Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0506
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY240025-1|AAP57525.1|  676|Drosophila melanogaster SLC26 membra...    28   8.9  
AY075198-1|AAL68067.1|  676|Drosophila melanogaster AT13857p pro...    28   8.9  
AE014297-4632|AAF57068.1|  676|Drosophila melanogaster CG9702-PA...    28   8.9  

>AY240025-1|AAP57525.1|  676|Drosophila melanogaster SLC26 membrane
           transporter protein protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   RNMFSSSTLLYHIPFLRSLPSY 68
           RN+F   TLL  +PFL  LP Y
Sbjct: 66  RNIFRKKTLLKRLPFLTWLPHY 87


>AY075198-1|AAL68067.1|  676|Drosophila melanogaster AT13857p
           protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   RNMFSSSTLLYHIPFLRSLPSY 68
           RN+F   TLL  +PFL  LP Y
Sbjct: 66  RNIFRKKTLLKRLPFLTWLPHY 87


>AE014297-4632|AAF57068.1|  676|Drosophila melanogaster CG9702-PA
           protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   RNMFSSSTLLYHIPFLRSLPSY 68
           RN+F   TLL  +PFL  LP Y
Sbjct: 66  RNIFRKKTLLKRLPFLTWLPHY 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,406,936
Number of Sequences: 53049
Number of extensions: 456720
Number of successful extensions: 688
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)