Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0510
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.8  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.3  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 199 FYLILRPNIKTLSLTHTL 146
           F LIL PN K + ++HT+
Sbjct: 115 FLLILTPNGKIVFVSHTV 132


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 241 SLNKSSRE*VSLTFSEITNHAYNNW 315
           S+N +S + V     + TNH +  W
Sbjct: 184 SINSTSSQPVGTQIHQQTNHTFYPW 208


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 90  RLPISAHITFVSSLL 134
           + PISAH +F+S  L
Sbjct: 66  QFPISAHFSFMSRFL 80


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 90  RLPISAHITFVSSLL 134
           + PISAH +F+S  L
Sbjct: 22  QFPISAHFSFMSRFL 36


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 183 VQILKLXLSHTPLFELTKDL 124
           + +++L L H  L   TKDL
Sbjct: 248 LSLMQLYLGHNKLLNATKDL 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,456
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)