Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0517
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    25   0.38 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    25   0.38 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.6  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 57  KGTFCLWFCNELN*ILVSRN 116
           KG   +W CN L+  L SRN
Sbjct: 232 KGRVAVWMCNNLHKALESRN 251


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 57  KGTFCLWFCNELN*ILVSRN 116
           KG   +W CN L+  L SRN
Sbjct: 232 KGRVAVWMCNNLHKALESRN 251


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/30 (30%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 180 TRFVNQNAQIFKLTTRLHNALDFLKP-KFN 94
           T F    + +F++   +++A+DFL+  +FN
Sbjct: 604 TPFKELTSNVFRMNQFVYDAIDFLREFQFN 633


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 598 IKITIWFFLSRVPVGLIPFVGXKFILYKSLVFYLSI 491
           I ITI+FF + V  G + F+     +  ++ F + +
Sbjct: 538 IVITIFFFTANVQAGELYFMSLLNPILSNVTFVIDV 573


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 598 IKITIWFFLSRVPVGLIPFVGXKFILYKSLVFYLSI 491
           I ITI+FF + V  G + F+     +  ++ F + +
Sbjct: 263 IVITIFFFTANVQAGELYFMSLLNPILSNVTFVIDV 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,785
Number of Sequences: 336
Number of extensions: 2757
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)