Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0515
         (624 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g18410.2 68418.m02167 expressed protein similar to p53 induci...    30   1.4  
At5g18410.1 68418.m02166 expressed protein similar to p53 induci...    30   1.4  
At2g22795.1 68415.m02704 expressed protein                             30   1.4  
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)...    29   1.9  
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70...    29   2.5  

>At5g18410.2 68418.m02167 expressed protein similar to p53 inducible
           protein [Homo sapiens] GI:5616320
          Length = 1017

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 81  LGFLWFFVFFCQSSFLLDFLIDQSL 7
           LGFLWF  F+ +SS ++ F I+ SL
Sbjct: 617 LGFLWFREFYLESSRVIQFPIECSL 641


>At5g18410.1 68418.m02166 expressed protein similar to p53 inducible
           protein [Homo sapiens] GI:5616320
          Length = 1234

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 81  LGFLWFFVFFCQSSFLLDFLIDQSL 7
           LGFLWF  F+ +SS ++ F I+ SL
Sbjct: 617 LGFLWFREFYLESSRVIQFPIECSL 641


>At2g22795.1 68415.m02704 expressed protein
          Length = 734

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 20/87 (22%), Positives = 37/87 (42%)
 Frame = +1

Query: 1   RHETLINKKIQEKRALTKENKEPKEAKDTKNNSNAXXXXXXXXXXXXXTGSKNGTSEKRE 180
           + E+   +K +EK   TK+N+E    ++TK+  N                ++  T EK E
Sbjct: 511 KEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEE 570

Query: 181 DGPVRRSARPSKIRDYAKMIRDNSQIQ 261
                 S   +K ++  K+ ++ S  Q
Sbjct: 571 SS----SQEETKEKENEKIEKEESAPQ 593


>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
           identical to heat shock protein 70 [Arabidopsis
           thaliana] GI:6746592
          Length = 718

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 16  INKKIQEKRALTKENKEPKEAKDTKNNSNA 105
           ++  +QE     KE+KE ++A DTKN +++
Sbjct: 583 VDTMVQEAERFAKEDKEKRDAIDTKNQADS 612


>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
           putative strong similarity to heat shock protein 70
           [Arabidopsis thaliana] GI:6746592; similar to heat shock
           70 protein - Spinacia oleracea,PID:g2654208
          Length = 718

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 16  INKKIQEKRALTKENKEPKEAKDTKNNSNA 105
           +++ +QE     K++KE ++A DTKN +++
Sbjct: 583 VDQMVQEAERFAKDDKEKRDAIDTKNQADS 612


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,332,774
Number of Sequences: 28952
Number of extensions: 160962
Number of successful extensions: 582
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)