Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0499
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 44 1e-04
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 30 1.5
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC006776-7|AAF60623.1| 361|Caenorhabditis elegans Serpentine re... 29 2.6
Z68119-4|CAA92195.1| 271|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical ... 29 3.5
AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical ... 29 3.5
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 28 4.6
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 28 4.6
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 28 4.6
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 6.1
Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 6.1
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 6.1
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 334 IRSCCNGYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIG 507
++ CC+GY + + C P C+ C C P C C P + G +C ++C +G
Sbjct: 102 VKQCCDGYYQT--KDHFCLPDCNPPCKKGKCIEPGKCECDPGY---GGKYCASSCSVG 154
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 334 IRSCCNGYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIG 507
++ CC+GY + + C P C+ C C P C C P + G +C ++C +G
Sbjct: 102 VKQCCDGYYQT--KDHFCLPDCNPPCKKGKCIEPGKCECDPGY---GGKYCASSCSVG 154
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 334 IRSCCNGYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIG 507
++ CC+GY + + C P C+ C C P C C P + G +C ++C +G
Sbjct: 102 VKQCCDGYYQT--KDHFCLPDCNPPCKKGKCIEPGKCECDPGY---GGKYCASSCSVG 154
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 334 IRSCCNGYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIG 507
++ CC+GY + + C P C+ C C P C C P + G +C ++C +G
Sbjct: 102 VKQCCDGYYQT--KDHFCLPDCNPPCKKGKCIEPGKCECDPGY---GGKYCASSCSVG 154
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 382 ICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIGF 510
I + CS N+ C C C D GG CIATCP GF
Sbjct: 1212 ISDEQCSSREANSTCDNG-YCICPTDKPLVHGGKCIATCPEGF 1253
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 382 ICEPHCSKGCVNALCTAPEICTCFPDHVKNAGG--FCIATC 498
IC+P C + +N+ C+A + C P K+ G C TC
Sbjct: 61 ICQPQCPRAEINSDCSATCVRACIPSCSKSTGNTFACSTTC 101
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 31.9 bits (69), Expect = 0.37
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 391 PHCSKGCVNALCTAPEICTCFPDH 462
P C+ +N +CT P C+CF D+
Sbjct: 889 PLCNSCSLNGICTRPGFCSCFEDY 912
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 319 PDLSVIRSCCNGYVRNIYNPNICEPHCSKGCVNALCTAPEICTCF 453
PD + RS CN + C+ CS+ C +A T CT F
Sbjct: 164 PDCANDRSICNAVGLQTFVNTYCQRTCSR-CASATTTRSSTCTSF 207
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 376 PNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCI-ATCP 501
P C P C+ CV L + + C P + + C+ + CP
Sbjct: 282 PQQCRPMCTNACVTNLQVSRPVSQCLPACMPSCTSSCVQSMCP 324
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 340 SCCNGYVRNIYN--PNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIGFK 513
SC + ++ ++ P C+P C+ C+ ++ A + TC + + CI I +
Sbjct: 136 SCSSNCIQQVFPSCPQQCQPVCTPQCIQSIQVAIQRPTCASSCMPSCSQSCIQKYEITVE 195
Query: 514 MAT 522
T
Sbjct: 196 QET 198
>AC006776-7|AAF60623.1| 361|Caenorhabditis elegans Serpentine
receptor, class w protein100 protein.
Length = 361
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3
Query: 261 YFV*HTPISLMVLTVXFCDRKPWLVLFP*NLAMFSLVL 148
+F+ TP+ ++ LT F D+ +V+ +LA++ LVL
Sbjct: 271 FFITGTPLGIIYLTKAFFDKSEAVVILSTDLALYFLVL 308
>Z68119-4|CAA92195.1| 271|Caenorhabditis elegans Hypothetical
protein T18D3.6 protein.
Length = 271
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 324 SQRHSFLLQWLREEHLQP 377
+QR FLLQ LR EH QP
Sbjct: 70 NQRRQFLLQHLRPEHFQP 87
>AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical
protein F56B3.2b protein.
Length = 295
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 510 QNGHCFRSRVRCRDGFKLDYGRKYCVPA 593
QN C+R R CR GF G+ +PA
Sbjct: 224 QNSGCYRGRCMCRCGFAAKNGKCVEIPA 251
>AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical
protein F56B3.2a protein.
Length = 432
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 510 QNGHCFRSRVRCRDGFKLDYGRKYCVPA 593
QN C+R R CR GF G+ +PA
Sbjct: 361 QNSGCYRGRCMCRCGFAAKNGKCVEIPA 388
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 289 KQIPKGXGSRPDLSVIRSCCNGYVRNIYNPNICEPHCSKGC 411
KQ PK G+ + S +S C G P + C+ GC
Sbjct: 379 KQAPKCVGANEEFSACKSGCEGTCEEPSPPCMNSTTCTSGC 419
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 289 KQIPKGXGSRPDLSVIRSCCNGYVRNIYNPNICEPHCSKGC 411
KQ PK G+ + S +S C G P + C+ GC
Sbjct: 379 KQAPKCVGANEEFSACKSGCEGTCEEPSPPCMNSTTCTSGC 419
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 527 EAVAILNPIGHVAMQKPPAFLTWSG 453
E VA++ PI + MQ P AF++W+G
Sbjct: 257 EGVAVIMPIEN-RMQSPHAFISWNG 280
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +1
Query: 379 NICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIGFKMATASGREXV 543
+IC+P C GCV T P C V C+ +C F + ++ V
Sbjct: 392 SICQPACDPGCVAIYTTTPAPLHC----VSQCQPACLPSCTDTFTTTISLPKQCV 442
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 320 PISASFVLAAMAT*----GTSTTLTFASRTAAKDASTHCAQRLKSARASLTTSRTPAAS 484
P S S V AM+T TSTT+ S T AST + + ++S T + +P+++
Sbjct: 297 PTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSST 355
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 320 PISASFVLAAMAT*----GTSTTLTFASRTAAKDASTHCAQRLKSARASLTTSRTPAAS 484
P S S V AM+T TSTT+ S T AST + + ++S T + +P+++
Sbjct: 297 PTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSST 355
>Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical
protein C48B4.8 protein.
Length = 196
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 479 PPAFLTWSGKHVQISGAVHNAL--THPLLQCGS 387
PP FL W KHV +S + NA+ T LLQ +
Sbjct: 23 PPTFLWWPAKHVILSIILANAIITTFFLLQASN 55
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 534 RVRCRDGFKLDYGRKYCVPA--CSNNCAG 614
R RCR GFKL ++ C P C +N G
Sbjct: 235 RCRCRVGFKLSENKRSCQPVDPCFDNKGG 263
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 534 RVRCRDGFKLDYGRKYCVPA--CSNNCAG 614
R RCR GFKL ++ C P C +N G
Sbjct: 235 RCRCRVGFKLSENKRSCQPVDPCFDNKGG 263
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +1
Query: 370 YNP--NICEPHCSKGCVNAL--CTAPEICTCFPDHVKNAGGFCI 489
Y+P +C P C CT P CTC P HV + CI
Sbjct: 35 YSPCTQMCPPTCESPNPQCRVDCTRPS-CTCLPGHVYSNSRQCI 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,190,274
Number of Sequences: 27780
Number of extensions: 270471
Number of successful extensions: 998
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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