Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0511
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051756-1|AAK93180.1|  307|Drosophila melanogaster LD28980p pro...   114   8e-26
AE014297-4719|AAF57129.1|  307|Drosophila melanogaster CG1542-PA...   114   8e-26
AE014297-2407|AAF55465.1| 1101|Drosophila melanogaster CG7397-PA...    31   0.95 
BT024209-1|ABC86271.1|  480|Drosophila melanogaster RE32713p pro...    31   1.7  
AY217746-1|AAP45004.1|  480|Drosophila melanogaster peptide rece...    31   1.7  
AE014296-1704|AAF50229.2|  359|Drosophila melanogaster CG33696-P...    31   1.7  
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro...    30   2.2  
AY089428-1|AAL90166.1|  421|Drosophila melanogaster AT25102p pro...    30   2.2  
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ...    30   2.2  
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot...    30   2.2  
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ...    30   2.2  
AE014296-1013|AAF50743.2|  421|Drosophila melanogaster CG10541-P...    30   2.2  
AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein...    30   2.9  
AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT prot...    30   2.9  
AF220096-1|AAF26436.1|  380|Drosophila melanogaster homeobox pro...    30   2.9  
AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA...    30   2.9  
X54666-1|CAA38477.1|  728|Drosophila melanogaster BRcore-TNT1-Q1...    29   3.8  
X54663-1|CAA38474.1|  663|Drosophila melanogaster BRcore-Q1-Z1 p...    29   3.8  
AL009146-4|CAA15629.1|  710|Drosophila melanogaster EG:17A9.1,FB...    29   3.8  
AE014298-238|AAN09054.1|  663|Drosophila melanogaster CG11491-PG...    29   3.8  
AE014298-237|AAF45648.1|  724|Drosophila melanogaster CG11491-PE...    29   3.8  

>AY051756-1|AAK93180.1|  307|Drosophila melanogaster LD28980p
           protein.
          Length = 307

 Score =  114 bits (275), Expect = 8e-26
 Identities = 55/94 (58%), Positives = 68/94 (72%)
 Frame = +3

Query: 243 RNSTRRKNLKENSKGNIQYDPTQDPVLNEFKRENLIHRQAQAAVVEGLKKLKELGIATRR 422
           ++  +R NL + +       P +DPVLN+FKRE L HRQAQ+AV+E + +L ELGI TRR
Sbjct: 89  KHEQKRANLFKGNAKLPYIRPEEDPVLNDFKREMLFHRQAQSAVLEAIPRLHELGIKTRR 148

Query: 423 PDDYFAEMAKTDEHMQKVRKNLMAKQAAHRASRK 524
           PDDYFAEMAK+DEHMQKVR NLMAKQ     S +
Sbjct: 149 PDDYFAEMAKSDEHMQKVRANLMAKQQGQAKSER 182



 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 32/71 (45%), Positives = 48/71 (67%)
 Frame = +1

Query: 46  QEAFAKGLIKPGLNEEIEKIEKKYTNNVADLKVKLTEIKLNLPWVEKLDLVTTIAPLAPD 225
           Q AF +G +KPGLN E      K  N+V  L  K   IK+ LPW+E+LD++ T+APLAP+
Sbjct: 24  QAAFERGDLKPGLNVEFNGQRDK-VNDVTKLLAKTEAIKMQLPWLERLDMINTLAPLAPE 82

Query: 226 VALQMQETAQE 258
           +A+Q+++  Q+
Sbjct: 83  LAVQLEKHEQK 93



 Score = 34.3 bits (75), Expect = 0.13
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +2

Query: 491 GQASSTSRVEKVRPLREQKKIAKRVQIDTTLKQAAEKKQMLE 616
           GQA S    E+++ +REQ+K+ K +   T +++ AEKK ML+
Sbjct: 176 GQAKS----ERIKQIREQRKMGKMLAKQTKVQREAEKKDMLD 213


>AE014297-4719|AAF57129.1|  307|Drosophila melanogaster CG1542-PA
           protein.
          Length = 307

 Score =  114 bits (275), Expect = 8e-26
 Identities = 55/94 (58%), Positives = 68/94 (72%)
 Frame = +3

Query: 243 RNSTRRKNLKENSKGNIQYDPTQDPVLNEFKRENLIHRQAQAAVVEGLKKLKELGIATRR 422
           ++  +R NL + +       P +DPVLN+FKRE L HRQAQ+AV+E + +L ELGI TRR
Sbjct: 89  KHEQKRANLFKGNAKLPYIRPEEDPVLNDFKREMLFHRQAQSAVLEAIPRLHELGIKTRR 148

Query: 423 PDDYFAEMAKTDEHMQKVRKNLMAKQAAHRASRK 524
           PDDYFAEMAK+DEHMQKVR NLMAKQ     S +
Sbjct: 149 PDDYFAEMAKSDEHMQKVRANLMAKQQGQAKSER 182



 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 32/71 (45%), Positives = 48/71 (67%)
 Frame = +1

Query: 46  QEAFAKGLIKPGLNEEIEKIEKKYTNNVADLKVKLTEIKLNLPWVEKLDLVTTIAPLAPD 225
           Q AF +G +KPGLN E      K  N+V  L  K   IK+ LPW+E+LD++ T+APLAP+
Sbjct: 24  QAAFERGDLKPGLNVEFNGQRDK-VNDVTKLLAKTEAIKMQLPWLERLDMINTLAPLAPE 82

Query: 226 VALQMQETAQE 258
           +A+Q+++  Q+
Sbjct: 83  LAVQLEKHEQK 93



 Score = 34.3 bits (75), Expect = 0.13
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +2

Query: 491 GQASSTSRVEKVRPLREQKKIAKRVQIDTTLKQAAEKKQMLE 616
           GQA S    E+++ +REQ+K+ K +   T +++ AEKK ML+
Sbjct: 176 GQAKS----ERIKQIREQRKMGKMLAKQTKVQREAEKKDMLD 213


>AE014297-2407|AAF55465.1| 1101|Drosophila melanogaster CG7397-PA
           protein.
          Length = 1101

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
 Frame = +3

Query: 177 GGEAGSGYNN------RASGSRRCVTNARNSTRRKNLKENSKGNI-QYD-PTQDPVLNE- 329
           GG AGSGY N      +   S  C  +  +S RR   + +SK N+  Y+  T+  V+ E 
Sbjct: 103 GGGAGSGYQNDKCDRLKKMTSITCSDSEDDSERRAQFEISSKWNLGGYEGDTRTYVVQEI 162

Query: 330 FKRENLIHRQAQAAVVEGLKKLK---ELG-IATRRPDDYFAEMAKTDEHMQKVRKNLMAK 497
           ++ E       Q  VV+ LK LK     G I TR  D+ F  +    E  +K   +L ++
Sbjct: 163 YRNEQSYVESLQTVVVKYLKVLKAPEHAGMIDTRTVDEIFFMVPDILEIHEKFLSDLKSR 222


>BT024209-1|ABC86271.1|  480|Drosophila melanogaster RE32713p
           protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -2

Query: 497 LGHQILTYFLHVLICLSHFSKIIIRSSSGNTKFFELFKSFYYSSLCLSMD*ILTLKLIQY 318
           +GH +  Y++ VL C      I+       TK  +L  SFY ++L +S D      L   
Sbjct: 57  IGHFVHQYYIPVLCCTGSIGNILSVFVFFRTKLRKLSSSFYLAALAVS-DTCFLAGLFAQ 115

Query: 317 WI 312
           W+
Sbjct: 116 WL 117


>AY217746-1|AAP45004.1|  480|Drosophila melanogaster peptide
           receptor GPCR protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -2

Query: 497 LGHQILTYFLHVLICLSHFSKIIIRSSSGNTKFFELFKSFYYSSLCLSMD*ILTLKLIQY 318
           +GH +  Y++ VL C      I+       TK  +L  SFY ++L +S D      L   
Sbjct: 57  IGHFVHQYYIPVLCCTGSIGNILSVFVFFRTKLRKLSSSFYLAALAVS-DTCFLAGLFAQ 115

Query: 317 WI 312
           W+
Sbjct: 116 WL 117


>AE014296-1704|AAF50229.2|  359|Drosophila melanogaster CG33696-PA
           protein.
          Length = 359

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -2

Query: 497 LGHQILTYFLHVLICLSHFSKIIIRSSSGNTKFFELFKSFYYSSLCLSMD*ILTLKLIQY 318
           +GH +  Y++ VL C      I+       TK  +L  SFY ++L +S D      L   
Sbjct: 57  IGHFVHQYYIPVLCCTGSIGNILSVFVFFRTKLRKLSSSFYLAALAVS-DTCFLAGLFAQ 115

Query: 317 WI 312
           W+
Sbjct: 116 WL 117


>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
          Length = 2176

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +3

Query: 177  GGEAGS----GYNNRASGSRRCVTNARNSTRRKNLKENSK 284
            GGEAGS        R+ G + CV  AR+S RRK +++  K
Sbjct: 1180 GGEAGSTAAVAVQQRSCGVKDCVEAARHSLRRKCIRKRVK 1219


>AY089428-1|AAL90166.1|  421|Drosophila melanogaster AT25102p
           protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
 Frame = +3

Query: 135 LKSQVNRDKIKSAMGGEAGSGYNNRASGSRRCVTNARNSTRR--KNLKENSKGNIQYDPT 308
           L  ++NR K  +A+  EA + Y NR      C+   ++ +    K      +G I  D  
Sbjct: 92  LVDELNRQKKTAALEDEALNTYRNRV---LNCIEFLKDKSLAICKQCLILREGRIGVDLC 148

Query: 309 QDPVLNEFKRENLIHRQAQAAVVEGLKKLKELGIATRRPDDYF--AEMAKTDEHMQKVRK 482
            D V    +RE  + +  Q      LK+ +E  I   R   Y    ++A  D+ +    K
Sbjct: 149 DDEVDRSLRRELKVIKGCQGLADAALKEAEE-QIRKLRAAIYLLDQDLAAKDKSLAIDEK 207

Query: 483 NLMAKQAAHRASRKFD 530
           NL  K+  H  ++  D
Sbjct: 208 NLKLKEFQHDLAKGQD 223


>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
            protein.
          Length = 2342

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +3

Query: 177  GGEAGS----GYNNRASGSRRCVTNARNSTRRKNLKENSK 284
            GGEAGS        R+ G + CV  AR+S RRK +++  K
Sbjct: 1345 GGEAGSTAAVAVQQRSCGVKDCVEAARHSLRRKCIRKRVK 1384


>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
            EAST protein.
          Length = 2362

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +3

Query: 177  GGEAGS----GYNNRASGSRRCVTNARNSTRRKNLKENSK 284
            GGEAGS        R+ G + CV  AR+S RRK +++  K
Sbjct: 1357 GGEAGSTAAVAVQQRSCGVKDCVEAARHSLRRKCIRKRVK 1396


>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
            protein.
          Length = 2301

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +3

Query: 177  GGEAGS----GYNNRASGSRRCVTNARNSTRRKNLKENSK 284
            GGEAGS        R+ G + CV  AR+S RRK +++  K
Sbjct: 1304 GGEAGSTAAVAVQQRSCGVKDCVEAARHSLRRKCIRKRVK 1343


>AE014296-1013|AAF50743.2|  421|Drosophila melanogaster CG10541-PA
           protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
 Frame = +3

Query: 135 LKSQVNRDKIKSAMGGEAGSGYNNRASGSRRCVTNARNSTRR--KNLKENSKGNIQYDPT 308
           L  ++NR K  +A+  EA + Y NR      C+   ++ +    K      +G I  D  
Sbjct: 92  LVDELNRQKKTAALEDEALNTYRNRV---LNCIEFLKDKSLAICKQCLILREGRIGVDLC 148

Query: 309 QDPVLNEFKRENLIHRQAQAAVVEGLKKLKELGIATRRPDDYF--AEMAKTDEHMQKVRK 482
            D V    +RE  + +  Q      LK+ +E  I   R   Y    ++A  D+ +    K
Sbjct: 149 DDEVDRSLRRELKVIKGCQGLADAALKEAEE-QIRKLRAAIYLLDQDLAAKDKSLAIDEK 207

Query: 483 NLMAKQAAHRASRKFD 530
           NL  K+  H  ++  D
Sbjct: 208 NLKLKEFQHDLAKGQD 223


>AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein
            protein.
          Length = 1384

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +3

Query: 183  EAGSGYNNR-ASGSRRCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKRENLIHRQ 359
            E  SGY +   +G++   T  + S  R   +EN     Q +P  D  + ++  +NL+ + 
Sbjct: 810  ELESGYCDAYEAGTKGAWTEEQESELRFLFEEN-----QRNPETDKDVIDWILDNLVDKT 864

Query: 360  AQAAVVEGLKKLKELGIATRRPDDYFAEMAKTDEHM 467
                 V  LKKLKELG+  + P     + A++ +++
Sbjct: 865  RNRRTV--LKKLKELGLLFKAPTKRSTKSAQSGKNV 898


>AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT protein.
          Length = 1384

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +3

Query: 183  EAGSGYNNR-ASGSRRCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKRENLIHRQ 359
            E  SGY +   +G++   T  + S  R   +EN     Q +P  D  + ++  +NL+ + 
Sbjct: 810  ELESGYCDAYEAGTKGAWTEEQESELRFLFEEN-----QRNPETDKDVIDWILDNLVDKT 864

Query: 360  AQAAVVEGLKKLKELGIATRRPDDYFAEMAKTDEHM 467
                 V  LKKLKELG+  + P     + A++ +++
Sbjct: 865  RNRRTV--LKKLKELGLLFKAPTKRSTKSAQSGKNV 898


>AF220096-1|AAF26436.1|  380|Drosophila melanogaster homeobox
           protein Scarecrow protein.
          Length = 380

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 203 QSRLWLQTLRYKCKKQHKKE 262
           Q ++W Q  RYKCK+Q K++
Sbjct: 208 QVKIWFQNHRYKCKRQAKRK 227


>AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA
            protein.
          Length = 1384

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +3

Query: 183  EAGSGYNNR-ASGSRRCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKRENLIHRQ 359
            E  SGY +   +G++   T  + S  R   +EN     Q +P  D  + ++  +NL+ + 
Sbjct: 810  ELESGYCDAYEAGTKGAWTEEQESELRFLFEEN-----QRNPETDKDVIDWILDNLVDKT 864

Query: 360  AQAAVVEGLKKLKELGIATRRPDDYFAEMAKTDEHM 467
                 V  LKKLKELG+  + P     + A++ +++
Sbjct: 865  RNRRTV--LKKLKELGLLFKAPTKRSTKSAQSGKNV 898


>X54666-1|CAA38477.1|  728|Drosophila melanogaster BRcore-TNT1-Q1-Z1
           protein.
          Length = 728

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 195 GYNNRASGSR--RCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKR 338
           G NN ASG    RC    +N +    LK + + N+   PT++PV N  KR
Sbjct: 626 GLNNSASGGDDFRCNPCNKNLSSLTRLKRHIQ-NVHMRPTKEPVCNICKR 674


>X54663-1|CAA38474.1|  663|Drosophila melanogaster BRcore-Q1-Z1
           protein.
          Length = 663

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 195 GYNNRASGSR--RCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKR 338
           G NN ASG    RC    +N +    LK + + N+   PT++PV N  KR
Sbjct: 561 GLNNSASGGDDFRCNPCNKNLSSLTRLKRHIQ-NVHMRPTKEPVCNICKR 609


>AL009146-4|CAA15629.1|  710|Drosophila melanogaster
           EG:17A9.1,FBgn0000210;br protein.
          Length = 710

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 195 GYNNRASGSR--RCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKR 338
           G NN ASG    RC    +N +    LK + + N+   PT++PV N  KR
Sbjct: 608 GLNNSASGGDDFRCNPCNKNLSSLTRLKRHIQ-NVHMRPTKEPVCNICKR 656


>AE014298-238|AAN09054.1|  663|Drosophila melanogaster CG11491-PG,
           isoform G protein.
          Length = 663

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 195 GYNNRASGSR--RCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKR 338
           G NN ASG    RC    +N +    LK + + N+   PT++PV N  KR
Sbjct: 561 GLNNSASGGDDFRCNPCNKNLSSLTRLKRHIQ-NVHMRPTKEPVCNICKR 609


>AE014298-237|AAF45648.1|  724|Drosophila melanogaster CG11491-PE,
           isoform E protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 195 GYNNRASGSR--RCVTNARNSTRRKNLKENSKGNIQYDPTQDPVLNEFKR 338
           G NN ASG    RC    +N +    LK + + N+   PT++PV N  KR
Sbjct: 622 GLNNSASGGDDFRCNPCNKNLSSLTRLKRHIQ-NVHMRPTKEPVCNICKR 670


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,250,173
Number of Sequences: 53049
Number of extensions: 401625
Number of successful extensions: 1842
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)