Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0502
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_54032| Best HMM Match : Peptidase_A17 (HMM E-Value=5.20022e-42) 42 5e-04
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 40 0.001
SB_21302| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-27) 39 0.003
SB_54145| Best HMM Match : zf-CCHC (HMM E-Value=0.021) 39 0.003
SB_43219| Best HMM Match : zf-CCHC (HMM E-Value=0.0056) 39 0.003
SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11) 39 0.003
SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19) 38 0.006
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 38 0.006
SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024) 37 0.010
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 36 0.032
SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 36 0.032
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 36 0.032
SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.042
SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034) 35 0.055
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 35 0.055
SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18) 33 0.17
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 32 0.29
SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038) 31 0.90
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 31 0.90
SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035) 29 2.1
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_11171| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-14) 29 2.1
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05) 29 2.7
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 29 3.6
SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3) 29 3.6
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.8
SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 28 4.8
SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 28 4.8
SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046) 28 4.8
SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 4.8
SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_20520| Best HMM Match : Peptidase_A17 (HMM E-Value=6.16571e-44) 28 4.8
SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 28 4.8
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 28 4.8
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 4.8
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 28 6.3
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.3
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_40529| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_38788| Best HMM Match : rve (HMM E-Value=4e-06) 28 6.3
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 6.3
SB_23509| Best HMM Match : XET_C (HMM E-Value=3.6) 28 6.3
SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_34532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_29912| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00036) 28 6.3
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 28 6.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_48544| Best HMM Match : TSP_1 (HMM E-Value=3.1e-32) 27 8.4
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 27 8.4
>SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C+NC H S C ++ RC +C G H T +C RD+ P
Sbjct: 416 CYNCLSSSHISSKCTSKFRCRQCRGKHHTTICERDKGQGPHP 457
>SB_54032| Best HMM Match : Peptidase_A17 (HMM E-Value=5.20022e-42)
Length = 832
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C+NC H S C ++ RC +C G H T +C RD+ P
Sbjct: 103 CYNCLSSSHISSKCTSKFRCRQCGGKHHTTICERDKGQGPHP 144
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQGHPANTAD 263
C+NC GH + C A C KC H T++C R Q + PPS T +P N+ D
Sbjct: 305 CYNCTKGGHMATKCKAG-NCAKCNSRHHTSICDRVQSSL--PPS-----TPANPGNSRD 355
>SB_21302| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-27)
Length = 1290
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C NC H + C ++ C KC H T++C D K+ + P
Sbjct: 328 CFNCTKRKHRAEECKSKSNCFKCKQRHHTSICDSDVKSNSNP 369
>SB_54145| Best HMM Match : zf-CCHC (HMM E-Value=0.021)
Length = 286
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C NC H + C ++ C KC H T++C D K+ + P
Sbjct: 23 CFNCTKGKHHAEECKSKSNCFKCKRRHHTSICDSDVKSNSNP 64
>SB_43219| Best HMM Match : zf-CCHC (HMM E-Value=0.0056)
Length = 693
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C NC H + C ++ C KC H T++C D K+ + P
Sbjct: 263 CFNCTKGKHRAEECKSKSNCFKCKQRHHTSICDSDVKSNSNP 304
>SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11)
Length = 1461
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C NC H + C ++ C KC H T++C D K+ + P
Sbjct: 286 CFNCTKGKHRAEECKSKSNCFKCKQRHDTSICDSDVKSNSNP 327
>SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19)
Length = 879
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C+NC H S C ++ RC +C G T +C RD+ P
Sbjct: 215 CYNCLSSSHISSKCTSKFRCRQCGGKRHTTICERDKGQGPPP 256
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPS 218
C+NC GH + C A C KC H T++C R Q + PPS
Sbjct: 199 CYNCTKGGHMATKCKAG-NCAKCNSRHHTSICDRVQSSL--PPS 239
>SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1322
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRD--QKTATEPPS 218
+C NC GH+ C+ RC+ C G H CT + ++ EPPS
Sbjct: 527 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCTFNCQREEEGEPPS 573
>SB_30386| Best HMM Match : zf-CCHC (HMM E-Value=0.0024)
Length = 90
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRD--QKTATEPPS 218
+C NC GH+ C+ RC+ C G H CT + ++ EPPS
Sbjct: 19 RCFNCSESGHTRAACYMDQRCMLCGGSHEVDDCTFNCQREEEGEPPS 65
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 39 SGIAVETPHKKGTPSQ-CHNCQLYGHSSRNCHARPRCVKC 155
S IA + P KK +P + C+ C GH +R+C +C KC
Sbjct: 106 SHIARDCPEKKESPGESCYRCGKSGHFARDCTDDTKCYKC 145
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 CSLSGIAVETPHKKGTPSQCHNCQLYGHSSRNC--HARPRCVKCLGDHATALCTRDQKTA 203
C++SG + + C+ CQ GH +R+C + C C GD + +K
Sbjct: 59 CNMSGHFARDCDAESSRDVCYRCQETGHFARDCPNEKKEGCYTC-GDESHIARDCPEKKE 117
Query: 204 TEPPSCVLCRTQGH 245
+ SC C GH
Sbjct: 118 SPGESCYRCGKSGH 131
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQGHPANTADA 266
C+ C + GH +R+C A C T RD + C C + H A D
Sbjct: 56 CYRCNMSGHFARDCDAESSRDVCYRCQETGHFARDCPN-EKKEGCYTCGDESHIAR--DC 112
Query: 267 PEPRK 281
PE ++
Sbjct: 113 PEKKE 117
Score = 31.1 bits (67), Expect = 0.68
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCH------ARPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQGHP 248
C++C GH SR+C +R R V C + + RD + C C+ GH
Sbjct: 28 CYSCGKKGHISRDCKNPSSGGSRNRDVVCYRCNMSGHFARDCDAESSRDVCYRCQETGHF 87
Query: 249 ANTADAPEPRK 281
A D P +K
Sbjct: 88 AR--DCPNEKK 96
>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEP 212
C NC + + C ++ C KC H T++C D K+ + P
Sbjct: 246 CFNCTKGKYRAEECKSKSNCFKCKQRHHTSICDSDVKSNSNP 287
>SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 468
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTA 203
C NC GH C+ R C KC H T+LC Q A
Sbjct: 112 CFNCGRTGHRENKCNGRG-CYKCKARHHTSLCHDKQHNA 149
>SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 289
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTA 203
C NC GH C+ R C KC H T+LC Q A
Sbjct: 175 CFNCGRTGHRENKCNGRG-CYKCKARHHTSLCHDKQHNA 212
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTA 203
C NC GH C+ R C KC H T+LC Q A
Sbjct: 337 CFNCGRTGHRENKCNGRG-CYKCKARHHTSLCHDKQHNA 374
>SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 449
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTA 203
C NC GH C+ R C KC H T+LC Q A
Sbjct: 112 CFNCGRTGHRENKCNGRG-CYKCKARHHTSLCHDKQHNA 149
>SB_39530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 35.1 bits (77), Expect = 0.042
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATAL 179
C C +GH +RNC + C+ C H T L
Sbjct: 344 CWGCLTWGHDNRNCKIKKTCISCRELHPTCL 374
>SB_46068| Best HMM Match : zf-CCHC (HMM E-Value=0.0034)
Length = 193
Score = 34.7 bits (76), Expect = 0.055
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 87 CHNCQLY--GHSSRNCHARPRCVKCLGDHATAL 179
C NC L GH S +C P C KC G H T L
Sbjct: 101 CFNCGLEKPGHGSSSCPDLPACTKCPGRHLTLL 133
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 72 GTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALC 182
G P++C C GH C R RC +C H A C
Sbjct: 147 GQPAECGYCHQVGHPISTCPVRGRCFRCGAAGHVVARC 184
>SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18)
Length = 368
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 6 QIFNIRTVCSLSGIAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRC 146
+I N + SG AV PHK T ++C Q + + C+ +PRC
Sbjct: 28 EILNANYGRTQSGSAV-CPHKNATNTRCVGKQAFAKIPKKCNGKPRC 73
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 51 VETPHKKGTPSQCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCV 224
++ P K+ + +CH C GH + +C +C KC +C + ++T+ + S
Sbjct: 145 LDNPSKQNSFVRCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSAS 204
Query: 225 LCRTQG 242
+++G
Sbjct: 205 GPKSKG 210
>SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038)
Length = 447
Score = 30.7 bits (66), Expect = 0.90
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHARPRCVKCLGDHATALC 182
+C C GH S C + C C G H ++C
Sbjct: 81 RCFICLKKGHRSNECFNKDGCSDCRGRHHVSIC 113
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.7 bits (66), Expect = 0.90
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 186 RDQKTATEPPSCVLCRTQGHPAN--TADAPEPRK*IAASPAKTASELPAQTSKPRHP 350
R T+ E C+ G P T D P P + P+ T + LPA TS+P+ P
Sbjct: 1629 RINPTSWESSICLRAEIYGCPVTPPTTDPPRPPVTVTPKPS-TDAPLPASTSRPQPP 1684
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 30.7 bits (66), Expect = 0.90
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHARPRCVKCLGDHATALC 182
+C C GH S C + C C G H ++C
Sbjct: 357 RCFICLKKGHRSNECFNKDGCSDCRGRHHVSIC 389
>SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1577
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 81 SQCHNCQLYGHSSRNCHARP-RCVKCLGDHATALCTRDQKTATEPP 215
++C C H S C ++ C C G H ++C TE P
Sbjct: 356 ARCFRCLRKNHRSYECKSKDSNCKGCAGAHHLSICENQASGQTETP 401
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 128 SRAPPMRQVLRRSRHGPMHSRSKNRDRT 211
S+ P+R +L+RS PM+ R N D+T
Sbjct: 289 SQITPIRNILKRSDSAPMYPRKGNSDKT 316
>SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035)
Length = 671
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCV--KCLGDHATALCTRDQKTATEPPSCVLCRTQGHPANTA 260
C NC L H SR C C+ C H + L + + P + ++ G A A
Sbjct: 151 CDNCLLPNHISRRCKTYKACLVSGCSEKHHSLLHPPPGQASQLP---LQEQSSGSRAEEA 207
Query: 261 DAPEPRK*IAASPAKTASELP 323
P P +A P+ +S LP
Sbjct: 208 SPPPPPALVATGPS-ASSRLP 227
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +3
Query: 30 CSLSGIAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATE 209
CSL A +TP K S+CH G C C +C +++ + T
Sbjct: 1950 CSLCSKAFDTPRKLEIHSRCHT----GFKPHKCEF---CGRCFPYYSSYYYHKMTHTKDR 2002
Query: 210 PPSCVLC 230
P C LC
Sbjct: 2003 PHKCPLC 2009
>SB_11171| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-14)
Length = 199
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +3
Query: 30 CSLSGIAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATE 209
CSL A +TP K S+CH G C C +C +++ + T
Sbjct: 23 CSLCSKAFDTPRKLEIHSRCHT----GFKPHKCEF---CGRCFPYYSSYYYHKMTHTKDR 75
Query: 210 PPSCVLC 230
P C LC
Sbjct: 76 PHKCPLC 82
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 66 KKGTPSQCHNCQLYGHSSRN--CHARPR-CVKC 155
+KG C+ C + GH S++ C AR R C KC
Sbjct: 1521 EKGKGKHCYRCGMEGHFSKDPECKARGRMCNKC 1553
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 48 AVETPHKKGTPSQCHNCQLYGHSSRNC 128
A E P +G CH C GH SR C
Sbjct: 392 ARECPTGRGQSDTCHKCGETGHYSREC 418
>SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05)
Length = 437
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +3
Query: 66 KKGTPSQCHNCQLYGHSSR--NCHARPR-CVKC--LGDHATALCTRDQKT 200
+KG C+ C + GH S+ C AR R C KC +G A +++ K+
Sbjct: 180 EKGKGKHCNRCGMEGHFSKEPECKARGRMCNKCGKIGHFARVFKSKELKS 229
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 13 STSERSVAFPESQSKPHTRKAHLASAITANYTGILPVTVTRAPDASSA*AITPRPYA 183
+T+ + PE+ + P T A LA+ T L VT AP+A++A T P A
Sbjct: 524 TTASLATTAPETTTAPETTTASLATTAPETTTASL---VTTAPEATTASLATTAPEA 577
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 221 RPVSNTGSPRKYRGCPRAPKINRRVARQNRLRASGPDIKASAPS 352
+PVS + +Y R P+I R AR R +G ++ PS
Sbjct: 762 KPVSVGEAVERYLETGREPQIRSRSARSRRTSETGDEVNVEEPS 805
>SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3)
Length = 529
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 128 SRAPPMRQVLRRSRHGPMHSRSKNRDRTA*LRPVSNTGSPRKYRGCPRAPK 280
S APP R RRSR P SR+ +R RT + T S +RG R +
Sbjct: 423 SIAPPSRTSTRRSRSTP-RSRAGSRIRTP-STSTTTTSSRASFRGSARGTR 471
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 158 RRSRHGPMHSR-SKNRDRTA*LRPVSNTGSPRKYRGCPRAPKINRRVARQNRLRASGP 328
RR H P H R S++R R+ R + SPR+ R R+P + R + ++R R+ P
Sbjct: 210 RRRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRR-SRSPSPHHR-SHRSRSRSRSP 265
>SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1362
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 81 SQCHNCQLYGHSSRNCHARP-RCVKCLGDHATALCTRDQKTATEPP 215
++C C + S C ++ C C G H ++C TE P
Sbjct: 369 ARCFRCLRKNYRSYECRSKDSNCKGCAGAHHLSICENQASGQTETP 414
>SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 205 RCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 259
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 125 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 179
>SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = +3
Query: 57 TPHKKGTP-----SQCHNCQLYGHSSRNCHARP-RCVKCLGD 164
TPHKKG S+C C GH C P + V +GD
Sbjct: 174 TPHKKGQKCPAIDSECFACHKTGHYQHMCFTPPKKFVHSIGD 215
>SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 508
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 134 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 188
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 197 RCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 251
>SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 382
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 231 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 285
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 205 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 259
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 262 RCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 316
>SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 403
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 125 RCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 179
>SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046)
Length = 338
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 88 RCHRCNRQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 142
>SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 438
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 185 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 239
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 55 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 109
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 129 HARPRCVKCLGDHATALCTRDQKTA 203
HA+ C KC D+ + LC R Q A
Sbjct: 1934 HAKEECKKCANDYWSNLCARIQAAA 1958
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 69 KGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQ 194
KGTP+ C CQ G SS N + V + LC + Q
Sbjct: 371 KGTPNDCKRCQCPGGSSGNKFSESCYVDTSTTPPSVLCDKCQ 412
>SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 205 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 259
>SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 297
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 205 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 259
>SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 295
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 203 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 257
>SB_20520| Best HMM Match : Peptidase_A17 (HMM E-Value=6.16571e-44)
Length = 655
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 96 CQLYGHSSRNCHARP-RCVKCLGDHATALCTRDQKTATEPP 215
C H S +C ++ +C C G H ++C R++ T P
Sbjct: 2 CLRKNHRSFDCRSKDNKCKGCGGAHHVSICERNEAKQTSGP 42
>SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 205 RCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 259
>SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 205 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 259
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 85 RCHRCNKQGHKAADCRCSKNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 139
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 163 RCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 217
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C +C KC +C + ++T+ + S +++G
Sbjct: 205 RCHRCNKQGHKAADCRCSQNHQCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 259
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 83 ARCAFLVWGFDCDSG 39
AR F VWG+D DSG
Sbjct: 106 ARVGFAVWGYDADSG 120
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHA--RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQG 242
+CH C GH + +C C KC +C + ++T+ + S +++G
Sbjct: 1022 RCHRCNKQGHKAADCRCSQNHHCEKCGKIGHFKVCCKSKQTSGKAKSASGPKSKG 1076
>SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2639
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 186 RDQKTATEPPSCVLCRTQGHPANTADAPEPR 278
R+++T T P C C T+GH A + A + R
Sbjct: 123 RNRRTYTGIPICSQCNTRGHTAYSCRARDSR 153
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 114 SSRNCHA-RPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQGHP 248
+++ C A R C+ CLGDH ++ T + + +C P
Sbjct: 921 TAKQCEAIRQICLSCLGDHVARRIPAEELTDPKHKNAYICTAVEEP 966
>SB_40529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 186 RDQKTATEPPSCVLCRTQGHPANTADAPEPR 278
R+++T T P C C T+GH A + A + R
Sbjct: 424 RNRRTYTGIPICSQCNTRGHTAYSCRARDSR 454
>SB_38788| Best HMM Match : rve (HMM E-Value=4e-06)
Length = 956
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNCHARPRCVKCLGDH 167
QCHNCQ GH + C + + V + DH
Sbjct: 201 QCHNCQKIGHFATVCQSAKQ-VHEVDDH 227
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.9 bits (59), Expect = 6.3
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Frame = +2
Query: 41 RNRSRNPTQERHT*PVP*LPIIRAFFP*LSRAPPMRQVLRRSR-HGP--MHSRSKN---- 199
R+RSR+P + R R+ P SR+P + R SR H HSRS++
Sbjct: 233 RSRSRSPKKSRSARRSRSPQKSRS--PQRSRSPRSSKRYRSSRSHRKHRSHSRSRSPRSK 290
Query: 200 RDRTA*LRPVSNTGSPRKYR---GCPRAPKINRRVARQNRLRA 319
R R+ R S + SPR+YR C R +R + ++RLR+
Sbjct: 291 RSRSPRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRS 333
>SB_23509| Best HMM Match : XET_C (HMM E-Value=3.6)
Length = 362
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCT--RDQKTATEPPS 218
C+ S +C + +C KC GDH CT ++T+ P+
Sbjct: 305 CYRFSRGNPCSGDCGYKHKCHKCDGDHRPGACTFRAPKRTSNHSPA 350
>SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 27.9 bits (59), Expect = 6.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNC 128
+CH+C +GH+ R+C
Sbjct: 84 RCHHCHKFGHTKRDC 98
>SB_34532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 126 CHARPRCVKCLGDHATALCTRDQKTA--TEPPSCVLCRTQGHPANTADAPEP 275
C P C GD + A+C D A PS +C +G+P+ T +P
Sbjct: 65 CKGDPSVTMCEGDPSVAMCEGDPSVAMCEGNPSVTMC--EGNPSVTMCEGDP 114
>SB_29912| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00036)
Length = 618
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 72 GTPSQCHNCQLYGHSSRNCHARPRCVKC 155
G P+Q C H +C R RC KC
Sbjct: 75 GQPTQFAYCHQMAHLISSCPVRGRCFKC 102
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +3
Query: 66 KKGTPSQCHNCQLYGHSSRNCHARPR-CVKCL-GDHATALCTRDQKTATEPP-SCVLCRT 236
K TP+ CH+ Q +R C PR C CL H C QK P L
Sbjct: 870 KNVTPNSCHHSQREADHAREC---PRCCFSCLKRGHPQTECRSIQKYEKGPYFHHPLLHD 926
Query: 237 QGHPAN-TADAPEP 275
Q PA+ A AP P
Sbjct: 927 QSLPASANAVAPVP 940
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/105 (24%), Positives = 46/105 (43%)
Frame = +2
Query: 44 NRSRNPTQERHT*PVP*LPIIRAFFP*LSRAPPMRQVLRRSRHGPMHSRSKNRDRTA*LR 223
+RSR+ + +R P R+ F R+PP R S+ S ++ + A R
Sbjct: 631 SRSRSRSPDRRKRSYSPPPRRRSPFRERRRSPPRRTSRWSSQSPDRRSPARIKSSPARSR 690
Query: 224 PVSNTGSPRKYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVS 358
S + SPR + ++P +++ + + S P IK + S S
Sbjct: 691 SRSQSASPRHSKS--KSPALSKVQVKTEKKTPSPPPIKKTIGSAS 733
>SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1958
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 186 RDQKTATEPPSCVLCRTQGHPA-NTADAPEPRK*IAASPAKTASELPAQTSKP 341
RDQ+ + + P+C C +GH A + P+ RK AS + L S P
Sbjct: 102 RDQEPSGDRPTCYNCGERGHVAIGCRNPPQFRKRTEASSMGQSEVLNNSDSPP 154
>SB_48544| Best HMM Match : TSP_1 (HMM E-Value=3.1e-32)
Length = 326
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -3
Query: 127 QLREECPYNWQLW-HWLGVPFLCGVST 50
QL+E CP NW W W C + T
Sbjct: 191 QLQEHCPGNWGEWSSWSSCSVTCDLGT 217
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MRQVLRRSRHGPMHSRSKNRDRTA*LRPVSNTGSPRKYRGCPR-APKINRRVARQNRLRA 319
+RQ L RS SRS + ++ P + SPRK PR + R+ +R R R+
Sbjct: 170 LRQELPRSGTSKSRSRSPSGRKSRSRSPRKRSRSPRKMLRSPRKRSRTPRKRSRSPRKRS 229
Query: 320 SGP 328
P
Sbjct: 230 RSP 232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,654,105
Number of Sequences: 59808
Number of extensions: 310306
Number of successful extensions: 1384
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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