Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0506
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   8.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.3  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 18  SSTLLYHIPFLRSLPSYTYRLSRNPSISS*VYLLLYPL 131
           ++ L Y    L++  S+   L RN S+   VY++LY L
Sbjct: 111 NNNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 18  SSTLLYHIPFLRSLPSYTYRLSRNPSISS*VYLLLYPL 131
           ++ L Y    L++  S+   L RN S+   VY++LY L
Sbjct: 111 NNNLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 241 TQKNRSSKIEYKLIDN 288
           TQKN S KI   LID+
Sbjct: 81  TQKNGSKKIMRHLIDH 96


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 10  CFLLPHFSIIYHFFAHSPLTH 72
           C + P  +  YHF  H+  TH
Sbjct: 155 CPIHPGMTFRYHFNVHNSGTH 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,128
Number of Sequences: 336
Number of extensions: 2852
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)