Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0503
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123748-1|BAC85687.1|  655|Homo sapiens protein ( Homo sapiens ...    35   0.19 
AK123737-1|BAC85685.1|  784|Homo sapiens protein ( Homo sapiens ...    35   0.19 
AB056106-1|BAB32867.1|  486|Homo sapiens NeshBP protein.               35   0.19 
BC126124-1|AAI26125.1|  840|Homo sapiens heat shock 70kDa protei...    32   1.4  
BC126122-1|AAI26123.1|  840|Homo sapiens heat shock 70kDa protei...    32   1.4  
BC110861-1|AAI10862.1|  840|Homo sapiens heat shock 70kDa protei...    32   1.4  
AB023420-1|BAA75062.1|  840|Homo sapiens apg-2 protein.                32   1.4  

>AK123748-1|BAC85687.1|  655|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41754 fis, clone HSYRA2009075. ).
          Length = 655

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 39  VHPILNKVKPKEKTPPPSNQTAGDGQADGNKDAPSTQSQEQ-MDVE*THL*KTHNTKQ*H 215
           + P+LN+   +   P PS   +G+G   G K AP     ++ + V+ TH  K   T++  
Sbjct: 229 IRPVLNRTTTRPTRPKPSGMPSGNGVGTGVKQAPRPSGADRNVSVDSTHPTKKPGTRR-- 286

Query: 216 PP 221
           PP
Sbjct: 287 PP 288


>AK123737-1|BAC85685.1|  784|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41743 fis, clone HSYRA2005456. ).
          Length = 784

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 39  VHPILNKVKPKEKTPPPSNQTAGDGQADGNKDAPSTQSQEQ-MDVE*THL*KTHNTKQ*H 215
           + P+LN+   +   P PS   +G+G   G K AP     ++ + V+ TH  K   T++  
Sbjct: 358 IRPVLNRTTTRPTRPKPSGMPSGNGVGTGVKQAPRPSGADRNVSVDSTHPTKKPGTRR-- 415

Query: 216 PP 221
           PP
Sbjct: 416 PP 417


>AB056106-1|BAB32867.1|  486|Homo sapiens NeshBP protein.
          Length = 486

 Score = 35.1 bits (77), Expect = 0.19
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 39  VHPILNKVKPKEKTPPPSNQTAGDGQADGNKDAPSTQSQEQ-MDVE*THL*KTHNTKQ*H 215
           + P+LN+   +   P PS   +G+G   G K AP     ++ + V+ TH  K   T++  
Sbjct: 60  IRPVLNRTTTRPTRPKPSGMPSGNGVGTGVKQAPRPSGADRNVSVDSTHPTKKPGTRR-- 117

Query: 216 PP 221
           PP
Sbjct: 118 PP 119


>BC126124-1|AAI26125.1|  840|Homo sapiens heat shock 70kDa protein 4
           protein.
          Length = 840

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 45  PILNKVKPKEKTPPPSNQTA-GDGQADGNKDAPSTQSQEQ 161
           PI++K KPK + P    + A  +G  DG  D P  Q+ EQ
Sbjct: 781 PIISKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQ 820


>BC126122-1|AAI26123.1|  840|Homo sapiens heat shock 70kDa protein 4
           protein.
          Length = 840

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 45  PILNKVKPKEKTPPPSNQTA-GDGQADGNKDAPSTQSQEQ 161
           PI++K KPK + P    + A  +G  DG  D P  Q+ EQ
Sbjct: 781 PIISKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQ 820


>BC110861-1|AAI10862.1|  840|Homo sapiens heat shock 70kDa protein 4
           protein.
          Length = 840

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 45  PILNKVKPKEKTPPPSNQTA-GDGQADGNKDAPSTQSQEQ 161
           PI++K KPK + P    + A  +G  DG  D P  Q+ EQ
Sbjct: 781 PIISKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQ 820


>AB023420-1|BAA75062.1|  840|Homo sapiens apg-2 protein.
          Length = 840

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 45  PILNKVKPKEKTPPPSNQTA-GDGQADGNKDAPSTQSQEQ 161
           PI++K KPK + P    + A  +G  DG  D P  Q+ EQ
Sbjct: 781 PIISKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQ 820


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,931,239
Number of Sequences: 237096
Number of extensions: 1356538
Number of successful extensions: 3420
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3370
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)