Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0512
(594 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 146 2e-35
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 146 2e-35
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 146 2e-35
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 145 3e-35
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 41 0.001
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 1.6
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 1.6
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 28 8.3
BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro... 28 8.3
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 28 8.3
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 28 8.3
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P... 28 8.3
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 28 8.3
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 28 8.3
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 28 8.3
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 28 8.3
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 146 bits (354), Expect = 2e-35
Identities = 70/104 (67%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + ++ PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H AN
Sbjct: 159 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 218
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
+H++AAV+KLYDI VAKVN LIRPDG+KKA YD+L+I
Sbjct: 219 KNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 262
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 161 ALKAQRKVVKGEHGKRVRKIRNSVHFRRP 247
A K Q+K++KG G R RKIR +VHFRRP
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRP 162
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRLARDYDALD+ANKIGII
Sbjct: 247 KKAYVRLARDYDALDIANKIGII 269
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 146 bits (354), Expect = 2e-35
Identities = 70/104 (67%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + ++ PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H AN
Sbjct: 159 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 218
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
+H++AAV+KLYDI VAKVN LIRPDG+KKA YD+L+I
Sbjct: 219 KNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 262
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRLARDYDALD+ANKIGII
Sbjct: 247 KKAYVRLARDYDALDIANKIGII 269
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 161 ALKAQRKVVKGEHGKRVRKIRNSVHFRRP 247
A K Q+K++K G R RKIR +VHFRRP
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRP 162
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 146 bits (354), Expect = 2e-35
Identities = 70/104 (67%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + ++ PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H AN
Sbjct: 167 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 226
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
+H++AAV+KLYDI VAKVN LIRPDG+KKA YD+L+I
Sbjct: 227 KNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 270
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 161 ALKAQRKVVKGEHGKRVRKIRNSVHFRRP 247
A K Q+K++KG G R RKIR +VHFRRP
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRP 170
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRLARDYDALD+ANKIGII
Sbjct: 255 KKAYVRLARDYDALDIANKIGII 277
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 145 bits (352), Expect = 3e-35
Identities = 70/104 (67%), Positives = 83/104 (79%), Gaps = 6/104 (5%)
Frame = +1
Query: 235 FPQTQDVEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 414
F + ++ PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H AN
Sbjct: 167 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 226
Query: 415 XHHIKAAVKKLYDINVAKVNTLIRPDGKKKA------SYDSLEI 528
H++AAV+KLYDI VAKVN LIRPDG+KKA YD+L+I
Sbjct: 227 KSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 270
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 161 ALKAQRKVVKGEHGKRVRKIRNSVHFRRP 247
A K Q+K++KG G R RKIR +VHFRRP
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRP 170
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +3
Query: 498 EESVVRLARDYDALDVANKIGII 566
+++ VRLARDYDALD+ANKIGII
Sbjct: 255 KKAYVRLARDYDALDIANKIGII 277
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +3
Query: 276 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKXAPYQGCSQETL*Y 455
+P+E+ A ++ HG +QHH +P+ +EED QH GL + + P S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222
Query: 456 KCC*SQHTHQA*W*EESV 509
+ + H A W EE +
Sbjct: 223 QGGQGERAHPARWPEEGL 240
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 199 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 107
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 199 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 107
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 375
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p protein.
Length = 1761
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 368 LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 466
L + PW L F ++ TS+I R SM+ +LL
Sbjct: 1124 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1156
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 375
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 375
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
isoform C protein.
Length = 1997
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 368 LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 466
L + PW L F ++ TS+I R SM+ +LL
Sbjct: 1360 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1392
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 375
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 375
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 375
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 375
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,207,492
Number of Sequences: 53049
Number of extensions: 444494
Number of successful extensions: 1470
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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