Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0512
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 156 4e-37
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 138 1e-31
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 124 1e-27
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 119 4e-26
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 116 3e-25
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 111 2e-23
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 111 2e-23
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 108 8e-23
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 105 8e-22
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 104 2e-21
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 95 8e-19
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 91 2e-17
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 91 2e-17
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 87 2e-16
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 87 3e-16
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 85 9e-16
UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S riboso... 83 6e-15
UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;... 83 6e-15
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 81 1e-14
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 81 1e-14
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 77 2e-13
UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast ... 73 4e-12
UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, wh... 71 2e-11
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 71 3e-11
UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000... 69 8e-11
UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27; Archa... 67 3e-10
UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1; Guilla... 66 8e-10
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 65 1e-09
UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2; Methan... 60 5e-08
UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5; T... 56 8e-07
UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 54 3e-06
UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 51 2e-05
UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2; Methan... 50 3e-05
UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000... 50 4e-05
UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1; Methan... 49 9e-05
UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4; Haloba... 48 2e-04
UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58; Proteo... 47 3e-04
UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12; Proteo... 47 4e-04
UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7; Bacilli... 47 4e-04
UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11; Bacter... 47 4e-04
UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivi... 46 5e-04
UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23; ... 46 5e-04
UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23; ... 46 5e-04
UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1; Lentisp... 46 9e-04
UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59; Gammap... 46 9e-04
UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8; Gammapr... 46 9e-04
UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal prote... 45 0.001
UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10; Bacter... 45 0.001
UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candida... 45 0.002
UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2; environ... 44 0.003
UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4; Methan... 43 0.005
UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1; Psychro... 43 0.006
UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7; Bacteri... 42 0.008
UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1; Bactero... 42 0.011
UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7; Bactero... 42 0.011
UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23; ... 42 0.011
UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2; Methano... 42 0.014
UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36; Bacter... 42 0.014
UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2; Thermo... 42 0.014
UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23; Firmic... 41 0.025
UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila melanogaster|... 41 0.025
UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 41 0.025
UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 40 0.044
UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borreli... 40 0.044
UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2; ... 40 0.058
UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26; Firmic... 39 0.077
UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11; Bacter... 39 0.077
UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2; Wolbach... 39 0.077
UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14; Bacter... 39 0.077
UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candida... 38 0.13
UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candida... 38 0.18
UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellul... 38 0.18
UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16; Actino... 38 0.23
UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1; Maripro... 38 0.23
UniRef50_Q6BQ62 Cluster: Debaryomyces hansenii chromosome E of s... 38 0.23
UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candida... 37 0.31
UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orienti... 37 0.41
UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candida... 36 0.54
UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8; Francis... 36 0.95
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 35 1.3
UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23; ... 35 1.3
UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 34 2.2
UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of str... 34 2.9
UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 34 2.9
UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces cere... 33 5.0
UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellul... 33 5.0
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 33 6.7
UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23; ... 33 6.7
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 156 bits (378), Expect = 4e-37
Identities = 74/104 (71%), Positives = 87/104 (83%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + + PPR+PKYPRKS+P RNRMDA NIIKFPLT+EAAMKKIEDNNTLVFIVHT AN
Sbjct: 137 FHRPKTFRPPRNPKYPRKSVPNRNRMDAVNIIKFPLTTEAAMKKIEDNNTLVFIVHTRAN 196
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
+HIK++VKKLYD++V KVNTLIRPDGKKKA YD+L++
Sbjct: 197 KYHIKSSVKKLYDVDVLKVNTLIRPDGKKKAYVRLTRDYDALDV 240
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 149 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
PV KALKAQ+K++KG G RVRKIR SVHF RPK
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPK 141
Score = 40.3 bits (90), Expect = 0.033
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRL RDYDALDVANKIGII
Sbjct: 225 KKAYVRLTRDYDALDVANKIGII 247
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 138 bits (333), Expect = 1e-31
Identities = 67/94 (71%), Positives = 77/94 (81%), Gaps = 6/94 (6%)
Frame = +1
Query: 265 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKK 444
R PKYPRKS P+RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN H IK AVKK
Sbjct: 56 RQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKK 115
Query: 445 LYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
LYDI+VAKVNTLIRPDG+KKA YD+L++
Sbjct: 116 LYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDV 149
Score = 39.9 bits (89), Expect = 0.044
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 158 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
KALKA++ V+KG H + +KIR S FRRPK
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPK 50
Score = 39.1 bits (87), Expect = 0.077
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRLA DYDALDVANKIGII
Sbjct: 134 KKAYVRLAPDYDALDVANKIGII 156
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 124 bits (300), Expect = 1e-27
Identities = 62/89 (69%), Positives = 72/89 (80%), Gaps = 6/89 (6%)
Frame = +1
Query: 280 PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDIN 459
PRKS +RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV AN H IK AVKKLYDI+
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKHAVKKLYDID 60
Query: 460 VAKVNTLIRPDGKKKA------SYDSLEI 528
VAKVNTLIRPDG+KKA YD+L++
Sbjct: 61 VAKVNTLIRPDGEKKAYVRLAPDYDALDV 89
Score = 39.1 bits (87), Expect = 0.077
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRLA DYDALDVANKIGII
Sbjct: 74 KKAYVRLAPDYDALDVANKIGII 96
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 119 bits (287), Expect = 4e-26
Identities = 59/104 (56%), Positives = 76/104 (73%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + + ++ R PKYP KS P+RN++D Y IIKFPLT+E+AMKK DNNT VF+V AN
Sbjct: 46 FRRPKTLQLRRQPKYPWKSTPRRNKLDHYAIIKFPLTTESAMKKTGDNNTRVFMVDVKAN 105
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
H IK AVK+LYDI++ KVNTLI PDG+KKA YD+L++
Sbjct: 106 KHQIKQAVKRLYDIDMIKVNTLIWPDGEKKAYVPLAPDYDALDV 149
Score = 37.9 bits (84), Expect = 0.18
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 158 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
KALKA++ V+KG H + +KI S FRRPK
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPK 50
Score = 36.3 bits (80), Expect = 0.54
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ V LA DYDALDVANKIGII
Sbjct: 134 KKAYVPLAPDYDALDVANKIGII 156
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 116 bits (280), Expect = 3e-25
Identities = 59/104 (56%), Positives = 74/104 (71%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + + + R+PKYPR S RN++D Y I+K+PLT+E+AMKKIEDNNTLVFIV A+
Sbjct: 45 FHRPKTFKKERNPKYPRISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRAD 104
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
IK AVKK+YDI KVNTLIRPDG KKA YD+L++
Sbjct: 105 KKKIKDAVKKMYDIQSKKVNTLIRPDGTKKAYVRLTPDYDALDV 148
Score = 37.5 bits (83), Expect = 0.23
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRL DYDALDVANKIGII
Sbjct: 133 KKAYVRLTPDYDALDVANKIGII 155
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 111 bits (266), Expect = 2e-23
Identities = 55/74 (74%), Positives = 61/74 (82%)
Frame = +1
Query: 265 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKK 444
R PK PRKS P+RN++D Y IIKFPLT+E+AMKKIED NTLVFIV AN H IK AVKK
Sbjct: 10 RQPKCPRKSAPRRNKLDHYAIIKFPLTTESAMKKIED-NTLVFIVDVKANKHQIKQAVKK 68
Query: 445 LYDINVAKVNTLIR 486
LYDI+VAKVN LIR
Sbjct: 69 LYDIDVAKVNALIR 82
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 111 bits (266), Expect = 2e-23
Identities = 54/104 (51%), Positives = 74/104 (71%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + + + R P+YP KS P+RN++ Y +IKFPLT+E+A+K+ E+NNTL+F V AN
Sbjct: 46 FQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKFPLTTESAVKRTEENNTLLFTVDVKAN 105
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
H IK AVKKLYD +VA+V TLI PDG+KKA YD+L++
Sbjct: 106 KHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVRLAPDYDALDV 149
Score = 39.1 bits (87), Expect = 0.077
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRLA DYDALDVANKIGII
Sbjct: 134 KKACVRLAPDYDALDVANKIGII 156
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 158 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
KALKA++ +KG H +K R S+ F+RPK
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPK 50
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 108 bits (260), Expect = 8e-23
Identities = 51/81 (62%), Positives = 60/81 (74%)
Frame = +1
Query: 265 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKK 444
R PKYPRKS+P R+D + II PL +E A+KKIE+ NTLVFIV AN IK A+KK
Sbjct: 55 RAPKYPRKSVPHEPRLDEHKIIVHPLNTEGALKKIEEQNTLVFIVDVKANKAQIKQALKK 114
Query: 445 LYDINVAKVNTLIRPDGKKKA 507
LYDI+ K+NTLIRPDG KKA
Sbjct: 115 LYDIDTVKINTLIRPDGSKKA 135
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 105 bits (252), Expect = 8e-22
Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 6/94 (6%)
Frame = +1
Query: 265 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKK 444
R PKY K++P NR+D+Y +I+ P+TSE AMKK+ED N LVF V AN + IK AVK+
Sbjct: 42 RAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKE 101
Query: 445 LYDINVAKVNTLIRPDGKKK------ASYDSLEI 528
LY+++V KVNTL+RP+G KK A YD+L+I
Sbjct: 102 LYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDI 135
Score = 37.9 bits (84), Expect = 0.18
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 149 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
P KA A++ VVKG +GK+ K+R S FR PK
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPK 36
Score = 34.3 bits (75), Expect = 2.2
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRL DYDALD+AN+IG I
Sbjct: 120 KKAYVRLTADYDALDIANRIGYI 142
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 104 bits (249), Expect = 2e-21
Identities = 52/91 (57%), Positives = 66/91 (72%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + + PPR PK R +PKRN++DA+ II+ P+T+EAAMKKIEDN+TLVF+V AN
Sbjct: 94 FRRPKTYRPPRCPKDRRFEIPKRNKLDAFRIIRHPVTTEAAMKKIEDNDTLVFVVDRRAN 153
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
IKAAV+++Y I VAKVNTL P KKA
Sbjct: 154 KPAIKAAVQEMYKIKVAKVNTLNCPKNIKKA 184
Score = 35.9 bits (79), Expect = 0.72
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 152 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
V +ALKAQ+ + G H K +K+ ++ FRRPK
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPK 98
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ V+L D+DALDVANKIGII
Sbjct: 182 KKAYVKLPPDFDALDVANKIGII 204
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 95.5 bits (227), Expect = 8e-19
Identities = 46/81 (56%), Positives = 60/81 (74%), Gaps = 6/81 (7%)
Frame = +1
Query: 301 RNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL 480
+N+ DA+ II++PLT++ AMKKIE+NNTL FIV + AN IK A++KLY + KVNTL
Sbjct: 76 KNKWDAFRIIRYPLTTDKAMKKIEENNTLTFIVDSRANKTEIKKAIRKLYQVKTVKVNTL 135
Query: 481 IRPDGKKK------ASYDSLE 525
IRPDG KK ASYD+L+
Sbjct: 136 IRPDGLKKAYIRLSASYDALD 156
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +1
Query: 265 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKK 444
R PKYPRKS P+RN+ D I+KF LT+++AMK IEDNNT VFIV AN H I+ A +
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLTTKSAMKNIEDNNTFVFIVDAKANKHQIEQAGET 107
Query: 445 LYDINVAKVNTL 480
LYDI+ A V TL
Sbjct: 108 LYDIDTANVTTL 119
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +1
Query: 262 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVK 441
P+ P YPR+S+ K +MD + I+K PLT+E+A +KIE +NT+ F+V AN + AV
Sbjct: 68 PKKPAYPRRSVNKITKMDQFRILKAPLTTESATQKIEGSNTITFMVDMFANKSQVADAVA 127
Query: 442 KLYDINVAKVNTLIRPDGKKKA 507
K+YD+ V +VNTLI P G+KKA
Sbjct: 128 KMYDVKVKRVNTLITPRGEKKA 149
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 87.4 bits (207), Expect = 2e-16
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + + ++ R+PKY RKS+ + +D Y+IIK P+T+E+AMK +E NT+VF+V+ AN
Sbjct: 46 FYRPKTLKLQRNPKYERKSIKTQKSLDCYDIIKRPITTESAMKMVETLNTIVFLVNERAN 105
Query: 415 XHHIKAAVKKLYDINVAKVNTL-IRPDGKK 501
IK AV KLYD+ VA VNT+ DGKK
Sbjct: 106 KTQIKYAVNKLYDVKVANVNTVNTFGDGKK 135
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 RHPKYPRK-SLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVK 441
R PKY +K ++D ++I+++PLT+E+AMK IE+ NTLVF+V AN + AV
Sbjct: 51 RTPKYEKKVKTAYTKKLDKFSIVRYPLTTESAMKMIEELNTLVFVVDPRANKAKVAKAVS 110
Query: 442 KLYDINVAKVNTLIRPDGKKKA 507
+LYDI VNTLIRPDG+KKA
Sbjct: 111 QLYDITPVHVNTLIRPDGQKKA 132
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRL+ D DALDVANKIGII
Sbjct: 130 KKAFVRLSPDQDALDVANKIGII 152
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 85.4 bits (202), Expect = 9e-16
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 PRHPKYPRKSLPKRNR-MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAV 438
P+ PK R + ++ +D ++IIK+PLT+E +MK IE+ NTLVFIV + AN I AV
Sbjct: 52 PKSPKVKRHLITAHSKKLDKFSIIKYPLTTEKSMKMIEEINTLVFIVDSRANKEKIAKAV 111
Query: 439 KKLYDINVAKVNTLIRPDGKKKA 507
+LYD+ +VNTL RPDG KKA
Sbjct: 112 SELYDVKCVRVNTLNRPDGLKKA 134
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRL+ D DALDVANKIGII
Sbjct: 132 KKAYVRLSPDQDALDVANKIGII 154
>UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L23a - Homo sapiens
Length = 87
Score = 82.6 bits (195), Expect = 6e-15
Identities = 42/69 (60%), Positives = 46/69 (66%)
Frame = +1
Query: 358 MKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKASYDSLEIMTH 537
MKKIEDNNTLVF V A H IK AVKKLYD +VAKV+ LIRPD ++ L I
Sbjct: 1 MKKIEDNNTLVFTVDVKATKHQIKQAVKKLYDTDVAKVHALIRPDAGRRHKLHWLLITML 60
Query: 538 WTLPTKLAS 564
W LPTKL S
Sbjct: 61 WILPTKLGS 69
>UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;
n=2; Ostreococcus|Rep: RL23A_FRIAG 60S ribosomal protein
L23A - Ostreococcus tauri
Length = 259
Score = 82.6 bits (195), Expect = 6e-15
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +1
Query: 283 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINV 462
R++L N I+K PL +E A+ K E+NNTLVFIV AN IK AVK++YDI+
Sbjct: 167 RRTLSSLNHSS--QILKHPLANETALAKTENNNTLVFIVDARANKRQIKEAVKRMYDIDC 224
Query: 463 AKVNTLIRPDGKKKA 507
AKVNTLIRP+G KKA
Sbjct: 225 AKVNTLIRPNGDKKA 239
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ RL D+DALDVAN+IGII
Sbjct: 237 KKAYCRLTADHDALDVANRIGII 259
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 81.4 bits (192), Expect = 1e-14
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTS 408
F + + + ++PK P+ KS + +D Y IIK+PLTSE AMKKIE+ NTLVFI
Sbjct: 36 FKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLTSEKAMKKIEEINTLVFICDKR 94
Query: 409 ANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
A+ IK +VK L+DI AKVN L R +G KKA
Sbjct: 95 ADKRKIKKSVKSLFDIKCAKVNVLNRLNGDKKA 127
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/23 (60%), Positives = 22/23 (95%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRL++D+DAL+VANKIGI+
Sbjct: 125 KKAYVRLSKDHDALEVANKIGIL 147
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 81.4 bits (192), Expect = 1e-14
Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Frame = +1
Query: 169 GSEEGCKR*TWEESTENSQLCA---FPQTQDVEPPRHPKYPR--KSLPKRNRMDAYNIIK 333
G + K+ EES + ++ F + + ++ P++PK P+ KS K+ +D Y I+K
Sbjct: 59 GKNQQVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILK 117
Query: 334 FPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
+PLTSE AMKKIE+ NTLVFI A+ I +VK L+ I+ KVN L R +G KKA
Sbjct: 118 YPLTSEKAMKKIEEINTLVFICDKRADKKKITKSVKNLFGISCEKVNVLNRLNGDKKA 175
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/23 (60%), Positives = 22/23 (95%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRL++D+DAL+VANKIGI+
Sbjct: 173 KKAYVRLSKDHDALEVANKIGIL 195
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 77.4 bits (182), Expect = 2e-13
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAM 360
F + + EPPR+PKYPRKSLPKRNRMDAYNIIK+PLTSEAAM
Sbjct: 180 FRRPKTFEPPRNPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 221
Score = 69.3 bits (162), Expect = 6e-11
Identities = 35/56 (62%), Positives = 37/56 (66%)
Frame = +2
Query: 83 SKLKIAXXXXXXXXXXXXXXXXPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
+KLKIA PV KALK Q+KVVKGEHGKRVRKIR SVHFRRPK
Sbjct: 129 AKLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPK 184
>UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast
precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal
protein L23, chloroplast precursor - Spinacia oleracea
(Spinach)
Length = 198
Score = 73.3 bits (172), Expect = 4e-12
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +1
Query: 238 PQTQDV--EPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSA 411
P T++ P+ K +K R +D Y I++ P+ +EAA+K I D N+L+F V A
Sbjct: 83 PTTEEAATSQPKTSKKAKKLKYPRRILDVYQILQSPIITEAAIKNIADENSLLFTVDVRA 142
Query: 412 NXHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
+ I+ A+ + + V KVNTLIRPDG KKA
Sbjct: 143 DKKMIREAISNFFGVKVRKVNTLIRPDGTKKA 174
>UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=7; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_85, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 150
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/82 (43%), Positives = 48/82 (58%)
Frame = +1
Query: 262 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVK 441
PR + R+ P +D N++K PL +E MKK+ED NT+VF V+ A IK A
Sbjct: 49 PRFTRLTRQLKPITKGLDFQNVLKHPLITEKDMKKMEDENTMVFYVNQKATKPQIKRAFS 108
Query: 442 KLYDINVAKVNTLIRPDGKKKA 507
K+Y++ V KVN L GKKKA
Sbjct: 109 KIYEVKVRKVNILNTFGGKKKA 130
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMK 363
F + + PPR+PKYPRKS+P R+RMDAYNIIK+PLT+EAAMK
Sbjct: 170 FHRPKTFRPPRNPKYPRKSVPTRSRMDAYNIIKYPLTTEAAMK 212
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +2
Query: 149 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
PV KAL Q+KV+KG G R RKIRNSVHF RPK
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPK 174
>UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2001000 - Monodelphis domestica
Length = 144
Score = 68.9 bits (161), Expect = 8e-11
Identities = 38/65 (58%), Positives = 45/65 (69%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
+D Y IIKFPL +E+AMKKIED++ LVF N K VKKLYDI VAKV+TL
Sbjct: 41 LDHYAIIKFPLPTESAMKKIEDDDILVFPADIKVN----KQVVKKLYDIYVAKVSTLFWL 96
Query: 490 DGKKK 504
DG+KK
Sbjct: 97 DGEKK 101
>UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27;
Archaea|Rep: 50S ribosomal protein L23P - Methanopyrus
kandleri
Length = 95
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/65 (47%), Positives = 45/65 (69%)
Frame = +1
Query: 313 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPD 492
D ++++ +P+ +E AM+ +E N L FIV AN IK AV++L+D+ V KVNTLI P
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPT 70
Query: 493 GKKKA 507
G+KKA
Sbjct: 71 GEKKA 75
>UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L23A -
Guillardia theta (Cryptomonas phi)
Length = 117
Score = 65.7 bits (153), Expect = 8e-10
Identities = 31/73 (42%), Positives = 49/73 (67%)
Frame = +1
Query: 286 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVA 465
K++ KRN + Y + +P+TSE+AMKKI+ +NTL F+V N + +K + KL+ +
Sbjct: 26 KNIQKRNFI--YKQLIYPVTSESAMKKIQTSNTLTFLVEPMNNKNSLKKIISKLFKVKTI 83
Query: 466 KVNTLIRPDGKKK 504
K+N+LI +GKKK
Sbjct: 84 KINSLISMNGKKK 96
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +1
Query: 271 PKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLY 450
P YPR + K + D +++++P+ ++ +IE NNT+VFIV A+ I+ A + ++
Sbjct: 43 PLYPRNPIKKGSWDDPCDLLRYPIKTDENTTQIEKNNTIVFIVDRRASKPEIRKAFETVF 102
Query: 451 DINVAKVNTLIRPDGKKKA 507
+ VA+VNTLI P G KKA
Sbjct: 103 ETKVARVNTLITPLGLKKA 121
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPK 250
+ALKAQ+ ++ HG RV +KIR +VHF RPK
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPK 35
>UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L23P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 86
Score = 59.7 bits (138), Expect = 5e-08
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
MD Y++I P SE M +I D N + F+V SAN IK A + LYD V VNT I P
Sbjct: 1 MDPYSVIIKPQLSEKTMNQIYDENKITFVVRRSANKRVIKEAFQDLYDTKVVGVNTHITP 60
Query: 490 DGKKKASYD 516
G K A+ +
Sbjct: 61 RGNKVATIE 69
>UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L23,
putative - Trichomonas vaginalis G3
Length = 140
Score = 55.6 bits (128), Expect = 8e-07
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +1
Query: 202 EESTENSQLCAFPQTQDVEPPRHPKYPRKSL-PKRNRMDAYNIIKFPLTSEAAMKKIEDN 378
+E T+ F + PR P + K++ P + + Y II+ P+TS+ + KIE+
Sbjct: 18 KEVTKTRNFTKFGKNAAQVVPRRPAFEHKAVKPVSLKHNDYKIIRGPVTSDKSTVKIENE 77
Query: 379 NTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
NT+ F V A I AA +LY + KV T+I KKA
Sbjct: 78 NTMTFWVDIKATKTEIAAAFNRLYKVKPVKVCTVITSKFVKKA 120
>UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Uncultured methanogenic archaeon RC-I
Length = 82
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
IIK+P +E A ++ NNTL F+V A IK A++++Y++ V KV T I G KK
Sbjct: 2 IIKYPFITEKATLSLDKNNTLQFMVDMRATKPQIKKAIEEMYNVKVVKVTTQITARGGKK 61
Query: 505 A 507
A
Sbjct: 62 A 62
>UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Archaeoglobus fulgidus
Length = 83
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
+IK L +E ++ ++E N L IV A HIK ++KL+++ V +VNTLI P G+KK
Sbjct: 4 LIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKK 62
Query: 505 A 507
A
Sbjct: 63 A 63
>UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
50S ribosomal protein L23P - Methanobacterium
thermoautotrophicum
Length = 86
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
MD Y +I P +E +M I+ NN L F+V + ++ A ++L+ + V +VNT + P
Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTP 60
Query: 490 DGKKKA 507
G+K A
Sbjct: 61 RGQKIA 66
>UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000;
n=1; Mus musculus|Rep: PREDICTED: similar to hCG2001000
- Mus musculus
Length = 137
Score = 50.0 bits (114), Expect = 4e-05
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +1
Query: 292 LPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKK---LYDINV 462
+P+R+++ + I P + + ++ EDN T VF V AN +K AVKK + DI +
Sbjct: 47 MPRRSQLKHHQI---PPDNWVSQEETEDN-TSVFTVDVQANKSQMKEAVKKVNDICDIAM 102
Query: 463 AKVNTLIRPDGKKK 504
AKVNTLIRP+G+ K
Sbjct: 103 AKVNTLIRPNGENK 116
>UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1;
Methanospirillum hungatei JF-1|Rep: 50S ribosomal
protein L23P - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 82
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
I+K+P +E A +E + L FIV A+ IK A++K++D V +V TL+ G+KK
Sbjct: 2 ILKYPYATEKASMIVERDGQLQFIVDRKASKGQIKVAIEKMFDQPVTRVRTLMNNRGEKK 61
Query: 505 A 507
A
Sbjct: 62 A 62
>UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L23P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 85
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +1
Query: 316 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDG 495
++++IK P +E AM ++ N L F V A+ + AV++ YD+ V +VNT DG
Sbjct: 2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDG 61
Query: 496 KKKA 507
+KKA
Sbjct: 62 EKKA 65
>UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 107
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +1
Query: 319 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGK 498
Y++++ PL +E A + + N +VF V SA IKAAV+KL+++ V VNTL++ GK
Sbjct: 16 YDVVRAPLITEKATL-LSERNQVVFKVAPSATKPQIKAAVEKLFNVKVTGVNTLVQ-KGK 73
Query: 499 KK 504
K
Sbjct: 74 VK 75
>UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Rhodopseudomonas palustris
Length = 99
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +1
Query: 319 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGK 498
Y++I P+ +E + E +N +VF V A IK AV+KL+D+ V VNTL+R GK
Sbjct: 9 YDVIVAPVVTEKSTMASE-HNKVVFKVQGGATKPQIKEAVEKLFDVKVKSVNTLVR-KGK 66
Query: 499 KKA 507
KA
Sbjct: 67 TKA 69
>UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7;
Bacilli|Rep: 50S ribosomal protein L23 - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 97
Score = 46.8 bits (106), Expect = 4e-04
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL-IR 486
M Y+II+ P+ +EA+M + D F V + A+ IK AV+ ++D+ VA VNT+ ++
Sbjct: 1 MSLYDIIRKPIITEASMAAM-DQKKYTFEVDSRAHKLLIKQAVEAVFDVKVASVNTISVK 59
Query: 487 PDGKKKASYDSLEIMTHWTLPTKLASYKLFHIF*E 591
P K+ Y + + T K IF E
Sbjct: 60 PKSKRVGKYTGTKSGYKKAIVTLTEDSKKIEIFGE 94
>UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11;
Bacteria|Rep: 50S ribosomal protein L23 - Geobacter
sulfurreducens
Length = 94
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
M+ Y++IK PL +E + + N + F V AN IK AV+KL+ + VA+VNT +
Sbjct: 1 MNLYDVIKKPLITEKTTIEKDSKNVVSFEVDRDANKIEIKEAVEKLFKVEVAEVNT-VNV 59
Query: 490 DGKKK 504
GK K
Sbjct: 60 AGKVK 64
>UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivirga
maquilingensis IC-167|Rep: 50S ribosomal protein L23 -
Caldivirga maquilingensis IC-167
Length = 86
Score = 46.4 bits (105), Expect = 5e-04
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
I +F LT E A++ E NTL +V S N IK V+K Y + V V TLI +G+KK
Sbjct: 7 ITRFVLT-EKAIRLAEKENTLTIVVPRSVNKKVIKDYVEKAYKVKVIDVRTLITMEGEKK 65
Query: 505 A 507
A
Sbjct: 66 A 66
>UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Thalassiosira pseudonana|Rep: Chloroplast 50S
ribosomal protein L23 - Thalassiosira pseudonana (Marine
diatom)
Length = 98
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +1
Query: 304 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLI 483
N +D N+IK+P+ ++ A + + NN FIV ++ IKAA++ L+++ V K+NT
Sbjct: 3 NSLDM-NVIKYPIITDKATRLLA-NNQYSFIVSPKSDKPTIKAAIEYLFNVKVVKINTAH 60
Query: 484 RPDGKKK 504
P KK+
Sbjct: 61 LPKKKKR 67
>UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L23 - Gracilaria tenuistipitata var. liui (Red alga)
Length = 103
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 322 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLI-RPDGK 498
+IIK+P+ ++ + IE+N F V A IK A+++L+D+ V ++NTLI +P K
Sbjct: 14 DIIKYPILTDKTTQMIEENK-YSFAVEVKAKKPKIKEAIEQLFDVKVQQINTLIVKPQKK 72
Query: 499 KKASY 513
+ Y
Sbjct: 73 RVGKY 77
>UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L23 - Lentisphaera araneosa HTCC2155
Length = 93
Score = 45.6 bits (103), Expect = 9e-04
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
M Y +IK + +E + +ED N F V +SAN I AV+K++++ V VNT+
Sbjct: 1 MSNYKVIKTVVLTEKSSAAMEDQNKYTFKVASSANKIEIANAVQKIFNVKVQSVNTM-NY 59
Query: 490 DGKKK 504
GKKK
Sbjct: 60 TGKKK 64
>UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Shigella flexneri
Length = 100
Score = 45.6 bits (103), Expect = 9e-04
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
+++ P SE A +E +NT+V V A IKAAV+KL+++ V VNTL+ GK K
Sbjct: 10 VLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLV-VKGKVK 68
Query: 505 ASYDSLEIMTHW 540
+ + W
Sbjct: 69 RHGQRIGRRSDW 80
>UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 100
Score = 45.6 bits (103), Expect = 9e-04
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
++ P SE A E NNT+VF V AN IKAAV+KL+++ V V T + GK K
Sbjct: 10 VVLAPHVSEKATLAAEVNNTVVFKVLKDANKEEIKAAVEKLFEVEVNSVRT-VNVKGKTK 68
>UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal protein
L23; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to 50S ribosomal protein L23 -
Candidatus Kuenenia stuttgartiensis
Length = 93
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
MD Y++IK PL +E ++ E N+ F V AN IK A++ ++ + V V TLI+
Sbjct: 1 MDKYDVIKGPLRTEKSVSDGEKTNSYHFDVDLKANKIQIKNAIEGIFGVKVNGVRTLIKK 60
Query: 490 DGKKKASY 513
+++ +
Sbjct: 61 SKRRRVKF 68
>UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10;
Bacteria|Rep: 50S ribosomal protein L23 - Aquifex
aeolicus
Length = 103
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +1
Query: 319 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGK 498
+ II P+ +E + + +ED N F V A+ IK AV+KL+++ V KVNT+I K
Sbjct: 7 WEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKK 66
Query: 499 KK 504
K+
Sbjct: 67 KR 68
>UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L25/L23
- Methanoregula boonei (strain 6A8)
Length = 83
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 328 IKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
+K P +E AM +E+ + L F+V A IK ++K +D V V+TL+ G+KKA
Sbjct: 4 LKHPFVTEKAMVLLENESKLQFLVDRKATKQDIKREIEKAFDQKVKSVHTLMSMHGEKKA 63
>UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2;
environmental samples|Rep: 50S ribosomal protein L23 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 96
Score = 44.0 bits (99), Expect = 0.003
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAM--KKIED--------NNTLVFIVHTSANXHHIKAAVKKLYDIN 459
+D Y++IK P +E + +++ D NN + FIV IKAAV++L D+
Sbjct: 2 IDPYSVIKMPWITEKTLEARRVSDKEGGYRENNNRIEFIVRRETTKADIKAAVEELLDVQ 61
Query: 460 VAKVNTLIRPDGK 498
V KVNT I GK
Sbjct: 62 VVKVNTRITITGK 74
>UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L23P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 82
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 328 IKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
I +P +E AM + D N L FIV T +N I V+KLY V V T+ G KKA
Sbjct: 4 INYPFVTEKAMMLL-DENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKA 62
>UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L23 - Psychroflexus torquis ATCC 700755
Length = 63
Score = 42.7 bits (96), Expect = 0.006
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
M+AY+II P +E +M+ L FIV SA+ I AV+ ++D+ V KVN
Sbjct: 1 MNAYDIIIQPWLTEKSMEARSTQQRLEFIVRRSASKDDIAKAVETIFDVEVEKVNVRNSK 60
Query: 490 DGK 498
GK
Sbjct: 61 HGK 63
>UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7;
Bacteria|Rep: 50S ribosomal protein L23 - Thermotoga
maritima
Length = 100
Score = 42.3 bits (95), Expect = 0.008
Identities = 21/74 (28%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 298 KRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNT 477
K+ ++ ++++ P+ +E A+ + + VF V+ AN + +K AV+KL+++ V KVN
Sbjct: 2 KQEKLSLHDVLIRPIITEKALI-LREQRKYVFEVNPLANKNLVKEAVEKLFNVKVEKVNI 60
Query: 478 L-IRPDGKKKASYD 516
L ++P K++ ++
Sbjct: 61 LNMKPKPKRRGIFE 74
>UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1;
Bacteroides capillosus ATCC 29799|Rep: 50S ribosomal
protein L23 - Bacteroides capillosus ATCC 29799
Length = 99
Score = 41.9 bits (94), Expect = 0.011
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +1
Query: 316 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDG 495
AY+IIK P+ +E +M+ E F V SAN I AV++++ + V KVNTL G
Sbjct: 5 AYDIIKRPVITEQSMEMTEMKR-YTFEVAKSANKIEIAKAVEEIFGVKVVKVNTL-NMQG 62
Query: 496 KKK 504
K+K
Sbjct: 63 KEK 65
>UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Flavobacterium hibernum
Length = 96
Score = 41.9 bits (94), Expect = 0.011
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 322 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL-IRPDGK 498
+II P+ +E K+ E N F+V AN IK AV+ Y + + VNT+ +RPD
Sbjct: 2 SIIIRPIVTEKVTKESEVLNRFGFVVDKKANKVQIKKAVEAAYGVTIVSVNTMNVRPDRT 61
Query: 499 KKASYDSL 522
K + L
Sbjct: 62 TKYTKSGL 69
>UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Emiliania huxleyi|Rep: Chloroplast 50S ribosomal
protein L23 - Emiliania huxleyi
Length = 99
Score = 41.9 bits (94), Expect = 0.011
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 322 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKK 501
++IK+P+ +E + IE N F V A+ IK+AV+ L+D+ V VNT +P K+
Sbjct: 10 DLIKYPILTEKTSRLIEQNQ-YSFAVDRKADKISIKSAVEALFDVQVVAVNTANQPLKKR 68
Query: 502 K 504
+
Sbjct: 69 R 69
>UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L23 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 82
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
I+K P +E A +E + L FIV A IK ++ ++ VA V T++ G+KK
Sbjct: 2 ILKHPFVTEKATMMLEGESKLQFIVQRDATKQDIKRELESAFEQEVANVRTMMTMKGEKK 61
Query: 505 A 507
A
Sbjct: 62 A 62
>UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36;
Bacteria|Rep: 50S ribosomal protein L23 -
Propionibacterium acnes
Length = 102
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +1
Query: 313 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIR 486
D +II P+ SE + + D NT F+V +AN IK A+++++ + V VNT+ R
Sbjct: 8 DPRDIILAPVVSEKSYGLL-DQNTYTFVVKPTANKTEIKIAIEQIFGVKVTSVNTMNR 64
>UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L23P -
Picrophilus torridus
Length = 82
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 337 PLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKK 501
P+ +E +E N + F+V+ A IK V+ +++ VAKVN +I +GKK
Sbjct: 7 PIVTEKTTLMMEKENKITFLVNRKATKEAIKNEVEARFNVKVAKVNMMIAKNGKK 61
>UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23;
Firmicutes|Rep: 50S ribosomal protein L23 - Dorea
longicatena DSM 13814
Length = 101
Score = 40.7 bits (91), Expect = 0.025
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 319 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLY-DINVAKVNTLIRPDG 495
Y++I P+ +E +M+ + + F+VH A IK AV+K++ V KVNT+ DG
Sbjct: 7 YDVILKPVVTEKSMELMGEKK-YTFLVHPEATKSQIKEAVEKMFTGTKVEKVNTM-NNDG 64
Query: 496 KKK 504
KKK
Sbjct: 65 KKK 67
>UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila
melanogaster|Rep: GM06171p - Drosophila melanogaster
(Fruit fly)
Length = 290
Score = 40.7 bits (91), Expect = 0.025
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +3
Query: 276 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKXAPYQGCSQETL*Y 455
+P+E+ A ++ HG +QHH +P+ +EED QH GL + + P S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222
Query: 456 KCC*SQHTHQA*W*EESV 509
+ + H A W EE +
Sbjct: 223 QGGQGERAHPARWPEEGL 240
>UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2;
Mycoplasma|Rep: 50S ribosomal protein L23 - Mycoplasma
pneumoniae
Length = 237
Score = 40.7 bits (91), Expect = 0.025
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 310 MDAYNIIKFP-LTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIR 486
MD N++ P LT + ++ + VF+V+ A+ +K A + +Y I KVNTLIR
Sbjct: 1 MDVTNVLLKPVLTEKVYFNQMGETKKYVFVVNPKASKTRVKLAFELVYGIKPLKVNTLIR 60
Query: 487 P-----DGKKKASYDSLEIMTHWTLPTKLA 561
G + LE + TLP +A
Sbjct: 61 KPTTIRGGSRFPGLSKLEKLAVITLPKGIA 90
>UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein L23 - Mycoplasma
mobile
Length = 213
Score = 39.9 bits (89), Expect = 0.044
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
M+ IIK+PL +E + K + N VF V A IK A++ ++++ V K+N P
Sbjct: 1 MNHNEIIKYPLLTEKSYKTMA-QNVYVFAVDRRARKIEIKDAIEFIFEVKVEKINLFNVP 59
Query: 490 DGKKK 504
+KK
Sbjct: 60 QKEKK 64
>UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L23 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 103
Score = 39.9 bits (89), Expect = 0.044
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 301 RNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL 480
R M AY+II P+ +E + E N VF V+ AN + AA+K+L+++ N L
Sbjct: 3 RISMKAYDIIVSPMLTEKTNTQRESINVYVFKVNKRANKKEVGAAIKELFNVTPVSCNLL 62
>UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 120
Score = 39.5 bits (88), Expect = 0.058
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +1
Query: 361 KKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKASYDSLEIMTHW 540
K E+ N ++F S IK +K LYD+NV KVNT I G+ K+ L+ +
Sbjct: 33 KTFENTNKIMFKTDCSVGKTDIKTYMKALYDVNVDKVNT-INVQGRIKSKTKGLQKRSKL 91
Query: 541 TLPTKLASYK 570
K YK
Sbjct: 92 NSKYKTPDYK 101
>UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26;
Firmicutes|Rep: 50S ribosomal protein L23 - Clostridium
acetobutylicum
Length = 98
Score = 39.1 bits (87), Expect = 0.077
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = +1
Query: 313 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNT 477
++++II+ P+ +E +M ++ D FIV AN IK A+++++ + V KVNT
Sbjct: 4 NSHDIIRKPVITEKSMAEMADKK-YTFIVDPHANKVQIKKAIEEVFGVKVEKVNT 57
>UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Bacteroides thetaiotaomicron
Length = 96
Score = 39.1 bits (87), Expect = 0.077
Identities = 28/79 (35%), Positives = 38/79 (48%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
IIK PL +E + N F+V AN IK V+ LY++ V VNT ++ GK K
Sbjct: 4 IIK-PLVTEKMTAITDKLNRFGFVVRPDANKLEIKKEVEALYNVTVVDVNT-VKYAGKNK 61
Query: 505 ASYDSLEIMTHWTLPTKLA 561
+ Y I+ T K A
Sbjct: 62 SRYTKAGIINGRTNAFKKA 80
>UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2;
Wolbachia|Rep: 50S ribosomal protein L23 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 95
Score = 39.1 bits (87), Expect = 0.077
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL-IRP 489
NI+K P+ +E A E N V + N H IK+A++ L+++ V+ +N + ++P
Sbjct: 6 NIVKCPIITEKASFLREKFNKYSLYVFVNVNKHKIKSAIESLFNVKVSSINVVRVKP 62
>UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14;
Bacteria|Rep: 50S ribosomal protein L23 - Thermus
thermophilus
Length = 96
Score = 39.1 bits (87), Expect = 0.077
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +1
Query: 316 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDG 495
AY++I P+ SE A + F VH A IK AV+ + + V KVNTL G
Sbjct: 4 AYDVILAPVLSEKAYAGFAEGK-YTFWVHPKATKTEIKNAVETAFKVKVVKVNTL-HVRG 61
Query: 496 KKK 504
KKK
Sbjct: 62 KKK 64
>UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L23 -
Candidatus Pelagibacter ubique HTCC1002
Length = 97
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/68 (26%), Positives = 39/68 (57%)
Frame = +1
Query: 304 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLI 483
+++ Y+ I P+ +E + + N +VF V +AN ++K ++K++ +NV K+N +
Sbjct: 2 DKIHLYDKILSPMVTEKTTN-LSEQNKIVFKVPRAANKTNLKKNIEKIFKVNVTKINIIN 60
Query: 484 RPDGKKKA 507
+ + K A
Sbjct: 61 KQNRTKVA 68
>UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L25/L23 - Candidatus Nitrosopumilus maritimus SCM1
Length = 88
Score = 37.9 bits (84), Expect = 0.18
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +1
Query: 316 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDG 495
A II P +E +E+ + + FIV SA+ I AV LY+ V VNT G
Sbjct: 6 ASKIILKPYITEKTFAMVENESKICFIVERSASKPEISEAVNTLYNEKVLNVNTARTIYG 65
Query: 496 KK 501
KK
Sbjct: 66 KK 67
>UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellular
organisms|Rep: 50S ribosomal protein L23 -
Prochlorococcus marinus
Length = 102
Score = 37.9 bits (84), Expect = 0.18
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 322 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP 489
++I+ PL +E A K ++ N + H +A IKAAV+KL+D+ V ++T+ P
Sbjct: 11 DVIRRPLITEKATKGLDINQYTFEVDHRAAKPD-IKAAVEKLFDVKVIGISTMNPP 65
>UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16;
Actinomycetales|Rep: 50S ribosomal protein L23 -
Streptomyces coelicolor
Length = 139
Score = 37.5 bits (83), Expect = 0.23
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +1
Query: 313 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPD 492
D +++ P+ SE + + D N F+V +N IK AV+ ++ + V VNT+ R
Sbjct: 45 DPRDVLLKPVVSEKSYALL-DENKYTFVVAPGSNKTQIKEAVQAVFSVKVTGVNTINR-Q 102
Query: 493 GKKK 504
GK+K
Sbjct: 103 GKRK 106
>UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1;
Mariprofundus ferrooxydans PV-1|Rep: 50S ribosomal
protein L23 - Mariprofundus ferrooxydans PV-1
Length = 99
Score = 37.5 bits (83), Expect = 0.23
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 319 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGK 498
+NI++ P+ +E + N F V A+ +KAA++ ++++NV KV + P
Sbjct: 8 FNILRQPVITEKSYTATGAANQYTFRVAREASKAQVKAAIEAIFEVNVDKVQVINMPSKP 67
Query: 499 KKASYDS 519
K+ S
Sbjct: 68 KRRGAQS 74
>UniRef50_Q6BQ62 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 392
Score = 37.5 bits (83), Expect = 0.23
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Frame = +1
Query: 196 TWEESTENSQLCAFPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 375
+++ES N L AF D + P P +K KRN+M YN+ P + E
Sbjct: 225 SYKESHINDCLIAFDFNGDRDRPDSPVRSKKRSHKRNKMLVYNMPPIPRPKYETIPNAEG 284
Query: 376 NNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL---------IRPDGKKKASYDSLE 525
N+ +H + I + ++ D V N I+P +K+ YDS++
Sbjct: 285 NSYDTLRLHPHSIQSPIDSQIEDESDFQVLNPNDFVGSMTSNLTIQPGAEKQLPYDSVD 343
>UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candidatus
Blochmannia floridanus|Rep: 50S ribosomal protein L23 -
Blochmannia floridanus
Length = 99
Score = 37.1 bits (82), Expect = 0.31
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKK 504
+IK P SE + ++ NN +V V I+ AV L+ + + K+N L+ GK K
Sbjct: 9 VIKAPHVSEKSSIALDKNNVIVLKVVNYVTKQDIRHAVCMLFSVKIKKINVLM-VSGKSK 67
Query: 505 ASYDSLEIMTHW 540
+L +W
Sbjct: 68 GQRYNLGYRCNW 79
>UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L23 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 98
Score = 36.7 bits (81), Expect = 0.41
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 319 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGK 498
Y++I P+ +E + E +F+V +AN ++I A++ ++++NV KVN +I GK
Sbjct: 6 YDLIVKPVVTEKSTLASECKK-YIFLVQRNANKYNISKAIEGIFNVNVIKVN-IINMIGK 63
Query: 499 KK 504
K
Sbjct: 64 TK 65
>UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L23 - candidate division TM7 genomosp. GTL1
Length = 102
Score = 36.3 bits (80), Expect = 0.54
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1
Query: 337 PLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLI 483
P SE A NT VF+V N I AV Y + VAKV TL+
Sbjct: 8 PRVSEKAYGLASVGNTYVFVVPIKVNKQQIADAVATQYGVKVAKVTTLV 56
>UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8;
Francisella tularensis|Rep: 50S ribosomal protein L23 -
Francisella tularensis subsp. tularensis (strain FSC
198)
Length = 99
Score = 35.5 bits (78), Expect = 0.95
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 337 PLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL 480
P S+ + N+T+VF V AN +K AV+KL+++ V VN L
Sbjct: 14 PHVSDKTYGLSDANSTIVFEVARFANKQDVKNAVEKLFEVKVESVNIL 61
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 161 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPK 250
ALK ++ ++G H R RKI V FRRPK
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPK 72
>UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Stigeoclonium helveticum|Rep: Chloroplast 50S
ribosomal protein L23 - Stigeoclonium helveticum (Green
alga)
Length = 118
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +1
Query: 322 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKK 501
++IK+P+ + + + + NN +F V IK +++ +++NV VNT RP KK
Sbjct: 3 DLIKYPVINFKSYRALVLNNQYMFNVDLRLTKPQIKKLIEQYFEVNVISVNT-HRPPRKK 61
Query: 502 K 504
+
Sbjct: 62 R 62
>UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
synoviae 53|Rep: 50S ribosomal protein L23 - Mycoplasma
synoviae (strain 53)
Length = 158
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 310 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTL 480
M+ +I+ P+ +E + + D F V AN H IK AV+ ++ + V VNT+
Sbjct: 1 MELTRVIQAPIITEKTDRLLLDRK-YTFKVDYFANKHQIKQAVETIFKVEVVDVNTI 56
>UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 964
Score = 33.9 bits (74), Expect = 2.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -1
Query: 453 IIEFLDCSLDMVLVCTCVNNKDQGVVIFNLLHCCFRREREFN-DVVGIHA-ISLRQRLPW 280
++E +C + V V V K + VV+ HC R + N D+ I RQ LPW
Sbjct: 119 VLECYNCGNENVFVLGFVTAKLENVVVLLCRHCIQRSPSDANWDIREWQTLIEDRQFLPW 178
Query: 279 VFRVPRR 259
+ +PRR
Sbjct: 179 LVPIPRR 185
>UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycoplasma
gallisepticum|Rep: 50S ribosomal protein L23 -
Mycoplasma gallisepticum
Length = 108
Score = 33.9 bits (74), Expect = 2.9
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +1
Query: 325 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRP----- 489
+IK LT + + + F+V+ AN ++IK A K +Y + VNT I+
Sbjct: 7 LIKPILTEKTYGIMMSEPRKYTFLVNAKANKNYIKQAFKAIYGVTPIAVNTKIKKPARVR 66
Query: 490 DGKKKASYDSLEIMTHWTLP 549
G + Y LE + T+P
Sbjct: 67 TGTQNPGYSRLEKIAIITVP 86
>UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces
cerevisiae YNL249c MPA43; n=1; Kluyveromyces lactis|Rep:
Similar to sp|P53583 Saccharomyces cerevisiae YNL249c
MPA43 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 516
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 468 FSNIYIIEFLDCSLDMVLVCTCV--NNKDQGVVIFNLLH 358
F+ +YI E+ CSL + C+ V KD+ ++ FNL+H
Sbjct: 60 FNTLYIQEYNICSLGVGATCSMVVGKQKDENLIPFNLIH 98
>UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellular
organisms|Rep: 50S ribosomal protein L23P - Nanoarchaeum
equitans
Length = 78
Score = 33.1 bits (72), Expect = 5.0
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 340 LTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 507
L +E A++ +E NT+ +V IK +K V KVNTLI G KKA
Sbjct: 4 LQTEKALRLLEQYNTITILVPREYTKSKIKEFFEKK-GYKVKKVNTLITKKGLKKA 58
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 32.7 bits (71), Expect = 6.7
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = -2
Query: 356 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSTSWVCGNAQSCEFSVLSSHVHLL 186
A S V NLM+ S FLLG F GYLGCL + V G ++ SV +S +L
Sbjct: 166 AYSVVSRNLMIARWSSLFLLGVLFQGYLGCLRSHS--VLGRRKAQLLSVSTSQTSIL 220
>UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Scenedesmus obliquus|Rep: Chloroplast 50S ribosomal
protein L23 - Scenedesmus obliquus
Length = 90
Score = 32.7 bits (71), Expect = 6.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 322 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANXHHIKAAVKKLYDINVAKVNTLIRPDGKK 501
+ IK+P+T+E + + N F V IK + L+ +NV +NT RP KK
Sbjct: 4 DFIKYPVTTEKSYLSMFKNKQYTFDVDLRLTKPQIKKLFETLFGVNVIGINT-HRPPRKK 62
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,832,790
Number of Sequences: 1657284
Number of extensions: 9235345
Number of successful extensions: 27483
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 26692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27471
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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