Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0495
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.1  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 349 YYFTNNVL*HSTQLS 305
           Y FTNNVL H +Q S
Sbjct: 103 YNFTNNVLVHRSQNS 117


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 197 IHSPISANLTILQIIHYSYYLVIFPSVNKILV 102
           IH      L IL  I+Y YY  I  +V+ +L+
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFTVHLLLL 255


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 166 FCKLFIIVII 137
           FC LFI+VI+
Sbjct: 53  FCSLFIVVIL 62


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 549 QQCYC*AIVFCKPTLSA 499
           ++C    I FC+PT SA
Sbjct: 243 EKCGLKKIEFCRPTFSA 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,044
Number of Sequences: 336
Number of extensions: 2366
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)