Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0513
         (611 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2HAS7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_P92949 Cluster: FRO2 protein; n=26; Viridiplantae|Rep: ...    33   7.1  
UniRef50_Q9JJS7 Cluster: P2Y purinoceptor 4; n=6; Euteleostomi|R...    33   7.1  
UniRef50_A5ATI3 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_A2HAS7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 185

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 249 DEVSGPLVYRFFIXYCSFKTNRHKXILGMYLTRTIRHC 362
           DE+   +VY F + Y + K N    I  +Y++R +RHC
Sbjct: 120 DEIYNLIVYSFCLGYTTSKENGKTAIQLVYISRVLRHC 157


>UniRef50_P92949 Cluster: FRO2 protein; n=26; Viridiplantae|Rep:
           FRO2 protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 725

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 469 IRRSEVSVYFYTPRFLYIILXFYYFEHMGAGINFDYVYAFQAFAI 603
           IRR    V+FYT  +LYI+   ++  H+G   +F  +  F  F +
Sbjct: 281 IRRRFFEVFFYT-HYLYIVFMLFFVLHVGISFSFIALPGFYIFLV 324


>UniRef50_Q9JJS7 Cluster: P2Y purinoceptor 4; n=6; Euteleostomi|Rep:
           P2Y purinoceptor 4 - Mus musculus (Mouse)
          Length = 361

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 468 KDLAGRNDCLNAILYAFTG*LYLNTQNMILRG 373
           + LA  N CL+ +LY FTG  Y N    + RG
Sbjct: 288 RPLASANSCLDPVLYLFTGDKYRNQLQQLCRG 319


>UniRef50_A5ATI3 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 792

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 469 IRRSEVSVYFYTPRFLYIILXFYYFEHMGAGINFDYVYAFQAFAI 603
           IRR +  ++FYT  +LYII   ++  H+G    F  + +F  F +
Sbjct: 275 IRRKKFELFFYT-HYLYIIFMLFFILHVGITYAFISLPSFYLFLV 318


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,708,283
Number of Sequences: 1657284
Number of extensions: 10717361
Number of successful extensions: 17415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17400
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)