Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0500
         (451 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023521-1|AAH23521.1|  298|Homo sapiens tRNA-histidine guanylyl...    54   2e-07
AK223119-1|BAD96839.1|  298|Homo sapiens interphase cyctoplasmic...    54   2e-07
AK021663-1|BAB13870.1|  298|Homo sapiens protein ( Homo sapiens ...    54   2e-07
AK000553-1|BAA91249.1|  298|Homo sapiens protein ( Homo sapiens ...    54   2e-07
CR533503-1|CAG38534.1|  298|Homo sapiens FLJ20546 protein.             50   3e-06
BC001852-1|AAH01852.2|  269|Homo sapiens THG1L protein protein.        50   3e-06
BC001523-1|AAH01523.2|  269|Homo sapiens THG1L protein protein.        50   3e-06
AY463216-1|AAS21134.1|  298|Homo sapiens interphase cyctoplasmic...    50   3e-06
AK023355-1|BAB14540.1|  173|Homo sapiens protein ( Homo sapiens ...    50   3e-06
BC101644-1|AAI01645.1|  233|Homo sapiens ES cell expressed Ras p...    29   9.7  
BC101642-1|AAI01643.1|  233|Homo sapiens ES cell expressed Ras p...    29   9.7  
AB093575-1|BAC76997.1|  233|Homo sapiens small GTPase protein E-...    29   9.7  

>BC023521-1|AAH23521.1|  298|Homo sapiens tRNA-histidine
           guanylyltransferase 1-like (S. cerevisiae) protein.
          Length = 298

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 20/35 (57%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNEP ++++GT+L+ + +
Sbjct: 212 LAADKNEILFSEFNINYNNEPPMYRKGTVLIWQKV 246


>AK223119-1|BAD96839.1|  298|Homo sapiens interphase cyctoplasmic
           foci protein 45 variant protein.
          Length = 298

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 20/35 (57%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNEP ++++GT+L+ + +
Sbjct: 212 LAADKNEILFSEFNINYNNEPPMYRKGTVLIWQKV 246


>AK021663-1|BAB13870.1|  298|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11601 fis, clone HEMBA1003893. ).
          Length = 298

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 20/35 (57%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNEP ++++GT+L+ + +
Sbjct: 212 LAADKNEILFSEFNINYNNEPPMYRKGTVLIWQKV 246


>AK000553-1|BAA91249.1|  298|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20546 fis, clone KAT11504. ).
          Length = 298

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 20/35 (57%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNEP ++++GT+L+ + +
Sbjct: 212 LAADKNEILFSEFNINYNNEPPMYRKGTVLIWQKV 246


>CR533503-1|CAG38534.1|  298|Homo sapiens FLJ20546 protein.
          Length = 298

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNE  ++++GT+L+ + +
Sbjct: 212 LAADKNEILFSEFNINYNNELPMYRKGTVLIWQKV 246


>BC001852-1|AAH01852.2|  269|Homo sapiens THG1L protein protein.
          Length = 269

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNE  ++++GT+L+ + +
Sbjct: 183 LAADKNEILFSEFNINYNNELPMYRKGTVLIWQKV 217


>BC001523-1|AAH01523.2|  269|Homo sapiens THG1L protein protein.
          Length = 269

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNE  ++++GT+L+ + +
Sbjct: 183 LAADKNEILFSEFNINYNNELPMYRKGTVLIWQKV 217


>AY463216-1|AAS21134.1|  298|Homo sapiens interphase cyctoplasmic
           foci protein 45 protein.
          Length = 298

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNE  ++++GT+L+ + +
Sbjct: 212 LAADKNEILFSEFNINYNNELPMYRKGTVLIWQKV 246


>AK023355-1|BAB14540.1|  173|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13293 fis, clone OVARC1001188. ).
          Length = 173

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 19/35 (54%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   VSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 107
           ++ADKNEILF EFN+NYNNE  ++++GT+L+ + +
Sbjct: 87  LAADKNEILFSEFNINYNNELPMYRKGTVLIWQKV 121


>BC101644-1|AAI01645.1|  233|Homo sapiens ES cell expressed Ras
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  KSILHNKVNKSIIVDVHDDMLKDKFWKE 182
           KS L  ++N    V+ HD  ++D +WKE
Sbjct: 54  KSALTIQLNHQCFVEDHDPTIQDSYWKE 81


>BC101642-1|AAI01643.1|  233|Homo sapiens ES cell expressed Ras
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  KSILHNKVNKSIIVDVHDDMLKDKFWKE 182
           KS L  ++N    V+ HD  ++D +WKE
Sbjct: 54  KSALTIQLNHQCFVEDHDPTIQDSYWKE 81


>AB093575-1|BAC76997.1|  233|Homo sapiens small GTPase protein E-Ras
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  KSILHNKVNKSIIVDVHDDMLKDKFWKE 182
           KS L  ++N    V+ HD  ++D +WKE
Sbjct: 54  KSALTIQLNHQCFVEDHDPTIQDSYWKE 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,862,283
Number of Sequences: 237096
Number of extensions: 740356
Number of successful extensions: 4927
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4927
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)