Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0509
         (506 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025003-1|ABE01233.1|   97|Drosophila melanogaster IP05158p pro...    29   3.6  
BT024239-1|ABC86301.1|  179|Drosophila melanogaster IP16258p pro...    29   3.6  
AE014296-2507|AAF49639.1|  142|Drosophila melanogaster CG7276-PA...    29   3.6  
AE014296-2506|AAS64993.1|  171|Drosophila melanogaster CG7276-PB...    29   3.6  

>BT025003-1|ABE01233.1|   97|Drosophila melanogaster IP05158p
           protein.
          Length = 97

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 35  CCYTAQIQYIEICDDHYTYYYDGAIFVILNSNF 133
           C Y A+  + E+ DD+ T+ +DG  F+ + + F
Sbjct: 60  CFYGARAIWDELSDDYITFTFDGGSFICIAAVF 92


>BT024239-1|ABC86301.1|  179|Drosophila melanogaster IP16258p
           protein.
          Length = 179

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 35  CCYTAQIQYIEICDDHYTYYYDGAIFVILNSNF 133
           C Y A+  + E+ DD+ T+ +DG  F+ + + F
Sbjct: 142 CFYGARAIWDELSDDYITFTFDGGSFICIAAVF 174


>AE014296-2507|AAF49639.1|  142|Drosophila melanogaster CG7276-PA,
           isoform A protein.
          Length = 142

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 35  CCYTAQIQYIEICDDHYTYYYDGAIFVILNSNF 133
           C Y A+  + E+ DD+ T+ +DG  F+ + + F
Sbjct: 105 CFYGARAIWDELSDDYITFTFDGGSFICIAAVF 137


>AE014296-2506|AAS64993.1|  171|Drosophila melanogaster CG7276-PB,
           isoform B protein.
          Length = 171

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 35  CCYTAQIQYIEICDDHYTYYYDGAIFVILNSNF 133
           C Y A+  + E+ DD+ T+ +DG  F+ + + F
Sbjct: 134 CFYGARAIWDELSDDYITFTFDGGSFICIAAVF 166


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,410,194
Number of Sequences: 53049
Number of extensions: 304839
Number of successful extensions: 828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)