Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0502
(579 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 61 1e-09
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 60 2e-09
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 59 4e-09
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 59 4e-09
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 58 6e-09
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 57 2e-08
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 57 2e-08
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 57 2e-08
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 55 6e-08
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 55 6e-08
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 55 8e-08
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 54 1e-07
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 54 1e-07
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 53 3e-07
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 52 7e-07
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 48 7e-06
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 46 4e-05
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 46 4e-05
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 37 0.017
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 37 0.017
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 37 0.017
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 34 0.16
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 32 0.65
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 31 0.85
BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p pro... 29 3.4
BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p pro... 29 4.5
AY051547-1|AAK92971.1| 316|Drosophila melanogaster GH19567p pro... 29 6.0
AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5... 29 6.0
AE014296-2997|AAF49280.1| 316|Drosophila melanogaster CG13698-P... 29 6.0
AY052096-1|AAK93520.1| 574|Drosophila melanogaster SD04526p pro... 28 7.9
AE014296-3703|AAN12199.1| 574|Drosophila melanogaster CG32452-P... 28 7.9
AE014296-3702|AAN12198.1| 574|Drosophila melanogaster CG32452-P... 28 7.9
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +3
Query: 3 KQIFNIRTVCSLSGIAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALC 182
K+I ++ +C + + +E K+ QCH CQ GH+++ C CVKC G+H C
Sbjct: 260 KEILAVKALCHMR-VVIEPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDC 318
Query: 183 TRDQKTATEPPSCVLCRTQGHPAN 254
TR + E +C C Q HPAN
Sbjct: 319 TRPR---IELCTCYNCGGQ-HPAN 338
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCV 224
+ +E ++ P QC+ CQ + H+ +C PRC+KC GDH ++ CT+ + T P +CV
Sbjct: 642 VDIERKNRTREPVQCYRCQGFRHAKNSCMKPPRCMKCAGDHLSSCCTKPRST---PATCV 698
Query: 225 LC 230
C
Sbjct: 699 NC 700
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 59.3 bits (137), Expect = 4e-09
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCV 224
+ +E ++ P QC+ CQ + H+ +C PRC+KC G+H ++ CT K T P +CV
Sbjct: 634 VDIERKNRTRDPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCV 690
Query: 225 LCRTQ 239
C Q
Sbjct: 691 NCSGQ 695
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 59.3 bits (137), Expect = 4e-09
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCV 224
+ +E ++ P QC+ CQ + H+ +C PRC+KC G+H ++ CT K T P +CV
Sbjct: 612 VDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCV 668
Query: 225 LCRTQ 239
C Q
Sbjct: 669 NCSGQ 673
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 58.4 bits (135), Expect = 6e-09
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCV 224
+ +E ++ P QC+ CQ + HS +C PRC+KC G H ++ CT K T P +CV
Sbjct: 649 VDIERKNRTREPVQCYRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCT---KPRTTPATCV 705
Query: 225 LC 230
C
Sbjct: 706 NC 707
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALC--TRDQKTATEPPS 218
I VE PHK+ P QC NCQ YGH+ C + CV C H TA C +D K+ + +
Sbjct: 370 ITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSN 429
Query: 219 C 221
C
Sbjct: 430 C 430
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALC--TRDQKTATEPPS 218
I VE PHK+ P QC NCQ YGH+ C + CV C H TA C +D K+ + +
Sbjct: 214 ITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSN 273
Query: 219 C 221
C
Sbjct: 274 C 274
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCV 224
I VE PHK+ P QC NCQ YGH+ C P CV C H + C +++ A E C
Sbjct: 26 ITVEEPHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACE-KKCN 84
Query: 225 LCRTQGHPANTADAP 269
C H AN P
Sbjct: 85 NC-GGNHTANYRGCP 98
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCV 224
+ +E ++ P QC+ CQ + H+ +C PRC+K G+H ++ CT K T P +CV
Sbjct: 227 VDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCV 283
Query: 225 LCRTQ 239
C Q
Sbjct: 284 NCSGQ 288
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCV 224
+ +E ++ P QC+ CQ + H+ +C PRC+K G+H ++ CT K T P +CV
Sbjct: 227 VDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCV 283
Query: 225 LCRTQ 239
C Q
Sbjct: 284 NCSGQ 288
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 54.8 bits (126), Expect = 8e-08
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +3
Query: 33 SLSGIAVETPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTAT 206
SL G V+ K+ + P+QCH CQ +GH+ C +C+KC HAT CT+ +
Sbjct: 698 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-- 755
Query: 207 EPPSCVLCRTQGHPANTADAP---EPRK*IAASPAKTASELPA--QTSKPRHP 350
P +C C H ++ P E ++ ++ + ++ P QT + +HP
Sbjct: 756 -PATCANC-NGSHVSSYKGCPAFQEAKQRLSINKTQSLHSQPTHLQTPRNKHP 806
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +3
Query: 33 SLSGIAVETPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTAT 206
SL G V+ K+ + P+QCH CQ +GH+ C +C+KC HAT CT+ +
Sbjct: 775 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-- 832
Query: 207 EPPSCVLCRTQGHPANTADAP---EPRK*IAASPAKTASELPA--QTSKPRHP 350
P +C C H ++ P E ++ ++ + ++ P QT + +HP
Sbjct: 833 -PATCANC-NGSHVSSYKGCPAFQEAKQRLSINKIQSLHSQPTHLQTPRNKHP 883
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +3
Query: 33 SLSGIAVETPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTAT 206
SL G V+ K+ + P+QCH CQ +GH+ C +C+KC HAT CT+ +
Sbjct: 698 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL-- 755
Query: 207 EPPSCVLCRTQGHPANTADAP---EPRK*IAASPAKTASELPA--QTSKPRHP 350
P +C C H ++ P E ++ ++ + ++ P QT + +HP
Sbjct: 756 -PATCANC-NGSHVSSYKGCPAFQEAKQRLSINKIQSLHSQPTHLQTPRNKHP 806
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +3
Query: 33 SLSGIAVETPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTAT 206
SL G V+ K+ + P+QCH CQ +GH+ C +C+KC HA+ CT+ +
Sbjct: 775 SLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNL-- 832
Query: 207 EPPSCVLCRTQGHPANTADAP---EPRK*IAASPAKTASELPA--QTSKPRHP 350
P +C C H ++ P E ++ ++ + ++ P QT + +HP
Sbjct: 833 -PATCANC-NGSHVSSYKGCPVFQEAKQRLSINKIQSLHSQPTHLQTPRNKHP 883
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +3
Query: 78 PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQGHPANT 257
P+QCH CQ +GH+ C +C+KC HAT CT+ + P +C C H ++
Sbjct: 2 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSY 57
Query: 258 ADAP---EPRK*IAASPAKTASELPA--QTSKPRHP 350
P E ++ ++ + ++ P QT + +HP
Sbjct: 58 KGCPAFQEAKQRLSINKIQSLHSQPTHLQTPRNKHP 93
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 12 FNIRTVCSLSGIAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCTR 188
F + + ++S V+ P +C +CQL GH+S++C P CV C L H CTR
Sbjct: 179 FTLPSKLTVSWHTVKVSEYIPNPMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTR 238
Query: 189 DQKTATEPPSCVLCRTQGHPANTADAPE 272
C C Q HPA++ + P+
Sbjct: 239 --------IFCANCTGQ-HPASSPECPQ 257
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT--ALCTRD 191
+ VE ++ QC CQ++GHS C P C KC G H T ALC D
Sbjct: 357 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISD 407
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 45 IAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT--ALCTRD 191
+ VE ++ QC CQ++GHS C P C KC G H T ALC D
Sbjct: 391 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISD 441
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCTRDQKTATEPPSCVLCRTQGH 245
+C+ C +GH +R C RC +C G H + CT+ + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ-----ADNPTCYRCNKTGH 106
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCTRDQKTATEPPSCVLCRTQGH 245
+C+ C +GH +R C RC +C G H + CT+ + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ-----ADNPTCYRCNKTGH 106
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 84 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCTRDQKTATEPPSCVLCRTQGH 245
+C+ C +GH +R C RC +C G H + CT+ + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ-----ADNPTCYRCNKTGH 106
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGDHATAL-----CTRDQKTATEPPSCVLCRTQGHPA 251
C NC GH R+C + C C G H T L + + ++T PP+ L R A
Sbjct: 464 CLNCFARGHQLRDCTSMHSCFTCKGRHHTLLHRSPPNSENASSSTSPPTQQLPRPSSRNA 523
Query: 252 NTA 260
+ +
Sbjct: 524 SAS 526
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 87 CHNCQLYGHSSRNCHARPRCVKCLGD 164
C C +GH ++ C A PRC+ C D
Sbjct: 431 CLRCGEHGHKAKGCVAPPRCLICSSD 456
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 78 PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCR 233
P +C C +GH + C + C+ C + T D + T +C+ CR
Sbjct: 185 PLRCKKCLRFGHPTPICKSVETCINC----SETKHTNDGEKCTNEKNCLNCR 232
>BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p
protein.
Length = 742
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/67 (26%), Positives = 24/67 (35%)
Frame = +3
Query: 216 SCVLCRTQGHPANTADAPEPRK*IAASPAKTASELPAQTSKPRHPXXXXXXXXXXXXXXP 395
+C L ++ N +PE K A P + A E P +T K R P
Sbjct: 271 ACALAKSHKKSKNRPASPERTKAGKADPVEDACETPRKTKKRRPKVKRPYKSRYYSMYRP 330
Query: 396 VSRPGRN 416
RP N
Sbjct: 331 TERPKAN 337
>BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p
protein.
Length = 998
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/67 (26%), Positives = 24/67 (35%)
Frame = +3
Query: 216 SCVLCRTQGHPANTADAPEPRK*IAASPAKTASELPAQTSKPRHPXXXXXXXXXXXXXXP 395
+C L ++ N +PE K A P + A E P +T K R P
Sbjct: 527 ACALAKSHKKNKNRPASPERTKAGKADPVEDACETPRKTKKRRPKVKRPYKSRYYSMYRP 586
Query: 396 VSRPGRN 416
RP N
Sbjct: 587 TERPKAN 593
>AY051547-1|AAK92971.1| 316|Drosophila melanogaster GH19567p
protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 7 KYSTSERSVAFPESQSKPHTRKAHLASAITANYTGILPVTVTRAPDASSA*AITPRPYAL 186
K S V+ ++ KP++ + A TA + TVT + S+ ++T P
Sbjct: 212 KEPRSRNGVSVTDASGKPYSGIRNGAG--TAGSVASMSTTVTSVSNGSTLDSVTRSPLRS 269
Query: 187 AIKKPR 204
++KKPR
Sbjct: 270 SLKKPR 275
>AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5C
protein.
Length = 1081
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 75 TPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALC 182
TPS+ CQ G S R CH R + G++ C
Sbjct: 101 TPSEIAMCQAKGQSERWCHNYVRVLHSYGENQLYAC 136
>AE014296-2997|AAF49280.1| 316|Drosophila melanogaster CG13698-PB
protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 7 KYSTSERSVAFPESQSKPHTRKAHLASAITANYTGILPVTVTRAPDASSA*AITPRPYAL 186
K S V+ ++ KP++ + A TA + TVT + S+ ++T P
Sbjct: 212 KEPRSRNGVSVTDASGKPYSGIRNGAG--TAGSVASMSTTVTSVSNGSTLDSVTRSPLRS 269
Query: 187 AIKKPR 204
++KKPR
Sbjct: 270 SLKKPR 275
>AY052096-1|AAK93520.1| 574|Drosophila melanogaster SD04526p
protein.
Length = 574
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 128 SRAPPMRQVLRRSRHGPMHSRSKNRDRTA*LRPVSNTGSPRKYRGCPRAPKINRRVARQN 307
SR P R+++ RSR SRS+ R R S R +R R+P + RR+ +N
Sbjct: 270 SRLPSRRKLISRSRSPDHRSRSRYRSLGKGSRHASPCAGNR-HRSL-RSPSVERRLGSRN 327
>AE014296-3703|AAN12199.1| 574|Drosophila melanogaster CG32452-PB,
isoform B protein.
Length = 574
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 128 SRAPPMRQVLRRSRHGPMHSRSKNRDRTA*LRPVSNTGSPRKYRGCPRAPKINRRVARQN 307
SR P R+++ RSR SRS+ R R S R +R R+P + RR+ +N
Sbjct: 270 SRLPSRRKLISRSRSPDHRSRSRYRSLGKGSRHASPCAGNR-HRSL-RSPSVERRLGSRN 327
>AE014296-3702|AAN12198.1| 574|Drosophila melanogaster CG32452-PA,
isoform A protein.
Length = 574
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 128 SRAPPMRQVLRRSRHGPMHSRSKNRDRTA*LRPVSNTGSPRKYRGCPRAPKINRRVARQN 307
SR P R+++ RSR SRS+ R R S R +R R+P + RR+ +N
Sbjct: 270 SRLPSRRKLISRSRSPDHRSRSRYRSLGKGSRHASPCAGNR-HRSL-RSPSVERRLGSRN 327
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,662,583
Number of Sequences: 53049
Number of extensions: 474020
Number of successful extensions: 1729
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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