Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0515
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    31   0.039
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   6.0  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   6.0  
AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.      23   6.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 30.7 bits (66), Expect = 0.039
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = -1

Query: 141  IFNHFFYFLL-VFSIRVIFCIL--GFLWFFVFFCQSSF-LLDFLI 19
            I N+F YF   VF+I ++  ++  GFL+    FC+S+F LLD L+
Sbjct: 888  ILNYFDYFFTSVFTIELLLKLVSYGFLFHDGAFCRSAFNLLDLLV 932


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 314 GN*DTSRDPYEATKSQCQTSGSRKTSSNL 400
           G  + + DP+     QCQ S S +T  +L
Sbjct: 20  GGQEATEDPFADETDQCQISVSAETMKSL 48


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -1

Query: 450 LYVVFPFSWAAWVSVQKRFELVLRLPLV*HWLFV 349
           L V+F F W     + +   L +   +  HW+F+
Sbjct: 349 LGVIFQFLWRLGTVISRVISLTVYASVYSHWVFL 382


>AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 314 GN*DTSRDPYEATKSQCQTSGSRKTSSNL 400
           G  + + DP+     QCQ S S +T  +L
Sbjct: 20  GGQEATEDPFPDETDQCQISVSAETMKSL 48


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = -1

Query: 573 LFLMLLIKFAAITIFLRFSKFTVQFW--FLLYLPS*F*GAI--LSLYVVFPFSWAAWVSV 406
           L + +++  AAITI++ F+    +    F    P  F   I   +LY+ +P SW+ + S 
Sbjct: 153 LVVFVILLLAAITIYVLFNVSLAELEPNFTPSHPVSFSEGIGNRTLYMSWPSSWSVFSSA 212

Query: 405 QKR 397
            +R
Sbjct: 213 SQR 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,675
Number of Sequences: 2352
Number of extensions: 7412
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)