Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0516
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 150 7e-37
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 89 2e-18
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 66 2e-11
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 66 2e-11
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 65 3e-11
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 65 3e-11
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 64 8e-11
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 64 1e-10
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 62 3e-10
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 61 5e-10
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 61 5e-10
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 61 5e-10
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 61 5e-10
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 61 5e-10
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 61 5e-10
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 60 1e-09
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 60 2e-09
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 58 7e-09
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 58 7e-09
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 57 9e-09
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 57 9e-09
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 57 9e-09
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 57 1e-08
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 56 2e-08
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 56 2e-08
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 56 2e-08
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 56 2e-08
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 56 2e-08
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 54 6e-08
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 54 6e-08
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 54 8e-08
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 54 1e-07
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 54 1e-07
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 53 1e-07
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 53 1e-07
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 53 2e-07
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 52 4e-07
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 51 6e-07
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 51 6e-07
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 48 4e-06
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 48 4e-06
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 48 5e-06
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 48 5e-06
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 48 5e-06
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 48 5e-06
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 46 2e-05
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 46 2e-05
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 46 3e-05
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 45 5e-05
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 44 7e-05
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 43 2e-04
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 43 2e-04
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 42 3e-04
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 42 3e-04
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 42 3e-04
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 42 3e-04
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 42 3e-04
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 41 8e-04
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 41 8e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 40 0.002
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 39 0.003
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 39 0.003
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 38 0.004
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 38 0.004
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 36 0.031
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 36 0.031
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 36 0.031
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 35 0.041
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 35 0.041
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 35 0.054
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 34 0.095
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 33 0.13
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 33 0.17
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 32 0.29
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 32 0.29
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 31 0.51
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 30 1.5
Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 29 2.7
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 28 4.7
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 28 4.7
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 28 4.7
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 28 4.7
Z82272-8|CAB05223.1| 337|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z82260-13|CAB05143.1| 337|Caenorhabditis elegans Hypothetical p... 27 8.2
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 27 8.2
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 150 bits (364), Expect = 7e-37
Identities = 69/84 (82%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERFQSLGVAFYRGADCCVL FDVT +FKSL+SWRDEFLIQASPRDPD+FPFV+L
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLL 124
Query: 436 GNKVDLDN-RAVSVKRGQQWCQSK 504
GNKVDL++ RAVS KR Q WCQ+K
Sbjct: 125 GNKVDLESQRAVSSKRAQSWCQTK 148
Score = 108 bits (259), Expect = 4e-24
Identities = 49/60 (81%), Positives = 57/60 (95%)
Frame = +2
Query: 74 SRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+RKK LLKVIILGDSGVGKTSLMNQ+VN++FSNQYKATIGADFLT++V +DDR VT+QIW
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 63
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 441 QSRLG*SCRFCQTWSTMVPEQERIPYFETSAKEAVNVELAFQTIARNALAQETE 602
+S+ S + Q+W + IPY+E SAKEA+NVE AF IAR+ALA+E++
Sbjct: 131 ESQRAVSSKRAQSWCQT---KGNIPYYEVSAKEALNVEAAFLAIARDALARESQ 181
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 9/67 (13%)
Frame = +2
Query: 74 SRKKLLLKVIILGDSGVGKTSLMNQF---------VNKKFSNQYKATIGADFLTKEVIVD 226
+RKK LLKVIILGDSGVGKTSLMNQ+ VN++F NQYKATIGADFLT++V +D
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNID 63
Query: 227 DRIVTMQ 247
DR VT+Q
Sbjct: 64 DRTVTLQ 70
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 59 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR-I 235
+ +++ K+ KV+++GD GVGKTS++ +FV+ FS+ YK TIG DF K + VD+ +
Sbjct: 1 MAALTNNDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTV 60
Query: 236 VTMQIW 253
V +QIW
Sbjct: 61 VHLQIW 66
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 259 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILG 438
+GQ+R+ + +Y+ A ++V D T T + W+ + + + D P ++L
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLA 128
Query: 439 NKVDLDNR 462
NK D+DN+
Sbjct: 129 NKCDIDNK 136
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 59 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR-I 235
+ +++ K+ KV+++GD GVGKTS++ +FV+ FS+ YK TIG DF K + VD+ +
Sbjct: 1 MAALTNNDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTV 60
Query: 236 VTMQIW 253
V +QIW
Sbjct: 61 VHLQIW 66
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 259 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILG 438
+GQ+R+ + +Y+ A ++V D T T + W+ + + + D P ++L
Sbjct: 69 SGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLA 128
Query: 439 NKVDLDNR 462
NK D+DN+
Sbjct: 129 NKCDIDNK 136
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+SL AF+R A +L+FD+T +F ++ W + + A PD +I
Sbjct: 72 TAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPD---IIIC 128
Query: 436 GNKVDLDN-RAVSVKRGQQ 489
GNK DL+N R VS R +Q
Sbjct: 129 GNKADLENRRQVSTARAKQ 147
Score = 50.8 bits (116), Expect = 8e-07
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 220
L+K + LGDSGVGKTS ++++ + F+ Q+ +T+G DF K+V+
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVV 50
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+SL AF+R A +L+FD+T +F ++ W + + A PD +I
Sbjct: 72 TAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPD---IIIC 128
Query: 436 GNKVDLDN-RAVSVKRGQQ 489
GNK DL+N R VS R +Q
Sbjct: 129 GNKADLENRRQVSTARAKQ 147
Score = 50.8 bits (116), Expect = 8e-07
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 220
L+K + LGDSGVGKTS ++++ + F+ Q+ +T+G DF K+V+
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVV 50
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 64.1 bits (149), Expect = 8e-11
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K++ LG+ VGKTSL+ +F+ F N Y+ATIG DFL+K + ++DR V +Q+W
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 64
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+SL ++ R + V+V+D+T N+F W D+ + R D +++
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDV---RTERGSDVI-IMLV 121
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKN 507
GNK DL D R V+ G++ + N
Sbjct: 122 GNKTDLSDKRQVTTDEGERKAKELN 146
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K++ LG+ VGKTS++ +F+ F N Y+ATIG DFL+K + ++DR + +QIW
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K++ LG+ VGKTS++ +F+ F N Y+ATIG DFL+K + ++DR + +Q+W
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 65
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+SL ++ R + V+V+D+T N+F W D+ + R D V++
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDV---RNERGCDVI-IVLV 122
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKN 507
GNK DL D R VS + G++ + N
Sbjct: 123 GNKTDLADKRQVSTEDGEKKARDLN 147
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+++ LG+ VGKTSL+ +F+ F N Y+ATIG DFL+K + ++DR V +Q+W
Sbjct: 12 ELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMW 64
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA +L++D+T +F S++ W Q +N V++
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLV 133
Query: 436 GNKVDLDN-RAVSVKRGQQ 489
GNK D+D+ R VS+ RG+Q
Sbjct: 134 GNKCDMDSERVVSMDRGRQ 152
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIW
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTI 572
+Q + +FETSAKE +NV+ F+ +
Sbjct: 155 DQLGLEFFETSAKENINVKAVFEKL 179
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA +L++D+T +F S++ W Q +N V++
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLV 133
Query: 436 GNKVDLDN-RAVSVKRGQQ 489
GNK D+D+ R VS+ RG+Q
Sbjct: 134 GNKCDMDSERVVSMDRGRQ 152
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIW
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTI 572
+Q + +FETSAKE +NV+ F+ +
Sbjct: 155 DQLGLEFFETSAKENINVKAVFEKL 179
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA +L++D+T +F S++ W Q +N V++
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLV 133
Query: 436 GNKVDLDN-RAVSVKRGQQ 489
GNK D+D+ R VS+ RG+Q
Sbjct: 134 GNKCDMDSERVVSMDRGRQ 152
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIW
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTI 572
+Q + +FETSAKE +NV+ F+ +
Sbjct: 155 DQLGLEFFETSAKENINVKAVFEKL 179
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA +L++D+T +F S++ W Q +N V++
Sbjct: 92 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLV 147
Query: 436 GNKVDLDN-RAVSVKRGQQ 489
GNK D+D+ R VS+ RG+Q
Sbjct: 148 GNKCDMDSERVVSMDRGRQ 166
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIW
Sbjct: 36 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 90
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTI 572
+Q + +FETSAKE +NV+ F+ +
Sbjct: 169 DQLGLEFFETSAKENINVKAVFEKL 193
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 61.3 bits (142), Expect = 5e-10
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L KV+++GDSGVGK++L+++F +F+ + K+TIG +F T+ + V+ + V QIW
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIW 65
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA +LV+D+ T++++E W E A N +++
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD----QNIVIMLV 122
Query: 436 GNKVDLDN-RAVSVKRGQQWCQSKNASRI 519
GNK DL + RAV + + + S I
Sbjct: 123 GNKSDLRHLRAVPTDEAKIYAERNQLSFI 151
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA +L++D+T +F S++ W Q +N V++
Sbjct: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW----CTQIKTYSWENAQVVLV 133
Query: 436 GNKVDLDN-RAVSVKRGQQ 489
GNK D+D+ R VS+ RG+Q
Sbjct: 134 GNKCDMDSERVVSMDRGRQ 152
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V D+ V +QIW
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTI 572
+Q + +FETSAKE +NV+ F+ +
Sbjct: 155 DQLGLEFFETSAKENINVKAVFEKL 179
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L KV+++GDSGVGK++L+++F +F + K+TIG +F T+ + V+ + V QIW
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIW 65
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER++++ A+YRGA +LV+D+ T++++E W E A N + +
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD----QNIVIMPV 122
Query: 436 GNKVD 450
GNK D
Sbjct: 123 GNKCD 127
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQER+ SL +YRGA ++V+D+T +F+ ++W E QASP N +
Sbjct: 75 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASP----NIVMALA 130
Query: 436 GNKVDLDNR 462
GNK D+ N+
Sbjct: 131 GNKADVANK 139
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ V +DD + +IW
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIW 73
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/81 (35%), Positives = 50/81 (61%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF++L ++YRGA + V+DVT+ ++F+ L W E + DN +++
Sbjct: 67 TAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCT---NDNIIKMMV 123
Query: 436 GNKVDLDNRAVSVKRGQQWCQ 498
NK+D+ NR V+ + G ++ +
Sbjct: 124 ANKIDMPNRVVTREEGLKFAK 144
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
SS LK++I+G+SGVGK+SLM +FV+ F + ATIG DF + +D V + I
Sbjct: 5 SSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAI 64
Query: 251 W 253
W
Sbjct: 65 W 65
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQE+F L +Y C +++FDVTA T+K++ +W + R +N P V+
Sbjct: 65 TAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDL-----ARVCENIPIVLC 119
Query: 436 GNKVDLDNRAVSVK 477
GNKVD+ +R V K
Sbjct: 120 GNKVDVKDRKVKAK 133
Score = 35.9 bits (79), Expect = 0.024
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 199
K++++GD G GKT+ + + + +F +Y AT+G +
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 45
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K++I+GDSGVGK+SL+ +F + FS Y TIG DF + + ++ + V +QIW
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K++I+GDSGVGK+SL+ +F + FS Y TIG DF + + ++ + V +QIW
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Score = 50.8 bits (116), Expect = 8e-07
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ +YRG V+V+DVT +F +++ W +Q + D+ V++
Sbjct: 66 TAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRW-----LQEIENNCDSVQKVLV 120
Query: 436 GNKVDLDNRAVSVKR-GQQWCQSKNAS 513
GNK + + R V ++ + + QS N S
Sbjct: 121 GNKCEENERRVVLESDARNYAQSMNIS 147
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 57.2 bits (132), Expect = 9e-09
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF ++ ++YRGA +LV+D+T +F ++ W AS ++ +IL
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVVKMIL 120
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKNAS 513
GNK D+ D R VS +RG++ Q S
Sbjct: 121 GNKCDMSDRRVVSRERGEKIAQDHGIS 147
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/56 (37%), Positives = 38/56 (67%)
Frame = +2
Query: 86 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+L K++++GDSGVGKT ++ +F + F+ + +TIG DF K + + + + +QIW
Sbjct: 8 MLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIW 63
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K++++GD GVGKT ++ +F N F ++ TIG DF K ++VD + V +QIW
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIW 64
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K++++GD GVGKT ++ +F N F ++ TIG DF K ++VD + V +QIW
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIW 64
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
T GQERF+++ ++YR A+ VL +D+T +F SL+ W D+ A+P N +++
Sbjct: 66 TGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAP----NVVKLLI 121
Query: 436 GNKVDL-DNRAVSVKRGQ 486
G K DL D RA+ + +
Sbjct: 122 GTKCDLEDQRAIEAEEAE 139
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 247
M + L K++++G+ GVGK++L+++F +F+ + K TIG +F TK + V+ + V +Q
Sbjct: 1 MGNEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQ 60
Query: 248 IW 253
IW
Sbjct: 61 IW 62
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAG ERF+ ++YRGA +LV+D++ T++S+E W A+ ++ ++
Sbjct: 64 TAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHAN----EDIVITLV 119
Query: 436 GNKVDLDNRAVSVKRGQQWCQSKNASRI 519
GNK DL + AV + + + + S I
Sbjct: 120 GNKSDL-SHAVPTDEAKIYAERNHISFI 146
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQE F+S+ ++YRGA +LV+D+T +TF L SW ++ A N +++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLED----ARQHSNSNMVIMLI 117
Query: 436 GNKVDLDNRAVSVKR 480
GNK DL+ R VKR
Sbjct: 118 GNKSDLEARR-EVKR 131
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K II+GD+GVGK+ L+ QF +K+F + TIG +F + V +D + + +QIW
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIW 60
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 247
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + + +Q
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 248 IW 253
IW
Sbjct: 61 IW 62
Score = 48.0 bits (109), Expect = 5e-06
Identities = 18/39 (46%), Positives = 31/39 (79%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 372
TAGQERF+++ A+YRGA +LV+D+T +F+++++W
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW 102
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 247
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + + +Q
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 248 IW 253
IW
Sbjct: 61 IW 62
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ A+YRGA +LV+D+T +F+++++W + + +I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIEEHAASDVERMII 119
Query: 436 GNKVDL-DNRAVSVKRGQQ 489
GNK D+ + R VS RG+Q
Sbjct: 120 GNKCDIEERREVSRDRGEQ 138
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 247
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + + +Q
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 248 IW 253
IW
Sbjct: 61 IW 62
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ A+YRGA +LV+D+T +F+++++W + + +I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIEEHAASDVERMII 119
Query: 436 GNKVDL-DNRAVSVKRGQQ 489
GNK D+ + R VS RG+Q
Sbjct: 120 GNKCDIEERREVSRDRGEQ 138
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/65 (33%), Positives = 41/65 (63%)
Frame = +2
Query: 59 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIV 238
+ M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + + +D + +
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 239 TMQIW 253
+QIW
Sbjct: 61 KLQIW 65
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/65 (33%), Positives = 41/65 (63%)
Frame = +2
Query: 59 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIV 238
+ M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + + +D + +
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 239 TMQIW 253
+QIW
Sbjct: 61 KLQIW 65
Score = 54.4 bits (125), Expect = 6e-08
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ ++YRGA ++V+D+T TF +++ W E A +N +++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYAC----ENVNKLLV 122
Query: 436 GNKVDLD-NRAVSVKRGQQW 492
GNK DL RAV + Q +
Sbjct: 123 GNKCDLTAKRAVETQAAQDY 142
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 510 IPYFETSAKEAVNVELAFQTIA 575
IP+ ETSAK + NVE AF T+A
Sbjct: 148 IPFLETSAKSSTNVEQAFLTMA 169
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+ + + R AD ++V+DVT NTF+ +E W + + D + + ++
Sbjct: 112 TAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVY---LI 168
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKNA 510
GNK DL + R V+ G+ NA
Sbjct: 169 GNKTDLVEKREVTEAEGKAMAAKINA 194
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR----IV 238
S+ K KV++LGDSGVGKTS++ + ATIGA F++ +V D R +V
Sbjct: 46 STAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVV 105
Query: 239 TMQIW 253
+Q+W
Sbjct: 106 RLQVW 110
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 54.4 bits (125), Expect = 6e-08
Identities = 27/86 (31%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQE++ +LG +YRG++ +LVFD+T +F+ +++W +++ + +I+
Sbjct: 68 TAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNW----VLEIKTCLGNTAEILIV 123
Query: 436 GNKVDL-DNRAVSVKRGQQWCQSKNA 510
GNK+DL + R V+ + + + +S+ A
Sbjct: 124 GNKIDLEEERQVTRQDAEAYAESEGA 149
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +2
Query: 77 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+K K+++LG+ VGK+SL+ +FV KFS ++ +TI A F K V V+D + IW
Sbjct: 8 QKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIW 66
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 54.4 bits (125), Expect = 6e-08
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
++++ GD+ VGK+S + + + ++F+NQ +T+G DF K V VD R V +Q+W
Sbjct: 463 RIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLW 515
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+SL +++R AD +LV+DV A +F + W E + +++ R + P +++
Sbjct: 517 TAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDW-IETIKESTER---SIPIILV 572
Query: 436 GNKVDL 453
GNKVD+
Sbjct: 573 GNKVDM 578
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 54.0 bits (124), Expect = 8e-08
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K II+GD+GVGK+ L+ QF +K+F + TIG +F + V +D + + +Q+W
Sbjct: 6 LFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMW 60
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+++ ++YRGA ++V+D+T +T+ L SW L A N ++
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSW----LADAKSLTNPNTAIFLI 122
Query: 436 GNKVDLDNR 462
GNK DL+++
Sbjct: 123 GNKADLEDQ 131
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K II+GD GVGK+ L++QF KKF TIG +F T+ + V + + +QIW
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAG E+F ++ + + VLV+ +TA +TF L RD+ L +D D P +
Sbjct: 56 LDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQIL---RVKDTDEVPMI 112
Query: 430 ILGNKVDL-DNRAVSVKRGQ 486
++GNK DL D R V +GQ
Sbjct: 113 LVGNKCDLEDERVVGKDQGQ 132
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
K+++LG GVGK++L QFV F +Y TI D K+V VD + ++I
Sbjct: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEI 55
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +2
Query: 83 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
K L KV+++G++GVGKT L+ +F F ATIG DF+ K V V + + +QIW
Sbjct: 5 KYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 61
Score = 51.2 bits (117), Expect = 6e-07
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++YR A VLV+DV+ +F L W E A+ R +++
Sbjct: 63 TAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRR----VLKILV 118
Query: 436 GNKVDL-DNRAVSVKRGQQW 492
GNKVD D R V + G+ +
Sbjct: 119 GNKVDKGDEREVPERIGRDF 138
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIW 253
+ KV+ +GDS VGKT +++F + +F + ATIG DF K + I +R + MQ+W
Sbjct: 202 IFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLW 257
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++R AD VL+FDVT+ +F ++ +W D ++A D ++
Sbjct: 259 TAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDS--VRAGVDDAT--VMCLV 314
Query: 436 GNKVDL 453
GNK+DL
Sbjct: 315 GNKMDL 320
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K II+GD GVGK+ L++QF KKF TIG +F T+ + V + + +QIW
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +1
Query: 265 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 444
QE+F L +Y C +++FDVTA T+K++ +W + R +N P V+ GNK
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDL-----ARVCENIPIVLCGNK 56
Query: 445 VDLDNRAVSVK 477
VD+ +R V K
Sbjct: 57 VDVKDRKVKAK 67
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/56 (37%), Positives = 38/56 (67%)
Frame = +2
Query: 86 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+L K++++GDSGVGKT ++ +F + F+ + +TIG DF K + + + + +QIW
Sbjct: 8 MLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIW 63
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF ++ ++YRGA +LV+D+T +F ++ W AS ++ +IL
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVVKMIL 120
Query: 436 GNK 444
GNK
Sbjct: 121 GNK 123
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQE+F+S+ ++YR + + ++D T +F+ +E+W E + P F ++
Sbjct: 74 TAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLV 133
Query: 436 GNKVDLDN-RAVSVKRGQQWCQ 498
G K D+D+ R V+ + G+ + +
Sbjct: 134 GTKSDMDSQRQVNYEEGEYFAK 155
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIW 253
++I++GDS VGK+SL+ F K + T+G DF + + + V +Q+W
Sbjct: 19 RLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLW 72
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
T GQERF+SL ++YR A +LV+D+T+ +F LE W + DPD V++
Sbjct: 62 TCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDL---QRLGDPD-IVIVLI 117
Query: 436 GNKVDLD-NRAVSVKRGQQWCQ 498
GNK DL+ +R V + G+ + +
Sbjct: 118 GNKSDLEADREVRKEEGEAFAR 139
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/55 (32%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K +I+GD GVGK++L+ +F+ K F + + +T+G +F + + +D + V + +W
Sbjct: 6 VFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVW 60
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF++L ++YRGA + V+DVT+ ++F+ L W E + DN +++
Sbjct: 40 TAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCT---NDNIIKMMV 96
Query: 436 GNKVDL 453
NK+D+
Sbjct: 97 ANKIDM 102
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 140 MNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
M +FV+ F + ATIG DF + +D V + IW
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIW 38
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++YR AD +LV+D+ +F++ +W L Q + ++
Sbjct: 59 TAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW----LSQIKEYGKEAVQVTLV 114
Query: 436 GNKVDLDNRAVSVKRGQQWCQS 501
GNK DL RAV G++ ++
Sbjct: 115 GNKCDLP-RAVPTDEGKRLAEA 135
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 86 LLLKVIILGDSGVGKTSLMNQFVNKKF-SNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ LKV++LGDS GKT L+ ++ + F +N + +T+G D+ K + + D+ V +QIW
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIW 57
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTIARNAL 587
E +IP+ ETSAK NV+ AF +A L
Sbjct: 134 EAYQIPFMETSAKTGFNVDRAFLGLAERML 163
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+S+ ++YR AD +LV+D+ +F++ +W L Q + ++
Sbjct: 59 TAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW----LSQIKEYGKEAVQVTLV 114
Query: 436 GNKVDLDNRAVSVKRGQQWCQS 501
GNK DL RAV G++ ++
Sbjct: 115 GNKCDLP-RAVPTDEGKRLAEA 135
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 86 LLLKVIILGDSGVGKTSLMNQFVNKKF-SNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ LKV++LGDS GKT L+ ++ + F +N + +T+G D+ K + + D+ V +QIW
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIW 57
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 498 EQERIPYFETSAKEAVNVELAFQTIARNAL 587
E +IP+ ETSAK NV+ AF +A L
Sbjct: 134 EAYQIPFMETSAKTGFNVDRAFLGLAERML 163
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +2
Query: 77 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
++K KVII+G++ VGKT L +F +F +ATIG DF + ++++ ++ +Q+W
Sbjct: 96 KQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLW 154
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 432
TAGQER+ QS+ +YR + V V+DVT +F L W E D + P ++
Sbjct: 156 TAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSE-VPRIL 214
Query: 433 LGNKVDLD-NRAVSVKRGQQWCQSKN 507
+GNK D++ VS Q + N
Sbjct: 215 IGNKCDVECTNRVSTDEAQMFADRNN 240
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE + ++ + R + +LVF V +F+++ ++R++ +D D+ P V
Sbjct: 56 LDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI---RRVKDSDDVPMV 112
Query: 430 ILGNKVDLDNRAVSVK 477
++GNK DL +R+V +
Sbjct: 113 LVGNKCDLSSRSVDFR 128
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
K++++GD GVGK++L Q + F +Y TI D K+V++D + I
Sbjct: 5 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI-EDSYRKQVVIDGETCLLDI 55
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE + ++ + R + +LVF V +F+++ ++R++ +D D+ P V
Sbjct: 59 LDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI---RRVKDSDDVPMV 115
Query: 430 ILGNKVDLDNRAVSVK 477
++GNK DL +R+V +
Sbjct: 116 LVGNKCDLSSRSVDFR 131
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
K++++GD GVGK++L Q + F +Y TI D K+V++D + I
Sbjct: 8 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI-EDSYRKQVVIDGETCLLDI 58
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 430 ILGNKVDLDN 459
++GNK DL+N
Sbjct: 127 LVGNKADLEN 136
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 430 ILGNKVDLDN 459
++GNK DL+N
Sbjct: 127 LVGNKADLEN 136
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 430 ILGNKVDLDN 459
++GNK DL+N
Sbjct: 127 LVGNKADLEN 136
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+FP +
Sbjct: 70 LDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDFPII 126
Query: 430 ILGNKVDLDN 459
++GNK DL+N
Sbjct: 127 LVGNKADLEN 136
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD+ + ++I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVDEDLCKLEI 69
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 48.0 bits (109), Expect = 5e-06
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI-VTMQIW 253
++K++++GD GKTS+ +F + F Y T+G DF ++ + + + V +Q+W
Sbjct: 35 VIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVW 90
Score = 34.3 bits (75), Expect = 0.072
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 295 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN-FPFVILGNKVDL-DNRAV 468
+ GA+ LV+DVT +F++ W +++ + + + V++GNK DL + R V
Sbjct: 105 YLTGANIVFLVYDVTNSKSFENAVDWLS--VVKKNTKSSETPVKLVLMGNKTDLEERRVV 162
Query: 469 SVKRGQQWCQSKN 507
SV+ + + S +
Sbjct: 163 SVEAHKNFATSND 175
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
T GQE F+S+ A+YR A +LV+D+T +F LE W + P +++
Sbjct: 62 TCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHP----EMVIMLI 117
Query: 436 GNKVDLDN-RAVSVKRGQQWCQ 498
GNK DL R V+ + G+ + +
Sbjct: 118 GNKSDLKAVRDVTTEEGEAFAK 139
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/55 (32%), Positives = 36/55 (65%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+ K +I+GD GVGK++L+ +F ++ F + T+G +F K++ +D V +++W
Sbjct: 6 MFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVW 60
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD-RIVTMQIW 253
+KV+++G+SG GKT+L+ F++ F TIG DF K V ++D + + +Q+W
Sbjct: 7 VKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLW 61
Score = 40.7 bits (91), Expect = 8e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAGQERF+ L A+ R A +LV D++ N + L W+ +I + D + +I+
Sbjct: 63 TAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRWKG--IIDKNKSDFTS--TIIV 118
Query: 436 GNKVDL 453
GNK DL
Sbjct: 119 GNKHDL 124
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE F ++ + RG +LVF VT +F+ ++ L +D +P +
Sbjct: 70 LDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL---RVKDRSEYPVL 126
Query: 430 ILGNKVDLDN-RAVSVKRGQQ 489
++ NKVDL N R VS + G++
Sbjct: 127 LVANKVDLINQRVVSEQEGRE 147
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
K++++GD GVGK+SL QF K+F + Y TI ++ + +D V M +
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDV 69
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE F ++ + RG +LVF VT +F+ ++ L +D +P +
Sbjct: 70 LDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL---RVKDRSEYPVL 126
Query: 430 ILGNKVDLDN-RAVSVKRGQQ 489
++ NKVDL N R VS + G++
Sbjct: 127 LVANKVDLINQRVVSEQEGRE 147
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
K++++GD GVGK+SL QF K+F + Y TI ++ + +D V M +
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDV 69
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/46 (39%), Positives = 32/46 (69%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 226
L+K + GD GVGKTS ++++ + F+ Q+ +T+G DF K+V+ +
Sbjct: 7 LIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYE 52
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
KV++LG GVGK++L QFV+ F +Y TI DF KE+ VD + ++I
Sbjct: 5 KVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI-EDFYRKEIEVDGQPSVLEI 55
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAG E+F S+ + + V+V+ +T+ TF + + +++ + + +N P +
Sbjct: 56 LDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIV---RVKGSENVPIL 112
Query: 430 ILGNKVDLDN-RAVSVKRGQQWCQS 501
++GNK DL + R V + G +S
Sbjct: 113 LVGNKCDLSHQRQVRSEEGLALAES 137
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 435
TAG ER++++ ++Y A + V+D+T +F++LE + +L + P N +++
Sbjct: 62 TAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKY---WLKEIKQHAPPNAVLMLV 118
Query: 436 GNKVDLD-NRAVSVKRGQQ 489
GNK D+D R V R ++
Sbjct: 119 GNKADMDQERKVDFDRAEK 137
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +2
Query: 89 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
L K++++GD GK+ ++ +F F + +T+G DF K + + + +++W
Sbjct: 6 LFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELW 60
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR----IV 238
S+ K KV++LGDSGVGKTS++ + ATIGA F++ +V D R +V
Sbjct: 46 STAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVV 105
Query: 239 TMQIW 253
+Q+W
Sbjct: 106 RLQMW 110
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 429
+ TAGQE + ++ +YR + + VF + +F++ +R++ L + P V
Sbjct: 70 LDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQIL--RVKNSDSSVPIV 127
Query: 430 ILGNKVDL-DNRAVSV----KRGQQW 492
++GNK D+ D R VS +R +QW
Sbjct: 128 LVGNKGDMRDQRVVSAELCRQRAEQW 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +2
Query: 77 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
+++++ KVI++G GVGK++L QF+ +F +Y+ T AD K+V++D ++ I
Sbjct: 13 QQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPT-KADSYRKKVVLDGEECSIDI 69
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 TAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 432
TAGQER+ QS+ +YR + V V+DVT +F L W E D + P ++
Sbjct: 3 TAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSE-VPRIL 61
Query: 433 LGNK 444
+GNK
Sbjct: 62 IGNK 65
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2
Query: 83 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 223
K L KV+++ ++GVGKT L+ +F F ATIG DF+ K V V
Sbjct: 5 KYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 63 DYDRLRPLS 71
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 63 DYDRLRPLS 71
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 63 DYDRLRPLS 71
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 63 DYDRLRPLS 71
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 63 DYDRLRPLS 71
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLW 56
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIW 253
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLW 56
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + F +Y T+ D + V+VD R + + +W +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQE 62
Query: 272 GSNRL 286
+RL
Sbjct: 63 DYDRL 67
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 250 MGTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPF 426
+ TAG E+F + +YR A VLVF + +TF++L +++ D I+ P
Sbjct: 56 LDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGK-----EVPM 110
Query: 427 VILGNKVDL 453
+++GNK DL
Sbjct: 111 ILVGNKSDL 119
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
K+++LG+ GVGK++L Q+V F + Y ATI
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYDATI 36
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 420 PLRNIGKQSRLG*SCRFCQTWSTMVPEQERIPYFETSAKEAVNVELAFQTIA 575
P+ +G +S L + + ++ + E+ +IPYFETSA+ NV F+ A
Sbjct: 109 PMILVGNKSDLAETRQVDESEAHNFAEKLKIPYFETSARLNQNVSEVFEECA 160
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT ++ + F QY T+ D + ++ +D +V + +W +
Sbjct: 8 IKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV-FDNYSAQMSLDGNVVNLGLWDTAGQE 66
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 67 DYDRLRPLS 75
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT ++ + F QY T+ D + ++ +D +V + +W +
Sbjct: 8 IKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV-FDNYSAQMSLDGNVVNLGLWDTAGQE 66
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 67 DYDRLRPLS 75
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKNG 274
K++I+GD GKT L+ F +F + Y T+ +++ ++ VD + V + +W +
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65
Query: 275 SNRLE*LS 298
+RL LS
Sbjct: 66 YDRLRPLS 73
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVI 432
TAGQE + L Y D ++ F + +P++ +++ E W E + P N P ++
Sbjct: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VRHFCP----NVPIIL 114
Query: 433 LGNKVDLDNRAVSVK 477
+GNK DL + +V+
Sbjct: 115 VGNKRDLRSDPQTVR 129
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKNG 274
K++I+GD GKT L+ F +F + Y T+ +++ ++ VD + V + +W +
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65
Query: 275 SNRLE*LS 298
+RL LS
Sbjct: 66 YDRLRPLS 73
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVI 432
TAGQE + L Y D ++ F + +P++ +++ E W E + P N P ++
Sbjct: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VRHFCP----NVPIIL 114
Query: 433 LGNKVDLDNRAVSVK 477
+GNK DL + +V+
Sbjct: 115 VGNKRDLRSDPQTVR 129
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 35.5 bits (78), Expect = 0.031
Identities = 12/32 (37%), Positives = 26/32 (81%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
++++LG + VGKT+++ +++ +FS++YK TI
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI 50
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + KF ++Y T+ D V++ T+ ++ +
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 63 DYDRLRPLS 71
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVLLAKN 271
+K +++GD VGKT L+ + KF ++Y T+ D V++ T+ ++ +
Sbjct: 1 MKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 59
Query: 272 GSNRLE*LS 298
+RL LS
Sbjct: 60 DYDRLRPLS 68
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT--IGADFLTKEVIVDDRIVTMQIWVLLA 265
LK++I GD VGKT L + F +Y AT I + D +V + +W ++
Sbjct: 44 LKIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATDDVVKVDVWDIVD 103
Query: 266 KNGSNRLE 289
++ R++
Sbjct: 104 QSTKKRVK 111
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 289 VAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 453
V Y+G + + VFD+T ++W E++ + + P+ P ++L N+ D+
Sbjct: 140 VDVYKGTNGVIFVFDIT--------KTWTWEYVQKEIVKVPNKIPVLVLANRRDM 186
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 190
LK++++GD+ GKTSL+ + K+F + Y T+
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTV 37
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 238 YDANM-GTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 414
Y N+ TAGQ ++ + Y A+ ++ F + K+LES R ++ + D
Sbjct: 52 YAVNLFDTAGQGNYEQIRCLSYPHANVFLVCFSMIDR---KTLESCRSTWIPEIRKYAGD 108
Query: 415 NFPFVILGNKVDLDNRAVS 471
N P +++G K DL + A S
Sbjct: 109 NVPIMLVGTKNDLVDDADS 127
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.054
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 220
+K +++GD VGKT L+ + KF ++Y T+ ++ +I
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMI 46
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 33.9 bits (74), Expect = 0.095
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 77 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQI 250
R++ + V +LG VGK+++++QF+ KF Y+ T+ + I + R++ +QI
Sbjct: 18 RRQNKVTVAVLGAERVGKSAMVSQFLWHKFVEDYRPTVEEFNWIEYEIEEGRVLMVQI 75
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 101 IILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 202
+I+G+SGVGK+SLM +FV+ + +IG F
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.17
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +2
Query: 95 KVIILGDSGVGKTSLMNQFVNKKFSNQY 178
K+ ++GD+G GK+SL++Q + ++ N +
Sbjct: 239 KIYVVGDTGTGKSSLISQLITSEYKNAF 266
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 34/52 (65%)
Frame = +2
Query: 53 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLT 208
K+L K +R++ + +++ILG GKT+LM +F+++ ++ + T+G D T
Sbjct: 5 KILRKQRAREREM-RILILGLDNAGKTTLMKKFLDEP-TDTIEPTLGFDIKT 54
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/56 (21%), Positives = 34/56 (60%)
Frame = +2
Query: 92 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWVL 259
L V ++G +G GK+++ +++ K+F +Y +T+ ++ +E + ++ +W++
Sbjct: 10 LHVALVGMAGSGKSAIAVKYITKRFIGEYDSTLEDNYCRQETVGGQ---SLMVWMM 62
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 31.5 bits (68), Expect = 0.51
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = -3
Query: 566 LKS*LYIDSFFGTCLKIRDAFLLWHHC*PRLTETAR-LSKSTLFPNITKGKLSGSRGDAC 390
LK L DSFF LKI +A WH P + E ++ L + P IT+ +L C
Sbjct: 214 LKELLARDSFFALELKIFNAVRSWHQNNPTMKEASKVLLELVRLPLITQTELLN-----C 268
Query: 389 IRNSSLQLSKDLNVLGAVTSKTNTQQSAP 303
+R + L +S D +L A+ +T P
Sbjct: 269 VRPTGL-VSAD-TLLDAIEVQTQRPHEIP 295
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 104 ILGDSGVGKTSLMNQFVNKKFSN 172
ILG SG GKT+LMN ++ +N
Sbjct: 25 ILGSSGAGKTTLMNVLTSRNLTN 47
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 68 MSSRKKLLLKVIILGDSGVGKTSL 139
MSS + K+++LGDS VGKTSL
Sbjct: 1 MSSLDESSTKILVLGDSCVGKTSL 24
>Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical
protein W06G6.10 protein.
Length = 101
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 33 YFSSLCKNCCAKCLHG 80
+F+ LC NCCA C+ G
Sbjct: 82 FFAELCCNCCAGCVQG 97
>Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical
protein K09B11.2 protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 98 VIILGDSGVGKTSLMNQFVNKKFSNQYK 181
++ +G G GK++LM VN+ SN Y+
Sbjct: 186 ILPIGHKGAGKSNLMRSLVNRCLSNGYE 213
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = -2
Query: 243 IVTILSSTITSFVRKSAPIVALYWLENFLLTN*F--IRDVFPTP-LSPRIITFS-RSFFR 76
++ +L I+++ R ++ ++ L TN F I DV PTP ++ TF +SF+
Sbjct: 516 VLIVLREMISTY-RDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYL 574
Query: 75 EDILHN 58
EDILHN
Sbjct: 575 EDILHN 580
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 104 ILGDSGVGKTSLMNQFVNKKFSNQYKAT 187
I+G SG GKT+L+N + SN KAT
Sbjct: 97 IIGPSGAGKTTLLNVLTKRNLSN-LKAT 123
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 283 LGVAFYRGADCCVLVFDVTAPNTF 354
L A Y G +CC+ FD T NT+
Sbjct: 136 LDEAIYCGGNCCIWGFDKTGANTY 159
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 98 VIILGDSGVGKTSLM 142
++I GDSG+GKTSLM
Sbjct: 410 LLITGDSGIGKTSLM 424
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 98 VIILGDSGVGKTSLM 142
++I GDSG+GKTSLM
Sbjct: 438 LLITGDSGIGKTSLM 452
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 98 VIILGDSGVGKTSLM 142
++I GDSG+GKTSLM
Sbjct: 410 LLITGDSGIGKTSLM 424
>Z82272-8|CAB05223.1| 337|Caenorhabditis elegans Hypothetical
protein F55G11.1 protein.
Length = 337
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 29 IVFFIIV*KLLCKMSSRKKLLLKVIILGDS-------GVGKTSLMNQFVNKKFSNQYKAT 187
++FFII+ K L SSR + + +V+ +G + G S+++ F+ + QY
Sbjct: 116 LMFFIILEKFLWTCSSRTRQIFRVVTIGKNKYWLALIGCIGYSVLSAFIQSRSLLQYGEV 175
Query: 188 IGADFLTKEVIVD 226
D L + V D
Sbjct: 176 PFCDLLFRPVGAD 188
>Z82260-13|CAB05143.1| 337|Caenorhabditis elegans Hypothetical
protein F55G11.1 protein.
Length = 337
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 29 IVFFIIV*KLLCKMSSRKKLLLKVIILGDS-------GVGKTSLMNQFVNKKFSNQYKAT 187
++FFII+ K L SSR + + +V+ +G + G S+++ F+ + QY
Sbjct: 116 LMFFIILEKFLWTCSSRTRQIFRVVTIGKNKYWLALIGCIGYSVLSAFIQSRSLLQYGEV 175
Query: 188 IGADFLTKEVIVD 226
D L + V D
Sbjct: 176 PFCDLLFRPVGAD 188
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 104 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 223
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1409 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1448
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 104 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 223
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1396 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1435
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 104 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 223
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1394 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1433
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 104 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 223
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1409 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1448
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,173,969
Number of Sequences: 27780
Number of extensions: 327810
Number of successful extensions: 1145
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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