Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0510
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015275-1|AAT94504.1|  762|Drosophila melanogaster LD18191p pro...    28   8.9  
AY095100-1|AAM11428.1|  380|Drosophila melanogaster SD10776p pro...    28   8.9  
AE014298-2204|AAN09363.1|  762|Drosophila melanogaster CG8944-PB...    28   8.9  

>BT015275-1|AAT94504.1|  762|Drosophila melanogaster LD18191p
           protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 32  TSSFLNKHKYITHCDDKKRTSSNQCAYYFCIKSFVSSN 145
           T   LN H+ I H D+++R    +C Y  C KSFV+ N
Sbjct: 645 TPGHLNAHR-IVHQDERERCY--KCDYPQCNKSFVARN 679


>AY095100-1|AAM11428.1|  380|Drosophila melanogaster SD10776p
           protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 32  TSSFLNKHKYITHCDDKKRTSSNQCAYYFCIKSFVSSN 145
           T   LN H+ I H D+++R    +C Y  C KSFV+ N
Sbjct: 263 TPGHLNAHR-IVHQDERERCY--KCDYPQCNKSFVARN 297


>AE014298-2204|AAN09363.1|  762|Drosophila melanogaster CG8944-PB,
           isoform B protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 32  TSSFLNKHKYITHCDDKKRTSSNQCAYYFCIKSFVSSN 145
           T   LN H+ I H D+++R    +C Y  C KSFV+ N
Sbjct: 645 TPGHLNAHR-IVHQDERERCY--KCDYPQCNKSFVARN 679


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,270,939
Number of Sequences: 53049
Number of extensions: 413732
Number of successful extensions: 628
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)