Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0497
         (590 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY219181-1|AAO60072.1| 4243|Homo sapiens fibrocystin L protein.        31   3.0  
AK128617-1|BAC87532.1| 1372|Homo sapiens protein ( Homo sapiens ...    29   9.3  

>AY219181-1|AAO60072.1| 4243|Homo sapiens fibrocystin L protein.
          Length = 4243

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 532 YPFPSLGIKINIIISHPHKDSHHYRPRNWCRESNTHI 422
           Y  P + +    II+H  ++   YR  NW  ES  HI
Sbjct: 888 YNIPMMAVSFGQIITHETENEFVYRGNNWPGESKIHI 924


>AK128617-1|BAC87532.1| 1372|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46776 fis, clone TRACH3026650, highly  similar
           to Actin cross-linking family protein 7. ).
          Length = 1372

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 532 YPFPSLGIKINIIISHPHKDSHHYRPRNWCRESNTH 425
           Y  P + +    II+H  ++   YR  NW  ES  H
Sbjct: 888 YNIPMMAVSFGQIITHETENEFVYRGNNWPGESKIH 923


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,602,025
Number of Sequences: 237096
Number of extensions: 1669284
Number of successful extensions: 2492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2492
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)