQCQEIDENTIQGRKVKNRK 273
E + DE I K+ ++K
Sbjct: 303 ENNSSD-DEKEITISKITSKK 322
>At4g33750.1 68417.m04792 expressed protein
Length = 148
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKNKPV---------HDLSGTQI--EEIDANSDDDAPLEI 180
NT+EVNEN G+ ++ + + SGT I EE+DA +D +I
Sbjct: 69 NTTEVNENSRSEGDDDESGEKESSNIFSTELTEEADNTSGTSISQEEMDALTDPQTLPDI 128
Query: 181 SFKFNKNDNQE 213
+ N+ D +E
Sbjct: 129 RIEGNEEDEEE 139
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +1
Query: 22 NKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKN 201
N+ +N V E+ ED S GG+ K K +G EE++ D++ + + +KN
Sbjct: 80 NQKENEKHVEED-EDEEEISHGGEEKEKKSKVENGNHEEEVE--KDEEEEVAEDDEEDKN 136
Query: 202 DNQEPQCQEIDE 237
E +E +E
Sbjct: 137 KQGEEVAEEDEE 148
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +1
Query: 22 NKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKN 201
N+ +N V E+ ED S GG+ K K +G EE++ D++ + + +KN
Sbjct: 80 NQKENEKHVEED-EDEEEISHGGEEKEKKSKVENGNHEEEVE--KDEEEEVAEDDEEDKN 136
Query: 202 DNQEPQCQEIDE 237
E +E +E
Sbjct: 137 KQGEEVAEEDEE 148
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 4 KKRLSLNKIQNTSEVNEN---IEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPL 174
KK+ NK + ++ E+ E+ P K K KNK + T EE + ++++ P
Sbjct: 61 KKKKKKNKKRGDTDDGEDEAVAEEEPKKK---KKKNKKLQQRGDTNDEEDEVIAEEEEPK 117
Query: 175 EISFKFNKNDNQEPQCQEIDE 237
+ K K+ + + +E+++
Sbjct: 118 KKKKKQRKDTEAKSEEEEVED 138
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +1
Query: 34 NTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQE 213
N E +D S + K ++D + + EE D +S + + NK + +E
Sbjct: 384 NGKEATIEDDDKSVVSRKSEEKEVEMNDETDSNKEECDDSSCSEESESELCRLNKAELRE 443
Query: 214 PQCQEIDEN 240
CQ +D N
Sbjct: 444 AICQSMDNN 452
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Frame = +1
Query: 25 KIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEID-----------ANSDDDAP 171
+++ + E +ED +N+ D S I+EID + DD+
Sbjct: 1742 RLKEQGRIKELVEDRTHFCREKENRETEYEDGSSKMIQEIDKEESIEPVDRETSEDDEEE 1801
Query: 172 LEISFKFNKNDNQEPQCQEIDENT 243
LEI F+ + D + QE D ++
Sbjct: 1802 LEIEFEDEEEDWEAEVIQETDSDS 1825
>At1g72440.1 68414.m08377 CCAAT-box-binding transcription
factor-related similar to CCAAT-box-binding
transcription factor (CCAAT-binding factor) (CBF)
(Swiss-Prot:Q03701) [Homo sapiens], GB:P53569 [Mus
musculus]
Length = 1056
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 28 IQNTSEVNENIEDNP-AKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKND 204
I++ +V E + +P K+ +N + HD + D++SDD+ L I ++D
Sbjct: 646 IEHFEDVIEGDDVDPNKKAENDENVVEVDHDGVEKSSRDGDSSSDDEEALAIRLSDEEDD 705
Query: 205 NQEPQCQEIDEN 240
N +E+ N
Sbjct: 706 NASDDSEELIRN 717
>At4g16830.1 68417.m02540 nuclear RNA-binding protein (RGGA)
identical to nuclear RNA binding protein GI:6492264 from
[Arabidopsis thaliana]
Length = 355
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 318 EIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEK 446
E EKDV EKP + + NK+ +E + DE EK
Sbjct: 191 ETEKDVGEKPAVDDVAADANKEDTVVEEKEPEDKEMTLDEYEK 233
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 369 EENKKKKRKLAQENRNVPXNKDESEKK 449
E KKKK+++ + RN P +K +EKK
Sbjct: 454 ECTKKKKQRVRYKERNKPSDKSITEKK 480
>At1g56110.1 68414.m06443 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 522
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 303 QEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
+E + ++++ K + +++++KKKK K +E V +D+SEKK
Sbjct: 425 KEVIENLKQEEEGKEPVDA-SVKKSKKKKAKGEEEEEVVAMEEDKSEKK 472
>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
to p68 RNA helicase [Schizosaccharomyces pombe]
GI:173419
Length = 537
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 306 EAVHEIEKDVNEKPTS-EHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
E HE+E+ E E + KKKKRK ++ KD EKK+
Sbjct: 36 EENHEVEEVPQEVTNGVEEELSNKEKKKKRKREEKESEKNKKKDVPEKKL 85
>At5g42670.1 68418.m05198 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 294
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 318 EIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKKM 452
++ K +NE SE ++EE K++ + +E + P K +S++ +
Sbjct: 197 KLMKQLNEDQVSEAESMEEEKQRGAEPKEEEKQRPTEKLKSDEAL 241
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 27.1 bits (57), Expect = 9.0
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = +1
Query: 1 DKKRLSLNKIQNTSEVNENIEDNPAKSSGGKNKNKPVHDLSGTQIEE-----IDANSDDD 165
D+KR +K + E N ED+ +K K+ N V + + EE I +N+DDD
Sbjct: 296 DRKRKKSSKRNKSEEEEVNNEDHKSKKKKSKS-NTNVDQVETKKKEEHKEKTIPSNNDDD 354
Query: 166 APLEISFKFNKNDNQEPQCQEIDENTIQGRKVKNRKS 276
E K K + + ID+ ++ +R++
Sbjct: 355 DDAE---KKQKRATPKEELDAIDDAETSFAEIFSREN 388
>At5g19300.1 68418.m02300 expressed protein contains Pfam profile
PF02598: Uncharacterized ACR, COG2106
Length = 398
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 58 IEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKF-NKNDNQEPQCQEID 234
I D +K KNK K H+ + + E+ + D +I K NKN +EP+ +
Sbjct: 23 IIDGDSKKKKNKNKKKRSHEDTEIEPEQKMSLDGDSKEEKIKKKRKNKNQEEEPEL--VT 80
Query: 235 ENTIQGRKVKNRKSANV 285
E T KV+ + NV
Sbjct: 81 EKT----KVQEEEKGNV 93
>At5g14280.1 68418.m01670 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 572
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 324 EKDVNEKPTSEHFTLEENKKKKRKLAQEN 410
+K +++ SE T EE KKKK+K + N
Sbjct: 25 QKRTSKRTASETATEEETKKKKKKKTKHN 53
>At4g24090.1 68417.m03459 expressed protein
Length = 308
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +1
Query: 46 VNENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLE------ISFKFNKNDN 207
+ + EDN A SS G + + + G Q+EE+ + ++ L+ + + K +
Sbjct: 44 IRSSSEDNVAISSDGGDLKNSLSGIVGNQVEELLSREENKGLLDGLEKASLRVEIAKREL 103
Query: 208 QEPQCQEIDENTIQ 249
++ + QEI+ +Q
Sbjct: 104 EDIERQEIEAKLLQ 117
>At3g54760.1 68416.m06059 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor (Dentin phosphophoryn DPP,
Dentin sialoprotein DSP) [Homo sapiens]
Length = 792
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEKK 449
++E +IEKD+NE EEN+ + K E+ VP + K+
Sbjct: 168 EKETTKKIEKDINEMEVDSKQEDEENETEDAK-HSESAQVPEESTKLSKE 216
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKK---RKLAQENRNVPXNKDESEKK 449
++E +++ E+ T E E +K KK +K ++N+++ +D+ EKK
Sbjct: 1051 EKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKK 1103
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +1
Query: 49 NENIEDNPAKSSGGKNKNKPVHDLSGTQIEEIDANSDDDAPLEISFKFNKNDNQEPQCQE 228
+E ED+ +S GG K + H L + SDD+ E+ + ++D++E +E
Sbjct: 367 SEEEEDDDGESDGGDEKQRKGHHLEDWE------QSDDELGAELEDE-EEDDDEEDDDEE 419
Query: 229 IDENTIQGRKVKNRKSA 279
E + +K+KN +A
Sbjct: 420 DAELRVH-KKLKNDYAA 435
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 312 VHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDES 440
VHE+EK+V E S+ E + ++LA+ N + K ++
Sbjct: 289 VHELEKEVEESNRSKSSASESMESVMKQLAELNHVLHETKSDN 331
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTSEHFTLEENKKKKRKLAQENRNVPXNKDESEK 446
++E + E + N+K + EE KKK +K ++ N+D+ K
Sbjct: 165 EKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVK 213
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 300 DQEAVHEIEKDVNEKPTS--EHFTLEENKKKKRKLAQENRNVPXNK-----DESEKK 449
+ EA + E D EK S E EE KKKK+K ++N+ + DE EKK
Sbjct: 400 EPEAEKKEEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKK 456
>At1g15460.1 68414.m01858 anion exchange family protein member of
the PF|00955 Anion exchanger family
Length = 683
Score = 27.1 bits (57), Expect = 9.0
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 106 PVH--DLSGTQIEEIDANSDDDAPLEISFKFN--KNDNQEPQCQEIDENTIQGRKVKNRK 273
P H +L + EEI + PLE+SF+ N K QE + +DE T ++K R
Sbjct: 597 PAHLRELDAAEYEEIPGTPRN--PLELSFRSNDSKRGVQEGDAEILDELTTSRGELKVR- 653
Query: 274 SANVN 288
+ N+N
Sbjct: 654 TLNLN 658
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,538,244
Number of Sequences: 28952
Number of extensions: 201345
Number of successful extensions: 928
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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