Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0516
(625 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 166 1e-41
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 65 4e-11
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 62 4e-10
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 62 4e-10
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 62 5e-10
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 61 8e-10
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 60 1e-09
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 60 2e-09
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 58 6e-09
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 57 1e-08
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 55 4e-08
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 54 7e-08
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 54 9e-08
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 53 2e-07
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 53 2e-07
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 52 3e-07
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 52 4e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 52 5e-07
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 51 7e-07
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 51 9e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 49 3e-06
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 49 4e-06
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 47 1e-05
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 46 2e-05
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 45 4e-05
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 45 4e-05
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 45 4e-05
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 45 6e-05
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 43 2e-04
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 40 0.002
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 39 0.004
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 39 0.004
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 38 0.005
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 38 0.005
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 38 0.007
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 38 0.009
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 38 0.009
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 37 0.015
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 37 0.015
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 36 0.020
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 36 0.027
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.027
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 36 0.035
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 35 0.047
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 35 0.047
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 35 0.062
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 35 0.062
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 34 0.082
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 33 0.25
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 32 0.33
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 31 1.0
SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) 30 1.3
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 30 1.8
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 29 2.3
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 2.8
SB_42508| Best HMM Match : Peptidase_U57 (HMM E-Value=4.2) 29 3.1
SB_57720| Best HMM Match : DUF222 (HMM E-Value=3.3) 29 3.1
SB_57304| Best HMM Match : SRP9 (HMM E-Value=0.7) 29 3.1
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 29 4.1
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_6693| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 5.4
SB_44764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_9653| Best HMM Match : Retrotrans_gag (HMM E-Value=0.05) 27 9.4
SB_50078| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_13336| Best HMM Match : Pox_A32 (HMM E-Value=0.049) 27 9.4
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 166 bits (404), Expect = 1e-41
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERFQSLGVAFYRGADCCVLVFDVT PN+FK+L+SWRDEFLIQASPRDP+NFPFV+L
Sbjct: 4 TAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFVVL 63
Query: 436 GNKVDLDNRAVSVKRGQQWCQSKN 507
GNK+DL+NRAVS KR Q WC SKN
Sbjct: 64 GNKIDLENRAVSAKRAQAWCHSKN 87
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 510 IPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEF 623
IPYFETSAKEA+NVE AFQTIA+NALAQET+ ELYN+F
Sbjct: 89 IPYFETSAKEAINVEQAFQTIAKNALAQETDVELYNDF 126
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 102 bits (245), Expect = 2e-22
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+SL FYRG+D C+LV+ V +F +L W+ EFL A RD DNFPF++L
Sbjct: 267 TAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILL 326
Query: 436 GNKVDLDNRAVSVKRGQQWCQ 498
GNKVD++ RAVS + WC+
Sbjct: 327 GNKVDVEGRAVSQEEADSWCR 347
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 113 DSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
D GVGK+SLMN+FV KF Q TIG +FL K+V +D T+QIW
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIW 265
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 510 IPYFETSAKEAVNVELAF 563
+PYFETSAK++ NV AF
Sbjct: 352 VPYFETSAKDSTNVNDAF 369
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 247
M+S L K++++GDSGVGK+SL+ +F + FSN Y +TIG DF + + VD + + +Q
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQ 60
Query: 248 IW 253
IW
Sbjct: 61 IW 62
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF++L A+YR A VL++DV TF L W +E S + +++
Sbjct: 64 TAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEE----VSEYACEGVNTILV 119
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKNASRI 519
GNK DL D R V +++ + + S I
Sbjct: 120 GNKCDLIDCRQVGYNTAKEFAEKLDISFI 148
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTIARNALAQ 593
E+ I + ETSAK++ NVE F+T+A A+
Sbjct: 141 EKLDISFIETSAKDSTNVESVFRTMAAELKAK 172
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 64.1 bits (149), Expect = 9e-11
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K++ LGD GVGK+SL +F+ F +Y+ TIG DF+TK V++DD V +QIW
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIW 217
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+ L ++ R ++ ++VFD+T +F+S+ W + + +I+
Sbjct: 219 TAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDW----VKMVRDERGEKAVIIIV 274
Query: 436 GNKVD-LDNRAVS 471
GNK+D D R VS
Sbjct: 275 GNKMDESDRRKVS 287
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L KV+++GDSGVGK++L+++F +F+ + K+TIG +F T+ + VD + + QIW
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 62.1 bits (144), Expect = 4e-10
Identities = 23/55 (41%), Positives = 41/55 (74%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K++++GDSGVGK+SL+++F +F + K+TIG +F T+ + V+ +I+ Q+W
Sbjct: 12 LYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVW 66
Score = 54.8 bits (126), Expect = 5e-08
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA VLV+D+T TF+ +E W E A P +++
Sbjct: 68 TAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADP----TIVVMLV 123
Query: 436 GNKVDLDN-RAVS 471
GNK DL + RAV+
Sbjct: 124 GNKCDLKHLRAVA 136
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++YRGA +LV+D+++ TF SL +W + ASP N +++
Sbjct: 151 TAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASP----NIVIILV 206
Query: 436 GNKVDLD-NRAVSVKRGQQWCQ 498
GNK DLD +R V+ ++ Q
Sbjct: 207 GNKKDLDADREVTFLEASRFAQ 228
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 60.9 bits (141), Expect = 8e-10
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER+ SL +YRGA ++V+D+T +TF ++W E QASP N +
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASP----NIVIALS 132
Query: 436 GNKVDL-DNRAVSVKRGQQWCQ 498
GNK DL R V + Q + +
Sbjct: 133 GNKADLASKRMVEYEDAQSYAE 154
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ V +DD V +IW
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER+ S+ A++RG LVFD+T TF L W D L + + N +++
Sbjct: 408 TAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWID--LARTTSGADSNIQLILV 465
Query: 436 GNKVDL-DNRAVSVKRGQQW 492
GNK D+ DNRAV+ R +++
Sbjct: 466 GNKKDMEDNRAVTYSRAKEF 485
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQY-KATIGA-DFLTKEVIVDDRIVTMQI 250
K +I+G+SGVGK+ L+N+ N F ++ +T+ D + + D++ + + I
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTI 405
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+SL +YR A +LV+D+T +TF SL W E L + P+D +
Sbjct: 16 TAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRE-LQRYGPQD---IVIAVA 71
Query: 436 GNKVD-LDNRAVSVKRGQQWCQSKNA 510
GNK D D R V V+ Q + S +A
Sbjct: 72 GNKCDKADQRDVQVQDAQDFAGSVDA 97
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQE+F L +Y C +++FDVT+ T+K++ +W + R +N P V+
Sbjct: 88 TAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-----ERVCENIPIVLC 142
Query: 436 GNKVDLDNRAVSVK 477
GNKVD+ +R V K
Sbjct: 143 GNKVDIKDRKVKAK 156
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 86 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 199
+++ + +GD G GKT+ + + + +F +Y AT+G +
Sbjct: 31 IVVSFLQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 68
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF ++ A+YRGA +LV+DVT +F ++ W L + ++ +++
Sbjct: 12 TAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKW----LKKIDDHANEDVKRMLV 67
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKNASRI 519
GNK D+ D R +S +G+Q S S I
Sbjct: 68 GNKCDMYDKRVISQTKGEQLASSYGISFI 96
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 259 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILG 438
AGQERF+++ ++YRGA ++V+D+T ++ +L W E AS + +++G
Sbjct: 376 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYAS----EGVHMILVG 431
Query: 439 NKVDLD-NRAVSVKRGQQW 492
NK+DLD +R V Q+W
Sbjct: 432 NKIDLDTDREVQPDAAQEW 450
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +1
Query: 259 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILG 438
AGQERF S+ +Y+GAD CV++FD+ T W+ + + P +++G
Sbjct: 76 AGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVG 135
Query: 439 NKVDLDNRAVSVKRGQQWCQ 498
NK DL +R V + + C+
Sbjct: 136 NKSDLPDRPVDKEIIDKLCK 155
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIWVL 259
KV+++GD GK S + ++VN + YK TIG DF K + + + +QIW++
Sbjct: 20 KVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLI 75
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF++L ++YRGA +LV+D + TF LE W +E + ++ +D +++
Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKD---IVKMLV 120
Query: 436 GNKVD 450
GNK+D
Sbjct: 121 GNKID 125
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
LK++I+G+SGVGK+SL+ +F + F ATIG DF K + V+ + IW
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIW 62
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +1
Query: 265 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 444
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 445 VDLDN-RAVSVKRGQQWCQSKNASRILRQVPKKLS 546
DL + R + +RG C S +L + P + S
Sbjct: 58 SDLKHLRMIENRRGSNSC-SPGDPLVLERPPPRWS 91
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 295 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNKVDLDNRAVS 471
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NKVD R V
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRKRLVE 69
Query: 472 VKRGQQWCQS 501
G+QW ++
Sbjct: 70 ESEGRQWAEN 79
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 444
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 445 VDLDN-RAVSVKRGQQW 492
DL + R + +RG+Q+
Sbjct: 58 SDLKHLRMIENRRGKQF 74
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQE+F+ + ++YR AD +LVFD+T TF S+ W L+ N V++
Sbjct: 67 TAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQW----LMNVQKYTNKNILKVLV 122
Query: 436 GNKVDL 453
GNK DL
Sbjct: 123 GNKTDL 128
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 83 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K KV+++GD GVGKTSL+ +F F + +T+G D T+ + + V +Q W
Sbjct: 9 KYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCW 65
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/55 (38%), Positives = 38/55 (69%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ KV+ +GDSGVGK+S +++F + ++ + ATIG DF K + V+ + + +Q+W
Sbjct: 896 VFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++R AD ++ +DVTA ++F +L+ W ++ + ++L
Sbjct: 952 TAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKW----MVSVEEGAEEGVAKMVL 1007
Query: 436 GNKVDL 453
GNK DL
Sbjct: 1008 GNKTDL 1013
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K+I++GD+ VGKT L+ QF F TIG DF K V VD V +QIW
Sbjct: 7 LFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIW 61
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++Y AD ++ +D+T +F+SL W D+ + + I+
Sbjct: 63 TAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDD----TNRYTSKDVLIAIV 118
Query: 436 GNKVDLD-NRAVSVKRGQQWCQSKNASRILRQVPKKLSM 549
GNK DL NR V + + K RQ+ K+L+M
Sbjct: 119 GNKSDLSTNRKVDFHHAKLLLKKKTLLHWRRQL-KRLTM 156
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE F ++ + R + +LVF VT ++F+ + + ++ L +D FP +
Sbjct: 64 LDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQIL---RVKDRTEFPMI 120
Query: 430 ILGNKVDLD-NRAVSVKRGQQWCQSKNASRILRQVPKK 540
I GNK DL+ R VS GQ+ ++ I++ VP +
Sbjct: 121 ICGNKSDLEYERTVSTAEGQE--LARQLREIIKLVPDR 156
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
K++++G GVGK++L QF+ F + Y TI D K+ ++D+R+ + I
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTI-EDSYRKQCVIDERVAHLDI 63
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/55 (38%), Positives = 38/55 (69%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V +D+ V +QIW
Sbjct: 21 MFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIW 75
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/37 (40%), Positives = 29/37 (78%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLE 366
TAGQER++++ A+YRGA +L++D+T +F++++
Sbjct: 77 TAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K++++GDSGVGK++L++++ +F KATIG + + V ++ + V QIW
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIW 72
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 80 KKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 220
K+ L+K + LGDSGVGKTSL+ Q+ + F+ ++ TIG DF K V+
Sbjct: 103 KEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVV 149
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 414
TAGQERF+SL AF+R A +LVFD+T +F ++ +W + A +PD
Sbjct: 173 TAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYCENPD 225
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/85 (29%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++YR C++++D+T ++F ++ W E + F+++
Sbjct: 70 TAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKE---AKQCVEEAEVVFMLV 126
Query: 436 GNKVDLDN-RAVSVKRGQQWCQSKN 507
G+K+D ++ R VS + G+ + ++ N
Sbjct: 127 GHKIDKESKRVVSTEEGECFAEAHN 151
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIW 253
++I++GDS VGK+SL+ QF +F T+G DF + + + D + +QIW
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIW 68
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ ++YRGA ++V+DVT +F +++ W E A +N +++
Sbjct: 85 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAC----ENVNKLLV 140
Query: 436 GNKVDLDNRAV 468
GNK DL + V
Sbjct: 141 GNKCDLTTKKV 151
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 21/83 (25%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFV---------------------NKKFSNQYKA 184
M+ L K++++GDSGVGK+ L+ +F + ++ Y +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYIS 60
Query: 185 TIGADFLTKEVIVDDRIVTMQIW 253
TIG DF + + +D + + +QIW
Sbjct: 61 TIGVDFKIRTIELDGKTIKLQIW 83
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 510 IPYFETSAKEAVNVELAFQTIA 575
+P+ ETSAK A NVE AF T+A
Sbjct: 166 VPFLETSAKNATNVEQAFMTMA 187
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ +++R AD +L++DVT +F + W + I+ S P P ++
Sbjct: 498 TAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVE--AIEESCSKP--VPIMLC 553
Query: 436 GNKVDLDNRAVS 471
GNK+D+ A +
Sbjct: 554 GNKIDIRQSAAA 565
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K+++ GD+ VGK+S + + +F + +T+G DF K ++VD + +Q+W
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLW 496
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ KV++LGD VGK+SL+ +F + +F+ Q TIG DF + +D + V +Q+W
Sbjct: 10 VFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLW 64
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAG+E++++L +F+RGAD +LVFDV+ +F S+ RD +L + + +++
Sbjct: 66 TAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSI---RDYWLHEFHKVSGSDTITILV 122
Query: 436 GNKVDLDNRAVSVKRGQQWCQSKNAS 513
GNK D ++ VS + Q N S
Sbjct: 123 GNKCDKKDKKVSEEDIQNLSSCYNLS 148
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ ++YR + ++ +D+T +TFK++ W ++ A P+N +++
Sbjct: 102 TAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYA----PENAIKLLV 157
Query: 436 GNKVDLD-NRAVSVK 477
GNK DL+ R VS++
Sbjct: 158 GNKKDLEREREVSLE 172
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 522 ETSAKEAVNVELAFQTIAR 578
ETSAK+A N+E AF +AR
Sbjct: 188 ETSAKDATNIEAAFYRLAR 206
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K+II+GDS VGKT L + KF + + TIG DF K + ++ V +Q+W
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLW 100
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TAGQERFQ-SLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 432
TAGQERF+ S+ +YR + V ++D+T +F++L +W E+ A D P ++
Sbjct: 102 TAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGD---VPKIL 158
Query: 433 LGNKVDLD-NRAVSVKRGQQWCQSKN 507
+GNK DL R VS +++ S N
Sbjct: 159 IGNKCDLGLERTVSSNIARKFADSHN 184
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/71 (33%), Positives = 44/71 (61%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ +YRG ++V+DVT+ +TF +++ W E ++ D+ +++
Sbjct: 33 TAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEI-----DQNCDDVIRILV 87
Query: 436 GNKVDLDNRAV 468
GNK D ++ V
Sbjct: 88 GNKDDCPSKKV 98
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 164 FSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
FS Y TIG DF + + +D V +QIW
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIW 31
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVE 554
EQ I FETSAKE +NVE
Sbjct: 109 EQMNIRVFETSAKENINVE 127
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L KV++LG++GVGKTSL + F+ + TIG D +K V + ++ VT+ +W
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVW 65
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW---RDEFLIQASPRDPDNFPF 426
TAG ERF+++ +YRGA C+L+F+V P + + L W DEF PD
Sbjct: 67 TAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFC-------PDALK- 118
Query: 427 VILGNKVDLDNRAVS 471
V++ NK+DLD + +
Sbjct: 119 VLVANKIDLDEQVTT 133
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/38 (50%), Positives = 31/38 (81%)
Frame = +2
Query: 77 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
R++ L KV+++GD GVGKTSL+ ++V++ FS Y+AT+
Sbjct: 667 RREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 280 SLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 450
S + +Y+ A +VFDVT +TF +++ W+++ + + P V+L NK D
Sbjct: 705 SFNIVYYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCD 761
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 510 IPYFETSAKEAVNVELAFQTIARNALAQETE 602
I +FETSAKE VNV A + + L E E
Sbjct: 784 IGWFETSAKEDVNVNEAAKFLVSKILQNEKE 814
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/83 (27%), Positives = 48/83 (57%)
Frame = +2
Query: 65 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTM 244
K SS + ++KV+I+G+ GVGK++L +F+ K+F +Y T+ + + ++ V +V +
Sbjct: 853 KASSHQGRIVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAI 911
Query: 245 QIWVLLAKNGSNRLE*LSIVGRI 313
++ +N +LE +G +
Sbjct: 912 ELTDTAGENSPAKLERCLEIGEV 934
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/57 (35%), Positives = 38/57 (66%)
Frame = +2
Query: 83 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
++ + VI++GDS GKT+L+N +V +F+ +Y+AT+ + L+ V VD + + +W
Sbjct: 230 QIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLW 285
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKS-LESWRDEFLIQASPRDPDNFPFVI 432
T+G E + + Y D ++ FD++ P T S LE W +I+ P N P ++
Sbjct: 287 TSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKW----IIEVCDLCP-NKPVLL 341
Query: 433 LGNKVDLDNRA-VSVKRGQQWCQ 498
+G K DL + + K + CQ
Sbjct: 342 VGCKQDLRSEVNIVSKLASKVCQ 364
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 217
+ +V++LG GVGKTSL+ +F++ FS QY T+G D K V
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSV 148
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTF-KSLESWRDEFLIQASPRDPDNFPF 426
M TAG F ++ + AD VLV+ V + ++LE R+ I+ P
Sbjct: 161 MDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGK-----TVPM 215
Query: 427 VILGNKVDL 453
V++GNK DL
Sbjct: 216 VLVGNKTDL 224
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
KV++LG GVGK++L QFV +F +Y TI DF KE+ VD+ ++I
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEI 55
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAG E+F S+ + + +LV+ + TF L+ R + L + +N P V
Sbjct: 56 LDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENVPIV 112
Query: 430 ILGNKVDL-DNRAVSVKRGQQW-------CQSKNASRILRQVP 534
++GNK D+ D R VS + + C + +RQVP
Sbjct: 113 LVGNKSDIYDEREVSTSNAKTFLETNKDGCDEARSLHAMRQVP 155
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKNG 274
++ +LGD GVGKT+L+ +F+ +F +Y TI D K + +DD VT++I + A G
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTI-EDKYRKSINIDDVTVTLEI-LDTASRG 64
Query: 275 SN 280
N
Sbjct: 65 QN 66
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Frame = +1
Query: 247 NMGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 426
+M TAG+E++ L + RGA ++ +D+T ++ K L R L+QA+ +P N
Sbjct: 276 SMDTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLND-RHLHLLQAA--EP-NCLV 331
Query: 427 VILGNKVDL---DNRAVSVKRGQQWCQSKN 507
VI+G K DL D R ++ G + + +N
Sbjct: 332 VIVGCKKDLVTDDTREITEAAGMELAKVQN 361
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ T+G E ++ L + + DC V F + P++ SLE W ++FL D
Sbjct: 68 LDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFL-DVFLGDSSRVLKF 126
Query: 430 ILGNKVDLDNRA 465
+LG K+D + A
Sbjct: 127 VLGCKIDTQHEA 138
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 193
S+ ++L KV+I+GD+ VGKTS + ++V+ +YK TIG
Sbjct: 16 STMSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAG E+F S+ + + +LV+ + TF L+ R + L + +N P V++
Sbjct: 42 TAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENVPIVLV 98
Query: 436 GNKVDL-DNRAVSV 474
GNK D+ D R VSV
Sbjct: 99 GNKSDIYDEREVSV 112
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKNG 274
KV++LG GVGK++L QFV +F +Y TI DF ++ +M+ L KNG
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFY--HTAGTEQFASMR--DLYIKNG 59
Query: 275 SNRLE*LSIVGR 310
L S++ R
Sbjct: 60 QGFLLVYSLINR 71
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 77 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT 187
RKK LK +I+GD GVGKTSL+ ++ F N Y T
Sbjct: 14 RKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT 50
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 319 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQWC 495
+LV+D+T ++FK + W ASP N V+LGNK+D D R + +RG+
Sbjct: 6 LLVYDITTEDSFKHISQWLQNIEDNASP----NVCKVLLGNKLDAEDERVIDAQRGRSVG 61
Query: 496 QSKN 507
+ N
Sbjct: 62 EDNN 65
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 492 VPEQERIPYFETSAKEAVNVELAFQTIARNALAQ 593
V E + ++E SA+ NV+ AF +AR Q
Sbjct: 60 VGEDNNLEFYEASARTGENVQQAFMAVARKIKEQ 93
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 295 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNK 444
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NK
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANK 55
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +2
Query: 98 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 193
+++LG +GVGKT+L+ +FV +F N+Y T+G
Sbjct: 327 MVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
M ++ L ++ + G +GVGKTS++ +F KFS +Y+ T+
Sbjct: 1 MKEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV 41
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +2
Query: 59 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI 235
L K SS L + +LG+ VGK+SL+ F + F +Y TI +F++K ++ +D++
Sbjct: 17 LGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHLLYNDQL 74
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 98 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
++ G S VGKTSL+ +F+ F++ Y TI DF K V ++ +QI
Sbjct: 31 IVFFGASSVGKTSLILRFLGYAFNDDYSPTI-EDFFIKHVFFNNETYELQI 80
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
T+G F ++ D VLV+ P +F L +R E L R P +++
Sbjct: 83 TSGTYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNR----HPCIVV 138
Query: 436 GNKVDL 453
NK DL
Sbjct: 139 CNKNDL 144
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +1
Query: 238 YDANM-GTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 414
YD + TAGQE + S + D +++F + + +++ L+ R + + + +
Sbjct: 2633 YDIEVVDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTT 2692
Query: 415 -NFPFVILGNKVDLDNRAVSVKRGQQWCQSKNASRILRQVPKKLS 546
P VI+GNK+ N S + Q Q N + + R +PK S
Sbjct: 2693 CTIPMVIVGNKMTGLNVRESFQLMMQQIQKINPALLERTIPKNAS 2737
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKNG 274
K++I+GD GKT L+ F +F Y T+ +++ ++ VD + V + +W +
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 5989
Query: 275 SNRLE*LS 298
+RL LS
Sbjct: 5990 YDRLRPLS 5997
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVI 432
TAGQE + L Y D ++ F + +P++ +++ E W E + P N P ++
Sbjct: 5984 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIIL 6038
Query: 433 LGNKVDL 453
+GNK DL
Sbjct: 6039 VGNKKDL 6045
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 193
L+V++LG GVGK++L + + K+F +Y +T+G
Sbjct: 17 LRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 307 ADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKRG 483
A+ +LV+D+T TF ++ W A+ ++ +ILGNK D+D+ R VS +RG
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHAN----EDVEKMILGNKCDMDDRRIVSRERG 180
Query: 484 QQ 489
+Q
Sbjct: 181 EQ 182
Score = 35.5 bits (78), Expect = 0.035
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
L K++++GDSGVGKT ++ +F + F+ + +TI
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 492 VPEQERIPYFETSAKEAVNVELAFQTIARNALAQE 596
+ + I + ETSAK +N+E AFQ +A++ L +E
Sbjct: 183 IAREHGIRFLETSAKTNINIEQAFQYLAQDILKKE 217
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 226
K+ ILG GVGKTSL+ F KFS ++ T+ D+ V +D
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMD 56
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K++++GD GVGK++ + F +Y T+ D + +++D + + +W +
Sbjct: 6 VKLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQE 64
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 65 DYDRLRPLS 73
Score = 35.1 bits (77), Expect = 0.047
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQE + L Y D ++ FD+ + +F+++ES ++L + + P+ P +++
Sbjct: 60 TAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIES---KWLPELNHHMPET-PKILV 115
Query: 436 GNKVDL 453
GNK DL
Sbjct: 116 GNKRDL 121
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 36.7 bits (81), Expect = 0.015
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +1
Query: 238 YDANM-GTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 414
YD + +AGQE + S + D +++F + + +++ L+ R + + + +
Sbjct: 23 YDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHKESNTT 82
Query: 415 -NFPFVILGNKVDLDNRAVSVKRGQQWCQSKNASRILRQVPKKLS 546
P VI+GNK+ N S + Q Q N + + R +PK S
Sbjct: 83 CTIPMVIVGNKMTGLNVRESFQLMMQQIQKINRALLERTIPKNAS 127
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 68 MSSRKK--LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGA 196
M RKK LLKV+++GDS VGKT L+ F+ ++ Q T G+
Sbjct: 3 MKPRKKQDYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAGS 47
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 319 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQWC 495
++ +DV+ +F + W + ++ + +N P ++ K DL R +S K+G+ +
Sbjct: 66 IVAYDVSNEQSFNACNKWLER--CRSLAKSDNNLPGALIATKTDLKQRRVISTKQGKDYA 123
Query: 496 QSKN 507
SKN
Sbjct: 124 NSKN 127
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 86 LLLKVIILGDSGVGKTSLMNQFVN--KKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L KV++ GDS VGK++L+ F + + Y T+GA+ L K V + + T +W
Sbjct: 4 LRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPE--TTDSVW 59
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 295 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAVS 471
+YRGA +LV+D+ T++++E W E A N +++GNK DL + RAV
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDLRHLRAVP 57
Query: 472 VKRGQQWCQ 498
+ + +
Sbjct: 58 TDEAKAFAE 66
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
K+ ILG S VGKTSLM K F+N++ TI
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTI 220
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 262 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 441
GQ RF+S+ + RG +C V + D LE+ ++E P ++LGN
Sbjct: 74 GQPRFRSMWERYCRGVNCIVYMVDAA---DHDKLEASKNELHNLLEKPQLAGIPILVLGN 130
Query: 442 KVDLDN 459
K DL N
Sbjct: 131 KKDLPN 136
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + KF ++Y T+ D V++ T+ ++ +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 63 DYDRLRPLS 71
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 223
L KV+ G GVGKTSL + ++KF + + D KEV+V
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKFYGKESRDMTPDICVKEVVV 71
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 295 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD-NRAVS 471
+ R + ++++ +T ++F ++D+ R D+ P V++GNK DL+ R V+
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQI---ERVRRTDDIPIVLVGNKDDLEGKREVT 61
Query: 472 VKRGQQ 489
+ GQ+
Sbjct: 62 TQEGQE 67
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
M S ++V++LG GVGK++L +F+ ++F +Y T+
Sbjct: 9 MHSNTTKPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTL 49
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 319 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQ 489
+LV+D+T +F+ ++W AS +D + ++LGNK D+ D R VS +RG+Q
Sbjct: 89 MLVYDITNDKSFEKHQNWIRNIEEHAS-QDVEK---MVLGNKCDMEDRRQVSKERGEQ 142
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 34.3 bits (75), Expect = 0.082
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
T G + L Y+G+D +L FD++ TF+ +ES ++L + + P + V++
Sbjct: 59 TEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIES---KWLPETTQVLPGSIR-VLI 114
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKNA 510
GNK D+ R +RG+ S N+
Sbjct: 115 GNKNDIRKTRQDKDRRGKVLKMSSNS 140
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLM 142
M+S +KL KV++ GD+ VGKTS +
Sbjct: 1 MASERKL--KVVLTGDNNVGKTSFL 23
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKK--FSNQYKATIGADFLTKEVIVDDRIVTMQI 250
++++ILGDS VGKT L+ Q K S ++ +I +++ +IVD ++ +++
Sbjct: 19 IRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKLEL 72
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 98 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD 229
+++LG +GVGK++L+ +F +F ++Y T+ + I +D
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDED 173
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 298 YRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 450
YR V+VFDVT +F+ + +W D + P V++GNK D
Sbjct: 43 YRALSGAVIVFDVTDRKSFERVPTWLD----KVQEHCGHEIPVVLVGNKTD 89
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 217
K+ ++G VGK+SL QFV +F + Y TI F TK +
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNI 47
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 510 IPYFETSAKEAVNVELAFQTIAR 578
+ + ETSAK +NV+LAF IAR
Sbjct: 152 VAFMETSAKTGLNVDLAFMAIAR 174
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 193
+++ ++GDSGVGKTSL++ +++ + TIG
Sbjct: 7 VRIAVVGDSGVGKTSLVHLICHEESISSAAWTIG 40
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 253 GTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFL 387
G+A E +S+ FY G + +LV D+T +F +L W E L
Sbjct: 69 GSANHENSRSI---FYNGINGLILVHDLTNRKSFTNLRKWLAEVL 110
>SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKK 163
LLKV I+G+ GK++L+NQ V +K
Sbjct: 39 LLKVAIIGEPNSGKSTLINQLVGEK 63
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT 187
+K++I GD GKT + ++ K F+ QY T
Sbjct: 226 MKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24)
Length = 1329
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 279 LEPFLASSTHICIVTILSSTITSFVRK-SAPIVALYWLENFLLTN*FIRDV 130
L PF A+S +C+V +L+ I F K AP+ A++ + + N ++ +V
Sbjct: 319 LTPFKANSLAVCVVVVLTVAIYPFWGKIVAPVSAIWKRQASEINNMYVNEV 369
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 98 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD 229
V +LG +G GKT ++ +NK + NQ + + D K V D+
Sbjct: 2508 VFVLGPAGTGKTQVIRS-LNKTYMNQKRKPMMFDLNPKAVTADE 2550
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 510 IPYFETSAKEAVNVELAFQTIARNALAQETEAELY 614
+P+FETSA++ +NV F+ + + L + + E++
Sbjct: 40 LPFFETSAEKNINVTDCFEALVDSILEEIKQKEIF 74
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTM 244
+KV+ +GD VGKTS + F + A+I D +K + +D + T+
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTV 59
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 202
M+S +K++ +G G GKT+L+NQ + K S + I D+
Sbjct: 1105 MNSVPYYRMKLVTVGMGGRGKTTLLNQLLKSKASAPHNELIIRDW 1149
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 26.2 bits (55), Expect(2) = 2.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 185 TIGADFLTKEVIVDDRIVTMQIWV 256
TIGA + TK V V + VT+ IWV
Sbjct: 618 TIGAAYGTKTVTVRNTRVTLGIWV 641
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2
Query: 236 VTMQIWVLL 262
VTM+IWVLL
Sbjct: 659 VTMEIWVLL 667
>SB_42508| Best HMM Match : Peptidase_U57 (HMM E-Value=4.2)
Length = 703
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -2
Query: 300 IESYSKRLEPFLASSTHICIVTILSSTITSFVRKSAPIVALYWLENFLLTN*FIRDVFPT 121
+ +Y KR E LAS T + L T V + PI ++ L N L+++ I + T
Sbjct: 520 VRNYEKRYETSLASRTTDALADSLLMLTTKLVGMALPIDSVVDLHNDLVSDYIINNEGVT 579
Query: 120 PLSPRIITFSRSFFR 76
L ++ S S R
Sbjct: 580 ALHAKLPKGSASIDR 594
>SB_57720| Best HMM Match : DUF222 (HMM E-Value=3.3)
Length = 252
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 379 EFLIQASPRDPDNFPFVILGNKVDLDNR--AVSVKRGQQWCQSKNA-SRILRQVPKK 540
E L +D FP G + D R AVS K G QWC+++ A S + R P++
Sbjct: 155 EVLYSVGKKDSIKFPHSGPGGE-DSQGRDLAVSRKGGAQWCEARGAKSEVWRVAPQE 210
>SB_57304| Best HMM Match : SRP9 (HMM E-Value=0.7)
Length = 429
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 385 LIQASPRDPDNFPFVILGNKVDLDNRAVSVKRGQQWCQSKNASRI 519
+++ SP +FP ++ D +V VKR +C+ + A RI
Sbjct: 191 IVEVSPERMTDFPGTMIKGFSDGKMESVPVKRKHDYCEEERAKRI 235
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQ 175
+K+++LG+SG GKTS + V + NQ
Sbjct: 261 IKLVLLGESGAGKTSCAHGLVECEAINQ 288
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +2
Query: 83 KLLLKVIILGDSGVGKTSLMNQFVNKKFSN 172
K+ +KV++LG GKTSL+ ++++ +F++
Sbjct: 25 KVDVKVVLLGKEYSGKTSLVERYLHHRFND 54
>SB_6693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 301 DRKLLQAIGTVLGQQYPYLHRNDSIVNDYF 212
+ K+L A+ T + + +PY+ ND + N+ F
Sbjct: 191 ETKMLSALLTGINRAFPYVKENDEMYNEQF 220
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 98 VIILGDSGVGKTSLMNQFVNKK 163
+++ G G GKTSL+N F++K+
Sbjct: 364 ILLTGPRGCGKTSLINDFLDKQ 385
>SB_44764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +2
Query: 53 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE 214
K++C +SSR+ + + + D G+ + SL+N K ++ ++ + L +E
Sbjct: 205 KIVCSVSSRECCVEESFVGDDRGIDEASLLNALKEKGIVDEVMRSLRFEGLERE 258
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 83 KLLLKVIILGDSGVGKTSLMNQFVNKKF 166
K++ V + GDSGVGKT+L Q V K F
Sbjct: 117 KMIRAVNLFGDSGVGKTTLA-QEVAKSF 143
>SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/85 (23%), Positives = 43/85 (50%)
Frame = +1
Query: 283 LGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNR 462
+GV + RG+D C++V V +P E + +L +P D ++ G+ + N
Sbjct: 358 IGVQYRRGSDDCIVVNVVESPTG----EDIVEPYLRIGTPPDEEDED----GDTLSPQNE 409
Query: 463 AVSVKRGQQWCQSKNASRILRQVPK 537
V+++RG + + ++ S++ + K
Sbjct: 410 GVTLRRGTKTPRPRSMSQVPLPIAK 434
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT 187
LK+ I+GD VGKT+L F +Y T
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPT 38
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -2
Query: 300 IESYSKRLEPFLASSTHICIVTILSSTITSFVRKSAPIVALYWLENFLLTN*FIRD 133
+ Y KR E LAS T + + T V + PI ++ L N L+++ I +
Sbjct: 1604 VRKYEKRYETALASRTPVALADSFLKLTTKLVGMALPIDSVVDLHNDLVSDYIINN 1659
>SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -2
Query: 312 IRPTIESYSKRLEPFLASSTHICIVTILSSTITSFVRKSAPIVALYWLENFLLTN*FIRD 133
I + Y KR E LAS T + T V + PI ++ L N L+++ I +
Sbjct: 562 IAEEVRKYEKRYETALASRTTDALADSFLKLTTKLVGMALPIDSVVDLHNDLVSDYIINN 621
Query: 132 VFPT---PLSPR 106
T LSPR
Sbjct: 622 ELRTLCGSLSPR 633
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLM 142
L+K +++G+SGVGKT L+
Sbjct: 14 LIKCVVVGNSGVGKTRLI 31
>SB_9653| Best HMM Match : Retrotrans_gag (HMM E-Value=0.05)
Length = 626
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 3/25 (12%)
Frame = -1
Query: 340 QLRQKLIRSNPP---HDRKLLQAIG 275
+LR++L RSNPP +DRKL+ A G
Sbjct: 323 ELRKELRRSNPPNQNYDRKLIAAPG 347
>SB_50078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 300 IESYSKRLEPFLASSTHICIVTILSSTITSFVRKSAPIVALYWLENFLLTN*FIRD 133
+ Y KR E LAS T + T V + PI ++ L N L++N I +
Sbjct: 265 VRKYEKRYETALASRTTDALADSFLKLATKLVGMALPIDSVVDLHNDLVSNYIINN 320
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 315 AIRPTIESYSKRLEPFLA 262
+++PT SY K+ EPFLA
Sbjct: 2755 SVKPTAASYEKKSEPFLA 2772
>SB_13336| Best HMM Match : Pox_A32 (HMM E-Value=0.049)
Length = 960
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -2
Query: 300 IESYSKRLEPFLASSTHICIVTILSSTITSFVRKSAPIVALYWLENFLLTN*FIRDVFPT 121
+ Y KR E LAS T +V T V + PI ++ L N L+++ I + T
Sbjct: 668 VRKYEKRYETALASRTTDALVDSFLKLTTKLVGMALPIDSVVDLHNDLVSDYIINNELRT 727
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,297,980
Number of Sequences: 59808
Number of extensions: 426249
Number of successful extensions: 1378
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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