Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0505
(603 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q176Y4 Cluster: Heparan sulfate 2-o-sulfotransferase; n... 66 8e-10
UniRef50_Q29DH1 Cluster: GA21913-PA; n=10; Sophophora|Rep: GA219... 64 2e-09
UniRef50_Q86BJ3 Cluster: Heparan sulfate 2-O-sulfotransferase pi... 47 3e-04
UniRef50_UPI0000E45C7F Cluster: PREDICTED: hypothetical protein;... 36 0.74
UniRef50_UPI0000E4A474 Cluster: PREDICTED: similar to uronyl-2-s... 35 1.7
UniRef50_Q9LSE3 Cluster: Emb|CAA66822.1; n=4; core eudicotyledon... 33 6.9
UniRef50_P38144 Cluster: ISWI chromatin-remodeling complex ATPas... 33 6.9
UniRef50_Q6KID3 Cluster: Oligopeptide ABC transporter ATP-bindin... 32 9.1
UniRef50_Q22G02 Cluster: Putative uncharacterized protein; n=1; ... 32 9.1
>UniRef50_Q176Y4 Cluster: Heparan sulfate 2-o-sulfotransferase; n=4;
Endopterygota|Rep: Heparan sulfate 2-o-sulfotransferase
- Aedes aegypti (Yellowfever mosquito)
Length = 379
Score = 65.7 bits (153), Expect = 8e-10
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +1
Query: 328 ELNNTARAGREMLFFNRVPKVGSQTFMELLRRLAIRNQF 444
+LNNT RA ++FFNRVPKVGSQTFMELLRRLAIRN++
Sbjct: 93 DLNNTRRAEVPIIFFNRVPKVGSQTFMELLRRLAIRNEY 131
>UniRef50_Q29DH1 Cluster: GA21913-PA; n=10; Sophophora|Rep:
GA21913-PA - Drosophila pseudoobscura (Fruit fly)
Length = 403
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +1
Query: 328 ELNNTARAGREMLFFNRVPKVGSQTFMELLRRLAIRNQF 444
+LNNT +A E++FFNRVPKVGSQTFMELLRRL+ RN F
Sbjct: 103 DLNNTRKAQMELVFFNRVPKVGSQTFMELLRRLSERNNF 141
>UniRef50_Q86BJ3 Cluster: Heparan sulfate 2-O-sulfotransferase pipe;
n=2; Drosophila melanogaster|Rep: Heparan sulfate
2-O-sulfotransferase pipe - Drosophila melanogaster
(Fruit fly)
Length = 514
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1
Query: 331 LNNTARAGREMLFFNRVPKVGSQTFMELLRRLAIRNQF 444
LNNT A + +FFNRVPKVGSQ+ MEL+ RL N F
Sbjct: 206 LNNTKYAEVDFVFFNRVPKVGSQSLMELMARLGKINGF 243
>UniRef50_UPI0000E45C7F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 423
Score = 35.9 bits (79), Expect = 0.74
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 313 IPEPWELNNTARAGREMLFFNRVPKVGSQTFMELLRRLAIRNQF 444
I E + NNT + + FNRV K GS++ + LL+ LA N F
Sbjct: 150 ITEGYTWNNTREEVKRHVIFNRVGKCGSRSVLNLLQSLAKNNHF 193
>UniRef50_UPI0000E4A474 Cluster: PREDICTED: similar to
uronyl-2-sulfotransferase; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to
uronyl-2-sulfotransferase - Strongylocentrotus
purpuratus
Length = 446
Score = 34.7 bits (76), Expect = 1.7
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 364 LFFNRVPKVGSQTFMELLRRLAIRNQF 444
+F+NRV K GS++ + +LR LA++NQF
Sbjct: 147 IFYNRVGKCGSRSVIAVLRLLALKNQF 173
>UniRef50_Q9LSE3 Cluster: Emb|CAA66822.1; n=4; core
eudicotyledons|Rep: Emb|CAA66822.1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 772
Score = 32.7 bits (71), Expect = 6.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 435 SDGQSS**FHEGLTSDLGHPVEEKHLSAGSGC 340
SDG+S +G +DLGHP+E++ + S C
Sbjct: 468 SDGESQSSLEKGCDNDLGHPLEDQDAPSSSSC 499
>UniRef50_P38144 Cluster: ISWI chromatin-remodeling complex ATPase
ISW1; n=27; Dikarya|Rep: ISWI chromatin-remodeling
complex ATPase ISW1 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 1129
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 324 VGTKQHSPSRQRDAFLQQGAQGRKSDLHGTIKTTGHQKSI 443
VG H P + +L + A G+K DL GT K H S+
Sbjct: 76 VGLPPHDPESNKKRYLLKDANGKKFDLEGTTKRFEHLLSL 115
>UniRef50_Q6KID3 Cluster: Oligopeptide ABC transporter ATP-binding
protein; n=1; Mycoplasma mobile|Rep: Oligopeptide ABC
transporter ATP-binding protein - Mycoplasma mobile
Length = 850
Score = 32.3 bits (70), Expect = 9.1
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -3
Query: 199 LRIHTMTKSDHLINMNCFFCSNKFRXKHFTRSYFIVFKHYLVYIKMNCYSLVSLKLEVDG 20
+R + T D LIN SNK KH Y +FK Y +N + K+EV+
Sbjct: 381 IREYNKTLWDQLINSTNSNMSNKNVKKHIDYEYLFLFKPYEAIYSLN---KKNFKIEVES 437
Query: 19 IDK 11
I+K
Sbjct: 438 INK 440
>UniRef50_Q22G02 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2778
Score = 32.3 bits (70), Expect = 9.1
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 157 MNCFFCSNKFRXKHFTRSYFIVFKHY-LVYIKMNCYSLVSLKLEVDGIDKLDI 2
+N F SN FR ++ YF+VF Y L IKMN Y SL + ++K I
Sbjct: 1578 VNQFIYSNIFRVQYVENEYFLVFLQYGLHLIKMN-YFKTSLIQAFNNLEKSQI 1629
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,798,612
Number of Sequences: 1657284
Number of extensions: 8905562
Number of successful extensions: 19582
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19580
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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