Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0504
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    91   2e-20
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   1.9  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   2.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.4  
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    24   4.5  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   4.5  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 91.5 bits (217), Expect = 2e-20
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = +1

Query: 247 LVQFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 411
           L +FV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK TA+ + K  +KYRPE
Sbjct: 57  LSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKPTAQQVMKCWKKYRPE 111



 Score = 64.1 bits (149), Expect = 3e-12
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +3

Query: 483 TKEAQHHPIGTNTVTKLVEKKKAHFVVIAHDVDPIELVLFLPALCR 620
           +K A     G N+V K+VE+KKA  V+IAHDVDPIELV++LPALCR
Sbjct: 136 SKRANQLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCR 181



 Score = 43.6 bits (98), Expect = 5e-06
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +2

Query: 182 NPLFEKRPKNFAIGQGIQPTRDLS 253
           NPLFEKR KN+ IGQ +QP RDLS
Sbjct: 35  NPLFEKRVKNYGIGQNVQPKRDLS 58


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +1

Query: 265 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 411
           W  ++    +    + RLKV     + T+T+++  A+ +   L ++RPE
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRPE 262


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 185 PLFEKRPKNFAIGQGIQPTRDLSNL*DGPSISASSAR 295
           P F   P   + G G+Q   +LSN    P IS  + R
Sbjct: 402 PEFPPTPPQLSPGVGLQSQNNLSNTNRSPQISPFAKR 438


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 420  CFSLRPVFLQNLEKALSCSLVQCLGKLVDRRGH 322
            CF  + V ++ +    S + +  L + V RRGH
Sbjct: 1454 CFVTKAVHIELVSNLTSSAFLAALRRFVARRGH 1486


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -1

Query: 274 TWAILQIGQVTSWLNALTNSKVL--WPLLEERIHDLL 170
           TWA +    +  +LN LT + +L  +P L+E +  +L
Sbjct: 165 TWADVYFAGILDYLNYLTKTNLLENFPNLQEVVQKVL 201


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 459 LSFSSFPQPLFPGCFSLRPVFLQNLEKAL 373
           + F  F QP+F  C+ L  + L+N+   +
Sbjct: 506 IKFGLFFQPIFSVCWFLEVIALENVHSCV 534


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,252
Number of Sequences: 2352
Number of extensions: 10345
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)