Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0517
         (608 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g59950.1 68414.m06753 aldo/keto reductase, putative similar t...    27   7.4  
At3g55400.1 68416.m06153 methionyl-tRNA synthetase / methionine-...    27   9.7  

>At1g59950.1 68414.m06753 aldo/keto reductase, putative similar to
           NADPH-dependent codeinone reductase GI:6478210 [Papaver
           somniferum], NAD(P)H dependent 6'-deoxychalcone synthase
           [Glycine max][GI:18728]
          Length = 320

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +1

Query: 457 LHHIISIAKVPQSINK 504
           L HI+SIAK+P S+N+
Sbjct: 170 LQHILSIAKIPPSVNQ 185


>At3g55400.1 68416.m06153 methionyl-tRNA synthetase /
           methionine--tRNA ligase / MetRS (cpMetRS) identical to
           methionyl-tRNA synthetase MEtRS [Arabidopsis thaliana]
           GI:2266985
          Length = 616

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 147 KLTTRLHNALDFLKPKFN 94
           ++ T LHNAL FLKP FN
Sbjct: 4   RINTSLHNALSFLKP-FN 20


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,360,965
Number of Sequences: 28952
Number of extensions: 201049
Number of successful extensions: 275
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)