Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0501
         (551 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ298450-1|ABC55264.1|  438|Homo sapiens type I cytokine recepto...    29   8.2  
BC023567-1|AAH23567.2|  442|Homo sapiens cytokine receptor-like ...    29   8.2  
AK057734-1|BAB71554.1|  433|Homo sapiens protein ( Homo sapiens ...    29   8.2  
AF120151-1|AAD31758.1|  438|Homo sapiens cytokine receptor-like ...    29   8.2  
AF046059-1|AAD02422.1|  442|Homo sapiens cytokine receptor relat...    29   8.2  

>DQ298450-1|ABC55264.1|  438|Homo sapiens type I cytokine receptor
           like factor protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 310 YFGCDFFFTVWKTLV 354
           YFGC FF+  WK LV
Sbjct: 423 YFGCSFFYPGWKVLV 437


>BC023567-1|AAH23567.2|  442|Homo sapiens cytokine receptor-like
           factor 3 protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 310 YFGCDFFFTVWKTLV 354
           YFGC FF+  WK LV
Sbjct: 427 YFGCSFFYPGWKVLV 441


>AK057734-1|BAB71554.1|  433|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25005 fis, clone CBL00905. ).
          Length = 433

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = -2

Query: 313 NKPGKHLYFAYVI----PQPVECIKHLIIHRQHLSTVLS*LA*VRRSFKHDTRGSAMSFE 146
           N PG  L FA+        P+ C    ++HR  LS  LS L  VRR F+ D      + E
Sbjct: 122 NCPGHCLMFAHRPRSWREMPIRCADFGVLHRNELSGTLSGLTGVRR-FQQDDAHIFCTVE 180

Query: 145 Q-HYSLKSSMNNIQCSLSSY 89
           Q    +K  +  +Q   S++
Sbjct: 181 QIEEEIKGCLQFLQSVYSTF 200


>AF120151-1|AAD31758.1|  438|Homo sapiens cytokine receptor-like
           molecule 9 protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 310 YFGCDFFFTVWKTLV 354
           YFGC FF+  WK LV
Sbjct: 423 YFGCSFFYPGWKVLV 437


>AF046059-1|AAD02422.1|  442|Homo sapiens cytokine receptor related
           protein 4 protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 310 YFGCDFFFTVWKTLV 354
           YFGC FF+  WK LV
Sbjct: 427 YFGCSFFYPGWKVLV 441


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,557,486
Number of Sequences: 237096
Number of extensions: 1127836
Number of successful extensions: 1499
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)