Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0513
         (611 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       30   7.4  
BC008641-1|AAH08641.1|  164|Homo sapiens CEP290 protein protein.       30   7.4  
AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen...    30   7.4  
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.             30   7.4  

>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 597  ESLESVHIVKIYSCTHVLEIIEXQNYIQKSWCIKIYRHFRSSYKDLAGRN 448
            +S+ +  IV I     +LE+ E     +   C K+Y H R+S K +  RN
Sbjct: 1045 KSITNSDIVSISKKITMLEMKELNERQRAEHCQKMYEHLRTSLKQMEERN 1094


>BC008641-1|AAH08641.1|  164|Homo sapiens CEP290 protein protein.
          Length = 164

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 597 ESLESVHIVKIYSCTHVLEIIEXQNYIQKSWCIKIYRHFRSSYKDLAGRN 448
           +S+ +  IV I     +LE+ E     +   C K+Y H R+S K +  RN
Sbjct: 105 KSITNSDIVSISKKITMLEMKELNERQRAEHCQKMYEHLRTSLKQMEERN 154


>AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen
           T21 protein.
          Length = 534

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 597 ESLESVHIVKIYSCTHVLEIIEXQNYIQKSWCIKIYRHFRSSYKDLAGRN 448
           +S+ +  IV I     +LE+ E     +   C K+Y H R+S K +  RN
Sbjct: 475 KSITNSDIVSISKKITMLEMKELNERQRAEHCQKMYEHLRTSLKQMEERN 524


>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
          Length = 1540

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 597 ESLESVHIVKIYSCTHVLEIIEXQNYIQKSWCIKIYRHFRSSYKDLAGRN 448
           +S+ +  IV I     +LE+ E     +   C K+Y H R+S K +  RN
Sbjct: 106 KSITNSDIVSISKKITMLEMKELNERQRAEHCQKMYEHLRTSLKQMEERN 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,601,808
Number of Sequences: 237096
Number of extensions: 1543664
Number of successful extensions: 2342
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2342
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)