Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0511
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    26   1.1  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   1.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.5  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   4.5  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   7.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.8  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   7.8  
AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    23   7.8  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = -2

Query: 500 LLGHQILTYFLHVLICLSHFSKIIIRSSSGNTKFFELFKSFYYSSLCLS 354
           L+G+ +  Y++ +L+ +     I+      NTK  +L  S+Y ++L +S
Sbjct: 36  LIGNFLNFYYMPLLVVVGSIGNILSVLVFFNTKLKKLSSSYYLAALGIS 84


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 200 QQSRLWLQTLRYKCKKQHK 256
           +Q ++W Q  R K KK+HK
Sbjct: 322 RQIKIWFQNRRMKWKKEHK 340


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 200 QQSRLWLQTLRYKCKKQHKKEES 268
           +Q ++W Q  R K +KQ KK E+
Sbjct: 257 RQVKIWFQNRRAKDRKQKKKAET 279


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +2

Query: 206 SRLWLQTLRYKCKKQ 250
           S +W ++L+++C+KQ
Sbjct: 775 SSIWAESLKFECRKQ 789


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 285 PYYFLSDSSFLC 250
           PY F+ DSSF+C
Sbjct: 506 PYPFILDSSFVC 517


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 112 KYTNNVADLKVKLTE 156
           +Y N+ ADLK+KL E
Sbjct: 766 RYLNSTADLKLKLGE 780


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 200 QQSRLWLQTLRYKCKKQHK 256
           +Q ++W Q  R K KK++K
Sbjct: 286 RQIKIWFQNRRMKWKKENK 304


>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = +3

Query: 333 KRENLIHRQAQAAVVEGLKKLKELGIATRRPDDYFAEMAKTDEHMQKVRKNLMAK 497
           K ENL  +  ++  +   +   +LG   +R  DY+    +   H+ + +K  +A+
Sbjct: 80  KDENLYPKDFRSRAIVDQRLHFDLGTLYQRVVDYYFPTIQLGAHLDQTKKAKLAE 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,937
Number of Sequences: 2352
Number of extensions: 9187
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)