Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0498
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122228-1|AAM52740.1|  935|Drosophila melanogaster RE27507p pro...    29   3.7  
AE014134-1118|AAF52407.3|  935|Drosophila melanogaster CG11319-P...    29   3.7  
Z98269-1|CAB10975.1| 1589|Drosophila melanogaster EG:87B1.5,FBgn...    29   6.5  
X63672-1|CAA45211.1| 1589|Drosophila melanogaster polyhomeotic p...    29   6.5  
AE014298-338|AAF45727.3| 1589|Drosophila melanogaster CG18412-PA...    29   6.5  
BT003644-1|AAO39648.1|  401|Drosophila melanogaster AT13284p pro...    28   8.6  
AY089225-1|AAL89963.1|  401|Drosophila melanogaster AT02038p pro...    28   8.6  
AE014296-1894|AAF50104.2|  757|Drosophila melanogaster CG6279-PA...    28   8.6  
AE014134-1527|AAF52684.2|  401|Drosophila melanogaster CG13088-P...    28   8.6  

>AY122228-1|AAM52740.1|  935|Drosophila melanogaster RE27507p
           protein.
          Length = 935

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 405 NVNFLLRHSVLL*YTLYQLRISYVVSTAHRHHR 307
           NV  L RHS L  YTLY ++ S  +   H  H+
Sbjct: 134 NVVKLFRHSYLAQYTLYDIQTSESIKLRHSPHQ 166


>AE014134-1118|AAF52407.3|  935|Drosophila melanogaster CG11319-PA
           protein.
          Length = 935

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 405 NVNFLLRHSVLL*YTLYQLRISYVVSTAHRHHR 307
           NV  L RHS L  YTLY ++ S  +   H  H+
Sbjct: 134 NVVKLFRHSYLAQYTLYDIQTSESIKLRHSPHQ 166


>Z98269-1|CAB10975.1| 1589|Drosophila melanogaster
           EG:87B1.5,FBgn0004861;ph-p protein.
          Length = 1589

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -2

Query: 525 TTHGPLRETLHSNKIPKSQATD*HSPRAPRNSCVHAITKTNVNFLLRHSVL 373
           T  G +  T H +  P +     H+P  P      +   TN N + RH+ L
Sbjct: 131 TGSGSVTPTSHRHGTPPTGRRQTHTPSTPNRPSAPSTPNTNCNSIARHTSL 181


>X63672-1|CAA45211.1| 1589|Drosophila melanogaster polyhomeotic
           protein.
          Length = 1589

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -2

Query: 525 TTHGPLRETLHSNKIPKSQATD*HSPRAPRNSCVHAITKTNVNFLLRHSVL 373
           T  G +  T H +  P +     H+P  P      +   TN N + RH+ L
Sbjct: 131 TGSGSVTPTSHRHGTPPTGRRQTHTPSTPNRPSAPSTPNTNCNSIARHTSL 181


>AE014298-338|AAF45727.3| 1589|Drosophila melanogaster CG18412-PA
           protein.
          Length = 1589

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -2

Query: 525 TTHGPLRETLHSNKIPKSQATD*HSPRAPRNSCVHAITKTNVNFLLRHSVL 373
           T  G +  T H +  P +     H+P  P      +   TN N + RH+ L
Sbjct: 131 TGSGSVTPTSHRHGTPPTGRRQTHTPSTPNRPSAPSTPNTNCNSIARHTSL 181


>BT003644-1|AAO39648.1|  401|Drosophila melanogaster AT13284p
           protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 244 SVGQHHPLKTSTSIFKDSITHSVMSMSCANHITNAQLV*GVSEKYRVSQKKVH-IC 408
           SV +H PLK  + +F DS   S        H+TN + +  V ++  +  +++H IC
Sbjct: 238 SVARHKPLKVQSLLFNDSFWSSERVAGSILHMTNLRRL--VLQEDDIDAQQLHTIC 291


>AY089225-1|AAL89963.1|  401|Drosophila melanogaster AT02038p
           protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 244 SVGQHHPLKTSTSIFKDSITHSVMSMSCANHITNAQLV*GVSEKYRVSQKKVH-IC 408
           SV +H PLK  + +F DS   S        H+TN + +  V ++  +  +++H IC
Sbjct: 238 SVARHKPLKVQSLLFNDSFWSSERVAGSILHMTNLRRL--VLQEDDIDAQQLHTIC 291


>AE014296-1894|AAF50104.2|  757|Drosophila melanogaster CG6279-PA
           protein.
          Length = 757

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -1

Query: 523 NARSAPRNAP*QQNSQEPGYRLTLSPRPSE*LRSRNNQNKCELSFETLCTS 371
           N+ S+P+N+   ++S+EP + +   P   E   S+  Q  C++    L T+
Sbjct: 347 NSVSSPQNSDISESSKEPAHLMEKEPSGQESANSQQVQMLCDMIRTELTTA 397


>AE014134-1527|AAF52684.2|  401|Drosophila melanogaster CG13088-PA
           protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 244 SVGQHHPLKTSTSIFKDSITHSVMSMSCANHITNAQLV*GVSEKYRVSQKKVH-IC 408
           SV +H PLK  + +F DS   S        H+TN + +  V ++  +  +++H IC
Sbjct: 238 SVARHKPLKVQSLLFNDSFWSSERVAGSILHMTNLRRL--VLQEDDIDAQQLHTIC 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,749,404
Number of Sequences: 53049
Number of extensions: 541181
Number of successful extensions: 1193
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)