Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0515
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.17 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   4.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
 Frame = -1

Query: 174 FFTCA--IFRSSLIF----NHFFYFLLVFSIRVIFCILGFLWF 64
           +F CA  IF   L+F     HFF   ++F++ ++FC   F++F
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC-CAFIFF 189



 Score = 25.4 bits (53), Expect = 0.39
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 171 FTCAIFRSSLIFNHFFYFLLVFSIRVIF--CILGFLWFFVFFC 49
           F C +     I+ +F+Y  ++F++ ++   CI  F +  + FC
Sbjct: 228 FYCVLIILLCIY-YFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -1

Query: 606 FTVR*SDCFHPLFLMLLIKFAAITIFLRFSKFTVQFWFLL 487
           FTV    C +  +   +I       +  F  FTV   FLL
Sbjct: 92  FTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLL 131


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 226 YAKMIRDNSQIQTFLMKNLTTMIPMITSS 312
           Y   +  N ++ TF++KN   + P +  S
Sbjct: 41  YHSPLESNHKLVTFILKNPPNLNPAVQGS 69


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 326 TSRDPYEATKSQCQTSGSRKTSSNLF*TD 412
           T+  PY+A   QC  S SR   +N+  T+
Sbjct: 92  TTSVPYDALTGQCIYSISRDYLNNVLLTE 120


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 326 TSRDPYEATKSQCQTSGSRKTSSNLF*TD 412
           T+  PY+A   QC  S SR   +N+  T+
Sbjct: 92  TTSVPYDALTGQCIYSISRDYLNNVLLTE 120


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 326 TSRDPYEATKSQCQTSGSRKTSSNLF*TD 412
           T+  PY+A   QC  S SR   +N+  T+
Sbjct: 92  TTSVPYDALTGQCIYSISRDYLNNVLLTE 120


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 450 DSKLPPKIKKEDKAETKIE 506
           DS + P+I  EDK   KI+
Sbjct: 61  DSSVDPEIDIEDKPAQKID 79


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 165 CAIFRSSLIFNHFFYFLLVFSI 100
           C+I   ++IFN FF + ++  I
Sbjct: 199 CSIKELNMIFNEFFGWPIIMII 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,377
Number of Sequences: 336
Number of extensions: 1907
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)