Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0519
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110485-4|CAB60350.1|  220|Caenorhabditis elegans Hypothetical ...    46   2e-05
AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z82074-1|CAB04928.2|  480|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AL132864-6|CAB63395.1|  480|Caenorhabditis elegans Hypothetical ...    28   4.5  
AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical ...    28   4.5  
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p...    28   6.0  
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z68220-2|CAA92485.1|  234|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>AL110485-4|CAB60350.1|  220|Caenorhabditis elegans Hypothetical
           protein Y46G5A.5 protein.
          Length = 220

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = +3

Query: 15  LQGKASHKFIDMSENPIMRAYYTNKWLLFYMCACNEAFYASLYVLHFYSG 164
           L G  SHK    S N ++  YYT++  L +MC  NEAFY  LY+  F++G
Sbjct: 120 LSGATSHK---QSSNWLLNLYYTDRLFLGFMCGGNEAFYILLYIRAFWAG 166


>AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical
           protein Y41D4A.4 protein.
          Length = 580

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 78  YTNKWLLFYMCACNEAFYASLYVLHFYSGXTSMYKIY 188
           Y  +W  F  C  + AFY  +Y ++++   T MY ++
Sbjct: 503 YRWRWTSF-ACGASTAFYVYMYSMYYFFFKTKMYGLF 538


>Z82074-1|CAB04928.2|  480|Caenorhabditis elegans Hypothetical
           protein W06H12.1 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 601 GLKYSYNSCP-NPANRNALLLHGRK*AGGDTYRARGPTTSNYANYN 467
           G++++ + C  +   ++AL+LH +  A  D Y+ RG  T NY   N
Sbjct: 385 GMRFNCDKCKASYTQKHALMLHQKIHANPDAYQCRGCGT-NYTTQN 429


>Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical
           protein F36F2.6 protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 278 GSTWESRRGLKDKTSGAFVLSDAPLFESQAGTNFSNEIRTQQMFTIDFHGEG 433
           G+  E   GLK  + G+FVL D  L E +     + +I+T     + F G+G
Sbjct: 7   GNDAECTAGLKKASEGSFVLKDHVLIEFKINGKVAGKIKTPCEGVVTF-GKG 57


>AL132864-6|CAB63395.1|  480|Caenorhabditis elegans Hypothetical
           protein W06H12.1 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 601 GLKYSYNSCP-NPANRNALLLHGRK*AGGDTYRARGPTTSNYANYN 467
           G++++ + C  +   ++AL+LH +  A  D Y+ RG  T NY   N
Sbjct: 385 GMRFNCDKCKASYTQKHALMLHQKIHANPDAYQCRGCGT-NYTTQN 429


>AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical
           protein Y41D4B.16 protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 93  LLFYMCACNEAFYASLYVLHFYSGXTSMYKIYCNLSPNLPLT 218
           L+FY  +     YA ++ L FY+  T   KI C     + LT
Sbjct: 9   LIFYCISSTLGSYARMHSLRFYTNNTVPVKIECEDGSKIYLT 50


>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
           protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 134 CVEGFIASTHIEKEPFVGVIGTHDRILRHVNEFMRSLA 21
           C+  F ASTHI +   +        ILRHV ++++ +A
Sbjct: 652 CLVAFRASTHIVEAGIIFSSAQLQSILRHVVDYVKKIA 689


>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
           protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 134 CVEGFIASTHIEKEPFVGVIGTHDRILRHVNEFMRSLA 21
           C+  F ASTHI +   +        ILRHV ++++ +A
Sbjct: 652 CLVAFRASTHIVEAGIIFSSAQLQSILRHVVDYVKKIA 689


>Z68220-2|CAA92485.1|  234|Caenorhabditis elegans Hypothetical
           protein T20D3.2 protein.
          Length = 234

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = +1

Query: 67  CVPITPTNGSFSICVLAMKPSTHRCTFCTSIQDXQVCIK--YTAIC 198
           C+   PT  +++ C+     +     FC ++Q    C+   Y A C
Sbjct: 157 CLGTFPTTNAYNSCIQNFNQTVSAGNFCPAVQQTGSCLNDAYNAAC 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,069,509
Number of Sequences: 27780
Number of extensions: 292028
Number of successful extensions: 708
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)