SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0519
         (608 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4TI68 Cluster: Chromosome undetermined SCAF2366, whole...    65   1e-09
UniRef50_O14735 Cluster: CDP-diacylglycerol--inositol 3-phosphat...    64   2e-09
UniRef50_UPI000065FDB0 Cluster: CDP-diacylglycerol--inositol 3-p...    63   4e-09
UniRef50_Q6NYP5 Cluster: CDP-diacylglycerol--inositol 3-phosphat...    62   1e-08
UniRef50_Q6BUR5 Cluster: Similar to sp|P06197 Saccharomyces cere...    55   1e-06
UniRef50_A1DBH6 Cluster: Phosphatidylinositol synthase; n=1; Neo...    53   5e-06
UniRef50_Q54P27 Cluster: Putative uncharacterized protein; n=1; ...    50   3e-05
UniRef50_Q10153 Cluster: Uncharacterized protein C1D4.08; n=2; A...    50   3e-05
UniRef50_P06197 Cluster: CDP-diacylglycerol--inositol 3-phosphat...    50   4e-05
UniRef50_Q8SX37 Cluster: RE35104p; n=4; Diptera|Rep: RE35104p - ...    48   1e-04
UniRef50_Q0CM69 Cluster: CDP-diacylglycerol--inositol 3-phosphat...    47   4e-04
UniRef50_Q9U2G1 Cluster: Putative uncharacterized protein pisy-1...    46   5e-04
UniRef50_A6QY05 Cluster: Putative uncharacterized protein; n=3; ...    45   0.002
UniRef50_A3FQQ0 Cluster: CDP-diacylglycerol--inositol 3-phosphat...    42   0.011
UniRef50_Q6KBS8 Cluster: Phosphatidylinositol synthase; n=1; Try...    41   0.020
UniRef50_UPI0000499628 Cluster: cdp-diacylglycerol--inositol 3-p...    41   0.026
UniRef50_Q5KCC1 Cluster: CDP-diacylglycerol-inositol 3-phosphati...    40   0.035
UniRef50_A7AU66 Cluster: Phosphatidylinositol synthase, putative...    36   0.75 
UniRef50_Q8LBA6 Cluster: CDP-diacylglycerol--inositol 3-phosphat...    36   0.99 
UniRef50_A3BBY4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q2MJB9 Cluster: Phosphatidylinositol synthase; n=7; Pla...    34   3.0  
UniRef50_A6RF53 Cluster: Predicted protein; n=1; Ajellomyces cap...    34   3.0  
UniRef50_A1HTX3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q5Q1M8 Cluster: Signal peptidase; n=4; Plasmodium (Vinc...    33   7.0  
UniRef50_Q4JBI5 Cluster: Conserved Archaeal membrane protein; n=...    32   9.3  

>UniRef50_Q4TI68 Cluster: Chromosome undetermined SCAF2366, whole
           genome shotgun sequence; n=3; cellular organisms|Rep:
           Chromosome undetermined SCAF2366, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 285

 Score = 64.9 bits (151), Expect = 1e-09
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLH 152
           ++G +SHK ID+S NPI+R YYT+K +LF MCA NE F+  LYVLH
Sbjct: 192 VKGSSSHKSIDLSGNPILRIYYTSKPVLFVMCAGNELFFCLLYVLH 237


>UniRef50_O14735 Cluster: CDP-diacylglycerol--inositol
           3-phosphatidyltransferase; n=22; Eumetazoa|Rep:
           CDP-diacylglycerol--inositol 3-phosphatidyltransferase -
           Homo sapiens (Human)
          Length = 213

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +3

Query: 9   AMLQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSG 164
           ++++G  SHK ID+S NP++R YYT++  LF +CA NE FY  LY+ HF  G
Sbjct: 112 SVVRGSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFHFSEG 163


>UniRef50_UPI000065FDB0 Cluster: CDP-diacylglycerol--inositol
           3-phosphatidyltransferase (EC 2.7.8.11)
           (Phosphatidylinositol synthase) (PtdIns synthase) (PI
           synthase).; n=1; Takifugu rubripes|Rep:
           CDP-diacylglycerol--inositol 3-phosphatidyltransferase
           (EC 2.7.8.11) (Phosphatidylinositol synthase) (PtdIns
           synthase) (PI synthase). - Takifugu rubripes
          Length = 224

 Score = 63.3 bits (147), Expect = 4e-09
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLH 152
           ++G +SHK ID+S NPI+R YYT+K +LF MCA NE F+  LY+L+
Sbjct: 133 IKGSSSHKLIDLSGNPILRIYYTSKPVLFLMCAGNELFFCLLYILY 178


>UniRef50_Q6NYP5 Cluster: CDP-diacylglycerol--inositol
           3-phosphatidyltransferase; n=6; Euteleostomi|Rep:
           CDP-diacylglycerol--inositol 3-phosphatidyltransferase -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 213

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = +3

Query: 9   AMLQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHF 155
           +M++G  SHK ID+S NPI+R YYT++ +LF+MC  NE F+  LY++ +
Sbjct: 112 SMMKGATSHKAIDLSGNPILRLYYTSRPVLFFMCMGNELFFCLLYIMFY 160


>UniRef50_Q6BUR5 Cluster: Similar to sp|P06197 Saccharomyces
           cerevisiae YPR113w PIS1; n=4; Saccharomycetales|Rep:
           Similar to sp|P06197 Saccharomyces cerevisiae YPR113w
           PIS1 - Debaryomyces hansenii (Yeast) (Torulaspora
           hansenii)
          Length = 225

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 23/49 (46%), Positives = 34/49 (69%)
 Frame = +3

Query: 12  MLQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFY 158
           M  G ASHK +D S++ I+  YYTN+ +LF +C  NE FY ++Y LH++
Sbjct: 130 MSSGSASHKNVDESQSKILSLYYTNRTVLFVVCLVNELFYVAIY-LHYF 177


>UniRef50_A1DBH6 Cluster: Phosphatidylinositol synthase; n=1;
           Neosartorya fischeri NRRL 181|Rep: Phosphatidylinositol
           synthase - Neosartorya fischeri (strain ATCC 1020 / DSM
           3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
           1020 / DSM 3700 / NRRL 181))
          Length = 234

 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%)
 Frame = +3

Query: 30  SHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKIYCNLSPNL 209
           SHK ID S   +MR YY+N+ +LF +C  NEAF+ +LY+L F S   SM  ++  LS  L
Sbjct: 139 SHKNIDESRPWVMRTYYSNQKVLFTVCTMNEAFFIALYLLAFSS--PSMPWLWLTLSSPL 196

Query: 210 PLTK 221
            L K
Sbjct: 197 MLFK 200


>UniRef50_Q54P27 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 207

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +3

Query: 9   AMLQ-GKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKI 185
           A LQ G  SHK +  +   IM+ YY NK+ L +MC  NE F+   Y+ HFY+  +  Y +
Sbjct: 111 ATLQSGSKSHKAVKENHIKIMKIYYGNKYFLAFMCFGNEGFFLFSYLYHFYATSSVFYIL 170

Query: 186 Y 188
           +
Sbjct: 171 W 171


>UniRef50_Q10153 Cluster: Uncharacterized protein C1D4.08; n=2;
           Ascomycota|Rep: Uncharacterized protein C1D4.08 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 251

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +3

Query: 18  QGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHF 155
           QG +SHK +    N ++R YY N  +LF  CA NE F+ +LY+L F
Sbjct: 134 QGASSHKTVTKKHNWMLRLYYGNNKVLFIFCAANEMFFVALYLLSF 179


>UniRef50_P06197 Cluster: CDP-diacylglycerol--inositol
           3-phosphatidyltransferase; n=7; Saccharomycetales|Rep:
           CDP-diacylglycerol--inositol 3-phosphatidyltransferase -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 220

 Score = 50.0 bits (114), Expect = 4e-05
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +3

Query: 21  GKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXT 170
           GK SHK +   E+ ++  YYT + +LF +CA NE FYA LY+  F +  T
Sbjct: 125 GKTSHKSVGEGESRLLHLYYTRRDVLFTICAFNELFYAGLYLQLFSNSAT 174


>UniRef50_Q8SX37 Cluster: RE35104p; n=4; Diptera|Rep: RE35104p -
           Drosophila melanogaster (Fruit fly)
          Length = 224

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
 Frame = +3

Query: 9   AMLQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSG----XTSM 176
           +++ G++SHK   +++N IMR YY  K +L +MC  NE FY  LY+LHF  G      S+
Sbjct: 115 SVVVGRSSHK---VNDNFIMRLYY-QKDILTFMCCVNELFYVCLYLLHFTYGPLIFGASL 170

Query: 177 YKIYCNLS 200
           +KI   L+
Sbjct: 171 FKILAFLT 178


>UniRef50_Q0CM69 Cluster: CDP-diacylglycerol--inositol
           3-phosphatidyltransferase; n=14; Pezizomycotina|Rep:
           CDP-diacylglycerol--inositol 3-phosphatidyltransferase -
           Aspergillus terreus (strain NIH 2624)
          Length = 300

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = +3

Query: 30  SHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYS 161
           SHK I+ S + I+  YY +K +LF  CA NEAF+  LY+L F S
Sbjct: 164 SHKKIEASRSWILYQYYHSKTVLFICCALNEAFFIGLYLLSFSS 207


>UniRef50_Q9U2G1 Cluster: Putative uncharacterized protein pisy-1;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein pisy-1 - Caenorhabditis elegans
          Length = 220

 Score = 46.4 bits (105), Expect = 5e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSG 164
           L G  SHK    S N ++  YYT++  L +MC  NEAFY  LY+  F++G
Sbjct: 120 LSGATSHK---QSSNWLLNLYYTDRLFLGFMCGGNEAFYILLYIRAFWAG 166


>UniRef50_A6QY05 Cluster: Putative uncharacterized protein; n=3;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Ajellomyces capsulatus NAm1
          Length = 337

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +3

Query: 30  SHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYS 161
           SHK +D S + I+  YY +K +LF  C  NE F+  LY+L F S
Sbjct: 185 SHKKVDSSRSWILYQYYNSKTVLFVFCLFNELFFIGLYLLSFSS 228


>UniRef50_A3FQQ0 Cluster: CDP-diacylglycerol--inositol
           3-phosphatidyltransferase isoform 1;
           phosphatidylinositol synthase; PtdIns synthase; PI
           synthase; n=2; Cryptosporidium|Rep:
           CDP-diacylglycerol--inositol 3-phosphatidyltransferase
           isoform 1; phosphatidylinositol synthase; PtdIns
           synthase; PI synthase - Cryptosporidium parvum Iowa II
          Length = 154

 Score = 41.9 bits (94), Expect = 0.011
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +3

Query: 21  GKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLY 143
           G +SHK I     PI++ YY+ K LLF + ACNEA +  LY
Sbjct: 48  GGSSHKSIKEEMWPILKLYYSKKPLLFTLHACNEALWLILY 88


>UniRef50_Q6KBS8 Cluster: Phosphatidylinositol synthase; n=1;
           Trypanosoma brucei|Rep: Phosphatidylinositol synthase -
           Trypanosoma brucei
          Length = 217

 Score = 41.1 bits (92), Expect = 0.020
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = +3

Query: 9   AMLQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKIY 188
           ++  G+ SHK +  S   ++R YYTN+  +  +C   E FY +LY+   Y      +  +
Sbjct: 122 SLYAGRTSHKDVSSSIFSLLRLYYTNRPFMCALCVGQELFYLNLYMYGVYGIAEPAFLFF 181

Query: 189 CNLSPNLPLTKFCCN 233
             L+  L   K   N
Sbjct: 182 MALTAALSAFKQVVN 196


>UniRef50_UPI0000499628 Cluster: cdp-diacylglycerol--inositol
           3-phosphatidyltransferase, putative; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: cdp-diacylglycerol--inositol
           3-phosphatidyltransferase, putative - Entamoeba
           histolytica HM-1:IMSS
          Length = 194

 Score = 40.7 bits (91), Expect = 0.026
 Identities = 22/58 (37%), Positives = 33/58 (56%)
 Frame = +3

Query: 9   AMLQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYK 182
           ++++G  SHK   +  NPI+  YYT   +LF +C CNEA +   Y+  F    T+ YK
Sbjct: 90  SLIKGGESHK---ICSNPILHWYYTRS-VLFTLCLCNEATFVMWYIRFF--AQTNEYK 141


>UniRef50_Q5KCC1 Cluster: CDP-diacylglycerol-inositol
           3-phosphatidyltransferase, putative; n=3;
           Basidiomycota|Rep: CDP-diacylglycerol-inositol
           3-phosphatidyltransferase, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 354

 Score = 40.3 bits (90), Expect = 0.035
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 9   AMLQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYS 161
           ++  G +SHK +    + I+  YY +   LF  C  NE F+  LY+ H+++
Sbjct: 213 SLTTGSSSHKTVTSDVSRILWYYYNDSRTLFVFCFANELFFVCLYLNHYWT 263


>UniRef50_A7AU66 Cluster: Phosphatidylinositol synthase, putative;
           n=1; Babesia bovis|Rep: Phosphatidylinositol synthase,
           putative - Babesia bovis
          Length = 208

 Score = 35.9 bits (79), Expect = 0.75
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMY 179
           L    +HK +    N  +R YY  +WL+F      E F+ +LY+   Y     +Y
Sbjct: 114 LYSNTNHKDVK-DANIFLRVYYHKRWLMFMSIVMYETFFCTLYIRSMYHPGDYIY 167


>UniRef50_Q8LBA6 Cluster: CDP-diacylglycerol--inositol
           3-phosphatidyltransferase 1; n=9; Magnoliophyta|Rep:
           CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1
           - Arabidopsis thaliana (Mouse-ear cress)
          Length = 227

 Score = 35.5 bits (78), Expect = 0.99
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKIYCN 194
           L GK+SHK +  S + + R YY N+  + Y C   E  Y  L ++        +  +   
Sbjct: 121 LAGKSSHKDVKDSTSWLFRLYYGNRIFMCYCCVSCEVLYIILLLIAKNQSENLLNVVVAT 180

Query: 195 LSPNLPLT 218
           L+   PL+
Sbjct: 181 LTQISPLS 188


>UniRef50_A3BBY4 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 190

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKIYCN 194
           L GK SHK +  + N +++ YY ++  + + C  +E  Y  L++       + +    C 
Sbjct: 81  LSGKTSHKDVKDTGNWLLKLYYGHRPFMAFCCVASEVLYIILFLFADEKSTSLLNVCRCF 140

Query: 195 LSPNLPLTKF 224
           L  + PLT F
Sbjct: 141 LKGS-PLTFF 149


>UniRef50_Q2MJB9 Cluster: Phosphatidylinositol synthase; n=7;
           Plasmodium|Rep: Phosphatidylinositol synthase -
           Plasmodium falciparum
          Length = 209

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKI-YC 191
           + G  +HK I+   N +++ YY   W++       E+F    Y+L      + +YK+ Y 
Sbjct: 116 IAGNKTHKKIEKG-NKLLKLYYEKPWVMVICIIAYESFLICAYLLRVAVKKSLIYKLSYY 174

Query: 192 NLSPNLPLTKF 224
            L  + PL  F
Sbjct: 175 ALICSFPLAAF 185


>UniRef50_A6RF53 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 330

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +1

Query: 1   RHEQCSRARL---LINSLTCLRILSCVPIT-PTNGSFSICVLAMKPSTHRCTFCTSI-QD 165
           R  QC R  +   L  +   +  L+ + +T PT    S  VLA KP T+RC +  SI   
Sbjct: 171 RSSQCKRTNMQPRLFKAAALVLFLTPLALTAPTENDASADVLACKPGTYRCAYQDSITSS 230

Query: 166 XQVC 177
            +VC
Sbjct: 231 IEVC 234


>UniRef50_A1HTX3 Cluster: Putative uncharacterized protein; n=1;
           Thermosinus carboxydivorans Nor1|Rep: Putative
           uncharacterized protein - Thermosinus carboxydivorans
           Nor1
          Length = 325

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 88  NGSFSICVLAMKPSTHRCTFCTSIQDXQVC-IKYTAICLL 204
           N  +  C+LA    T+ C FC+ +Q  +VC   +T IC+L
Sbjct: 12  NSDYCPCLLA---ETNHCVFCSHLQGKEVCDCNWTGICIL 48


>UniRef50_Q5Q1M8 Cluster: Signal peptidase; n=4; Plasmodium
           (Vinckeia)|Rep: Signal peptidase - Plasmodium yoelii
          Length = 346

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 84  NKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKIYCNLSPNLPLTKF 224
           N  +LFY+C C+  F+  L  +  Y+    +YKIY  +  NL    F
Sbjct: 170 NGVILFYICDCSLRFFNELRNIAIYNYINILYKIYNIIHRNLDNINF 216


>UniRef50_Q4JBI5 Cluster: Conserved Archaeal membrane protein; n=3;
           Sulfolobaceae|Rep: Conserved Archaeal membrane protein -
           Sulfolobus acidocaldarius
          Length = 466

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 359 SQAGTNFSNEIRTQQMFTIDFHGEGTASYNNNETRKIIICVITGGRTSCAVG 514
           S  GTNFS+      +  +   G G A+Y   ET+K    + TG + +  VG
Sbjct: 187 SPVGTNFSSLGTAMVLTIVSIAGAGAAAYLGEETKKPTSTITTGIKIAYVVG 238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,859,845
Number of Sequences: 1657284
Number of extensions: 11674836
Number of successful extensions: 25940
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25934
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -