Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0508
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.041
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.041
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 528 LFVFYCSLR*FTVHFHFRLAIYSRF 454
           ++ FYC+   FTVH  F L IY  F
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHFF 170



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 588 FIFF*TRVFSIMLVFP*HS*LFVFYCSLR*FTVHFHFRLAIY 463
           FI F   +  ++ ++  +    +F C+   FT+H  F L IY
Sbjct: 245 FILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIY 286



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 528 LFVFYCSLR*FTVHFHFRLAIY 463
           ++ FY +   FTVH  F L IY
Sbjct: 113 VYYFYYAFIIFTVHLLFLLCIY 134



 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 522 VFYCSLR*FTVHF 484
           +FYC    FTVHF
Sbjct: 84  LFYCPFIIFTVHF 96


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/53 (22%), Positives = 28/53 (52%)
 Frame = -3

Query: 301 IFELYFFFS*ITILYYTQHKCQNPSHYNKIHTQKSSNHVQIIASFFIINMIMI 143
           +F  +F F  ++I Y + +   NP  ++++        +   ++FFI+N++ I
Sbjct: 240 MFTSHFIFIVVSIFYMSAYLISNPIMWDRVML------LTFWSAFFIVNVLYI 286


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 209 MYFIIM*WILTFV-LCIVQDGNLTKKKIKFKYRHGFNR 319
           ++F     IL F+ L   Q  NLT  K+ + YR  + R
Sbjct: 10  LFFFSFCCILFFIYLYWQQTSNLTTSKLLYTYRQPYPR 47


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 262 LYYTQHKCQNPS 227
           LYY  H CQN S
Sbjct: 265 LYYLSHVCQNVS 276


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 281 KKIKFKYRHGFNRLFRFYY 337
           +KIK + RH F +++++ Y
Sbjct: 29  EKIKRQERHSFYKIYKYTY 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,807
Number of Sequences: 336
Number of extensions: 3214
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)