Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0500
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   5.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.1  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 303 MTSIYFEXQFNTILNYSVIL 362
           M S+Y+  Q   I+NY++ L
Sbjct: 167 MCSLYYILQITLIVNYALAL 186


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 81  GTILLRKSILHNKVNKSII 137
           G   + KSIL NKV K ++
Sbjct: 559 GLCKVMKSILDNKVEKVVV 577


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 287 LNDFHIYLTDLYDF 246
           LN FH ++TD + F
Sbjct: 239 LNSFHWHITDSHSF 252


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 375 QQFNIVLRYSLI 340
           +Q+N++LRY+ I
Sbjct: 233 EQYNVILRYTKI 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,738
Number of Sequences: 336
Number of extensions: 1784
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)