Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0520
(570 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 143 1e-36
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 143 1e-36
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 131 4e-33
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 129 2e-32
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.4
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 22 3.2
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 21 7.4
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 143 bits (346), Expect = 1e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 140 bits (340), Expect = 6e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440
Query: 185 IQKESTLHLV 214
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 131 bits (317), Expect = 4e-33
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 185 IQKE 196
IQKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 129 bits (311), Expect = 2e-32
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = +2
Query: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 184
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYN
Sbjct: 49 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108
Query: 185 IQKE 196
IQKE
Sbjct: 109 IQKE 112
Score = 88.6 bits (210), Expect = 3e-20
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 89 KIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 214
KIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 486 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 400
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 486 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 400
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 486 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 400
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 486 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 400
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 486 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 400
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 567 FFFFLELHTVSRFI*IHIHRVASVSYRLEGTYL 469
F FF L V +F+ + HR ++++ L T L
Sbjct: 1330 FVFFFALILVIQFVAMLFHRFGTIAHILASTEL 1362
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 567 FFFFLELHTVSRFI*IHIHRVASVSYRLEGTYL 469
F FF L V +F+ + HR ++++ L T L
Sbjct: 1330 FVFFFALILVIQFVAMLFHRFGTIAHILASTEL 1362
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 567 FFFFLELHTVSRFI*IHIHRVASVSYRLEGTYL 469
F FF L V +F+ + HR ++++ L T L
Sbjct: 1330 FVFFFALILVIQFVAMLFHRFGTIAHILASTEL 1362
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 567 FFFFLELHTVSRFI*IHIHRVASVSYRLEGTYL 469
F FF L V +F+ + HR ++++ L T L
Sbjct: 1330 FVFFFALILVIQFVAMLFHRFGTIAHILASTEL 1362
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 230 HHEASTPGGGWIPSGYCSPR 171
HH P GG P G PR
Sbjct: 63 HHYGGPPSGGQPPQGMPYPR 82
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 22.2 bits (45), Expect = 3.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -3
Query: 256 NLLLAFLSATTKPQHQVE----GGFLLDIVVREGTSIFQLLSS 140
+L+ AFLS + + GGFLL VV+ G ++ LSS
Sbjct: 86 DLITAFLSVLPQLAWDITYRFYGGFLLCKVVKYGQTLGPYLSS 128
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 21.0 bits (42), Expect = 7.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 547 PHCVKIYLNPYTQSR 503
P CV +++ PY Q R
Sbjct: 131 PTCVAMFIVPYFQDR 145
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,995
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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