Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0501
         (551 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro...    29   5.5  
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA...    29   5.5  
BT023165-1|AAY55581.1|  580|Drosophila melanogaster IP03406p pro...    28   7.3  
AE014297-3741|AAF56421.2|  807|Drosophila melanogaster CG13664-P...    28   7.3  

>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p protein.
          Length = 1486

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 163  SAMSFEQHYSLKSSMNNIQCSLSSYVSVTN 74
            S +S   + S+   MNNI CS++S  S T+
Sbjct: 1172 SKLSHNNNNSISKHMNNIDCSITSTTSTTS 1201


>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
            protein.
          Length = 1486

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 163  SAMSFEQHYSLKSSMNNIQCSLSSYVSVTN 74
            S +S   + S+   MNNI CS++S  S T+
Sbjct: 1172 SKLSHNNNNSISKHMNNIDCSITSTTSTTS 1201


>BT023165-1|AAY55581.1|  580|Drosophila melanogaster IP03406p
           protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -2

Query: 313 NKPGKHLYFAYVIPQPV 263
           NKPGKHL   YVIP PV
Sbjct: 180 NKPGKHL--KYVIPDPV 194


>AE014297-3741|AAF56421.2|  807|Drosophila melanogaster CG13664-PA
           protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -2

Query: 313 NKPGKHLYFAYVIPQPV 263
           NKPGKHL   YVIP PV
Sbjct: 408 NKPGKHL--KYVIPDPV 422


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,040,896
Number of Sequences: 53049
Number of extensions: 354627
Number of successful extensions: 682
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)