Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0493
(583 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 141 1e-32
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 134 1e-30
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 119 4e-26
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 114 1e-24
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 93 3e-18
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 77 2e-13
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 73 4e-12
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 71 2e-11
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 69 8e-11
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 68 2e-10
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 64 3e-09
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 62 7e-09
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 62 1e-08
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 59 7e-08
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 57 3e-07
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 53 6e-06
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 51 2e-05
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 50 4e-05
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 50 5e-05
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 46 7e-04
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 43 0.006
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 42 0.014
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 41 0.019
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 41 0.019
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 41 0.025
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 40 0.032
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 40 0.032
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 40 0.043
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 37 0.30
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 37 0.40
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 35 1.2
UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep: ... 33 4.9
UniRef50_UPI0000DAE7B0 Cluster: hypothetical protein Rgryl_01001... 33 6.5
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 6.5
UniRef50_A7SQ91 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.5
UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, wh... 32 8.6
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 32 8.6
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 141 bits (341), Expect = 1e-32
Identities = 78/144 (54%), Positives = 90/144 (62%)
Frame = +2
Query: 77 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KM 256
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR K+
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 257 LSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIYGL 436
K ++ L K + + SIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 437 DFYVVLGRPGFNVAHRRRKTGKVG 508
DFYVVLGRPGF++A ++R+TG +G
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIG 152
Score = 136 bits (330), Expect = 3e-31
Identities = 69/109 (63%), Positives = 78/109 (71%)
Frame = +1
Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
K AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYD
Sbjct: 67 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 126
Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIIL 576
F + +K G HR++KE+AM+WFQQKYDGIIL
Sbjct: 127 GLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 134 bits (324), Expect = 1e-30
Identities = 68/109 (62%), Positives = 78/109 (71%)
Frame = +1
Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
K AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYD
Sbjct: 121 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 180
Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIIL 576
+ F + +K G HR++KE+AM+WFQQKY GIIL
Sbjct: 181 GLDFYVVLGRSGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYAGIIL 229
Score = 70.9 bits (166), Expect = 2e-11
Identities = 44/109 (40%), Positives = 56/109 (51%)
Frame = +2
Query: 182 TGQQPVFSKARYTVRSFGIRRX*KMLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRV 361
+GQ PV SKARYTVRSFGIRR K+ K ++ L K
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTG 157
Query: 362 ILASVFKNTLTWVSSTIXSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVG 508
+ + SIGIYGLDFYVVLGR GF++A ++R+TG +G
Sbjct: 158 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIG 206
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 119 bits (287), Expect = 4e-26
Identities = 70/143 (48%), Positives = 84/143 (58%)
Frame = +2
Query: 80 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KML 259
N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRR K+
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 260 SIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIYGLD 439
V K + L K + + + S GIYG+D
Sbjct: 69 CYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
Query: 440 FYVVLGRPGFNVAHRRRKTGKVG 508
FYVVL RPG+ VA RRR +VG
Sbjct: 129 FYVVLERPGYRVARRRRCKTRVG 151
Score = 116 bits (279), Expect = 4e-25
Identities = 59/110 (53%), Positives = 73/110 (66%)
Frame = +1
Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
K A + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYD
Sbjct: 66 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 125
Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIILN 579
++ + ++ + GI HR+TK+DAMKWFQ KY+G+ILN
Sbjct: 126 GMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILN 175
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 114 bits (275), Expect = 1e-24
Identities = 64/114 (56%), Positives = 75/114 (65%), Gaps = 4/114 (3%)
Frame = +1
Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD----XL 417
K AVH TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYD
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIF 123
Query: 418 NWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIILN 579
+ + + R AR R +K G H+ TKED + WF+QKYD +L+
Sbjct: 124 GMDFYVVMNRP--GARVTR--RKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLD 173
Score = 113 bits (271), Expect = 4e-24
Identities = 71/146 (48%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
Frame = +2
Query: 74 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*K 253
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRR K
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
Query: 254 MLSIVQSEELKQKKSL-RGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIY 430
+ V K ++ L RG+ E S + ++ + SIGI+
Sbjct: 65 IAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYD-PSIGIF 123
Query: 431 GLDFYVVLGRPGFNVAHRRRKTGKVG 508
G+DFYVV+ RPG V R+R G VG
Sbjct: 124 GMDFYVVMNRPGARVTRRKRCKGTVG 149
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 93.5 bits (222), Expect = 3e-18
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +2
Query: 68 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX 247
+ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRR
Sbjct: 33 ETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRN 92
Query: 248 *KM 256
K+
Sbjct: 93 EKI 95
Score = 86.2 bits (204), Expect = 5e-16
Identities = 44/94 (46%), Positives = 60/94 (63%)
Frame = +1
Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
K +V CT+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYD
Sbjct: 94 KISVFCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIF 153
Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKE 531
GLL R + ++K +K I H + +
Sbjct: 154 RYGLLCCVVKTRIESCSKKI--KKFKIGHTIKSD 185
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 77.4 bits (182), Expect = 2e-13
Identities = 48/143 (33%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Frame = +2
Query: 77 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KM 256
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ +
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENI 83
Query: 257 LSIVQSEELKQKKSLRGV*KS-ENMNCGVTTS---PPRVILASVFKNTLTWVSSTIXSIG 424
+V L+ +K+L + ++ + + + TS + + ++ L +G
Sbjct: 84 AVMV---TLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVG 140
Query: 425 IYGLDFYVVLGRPGFNVAHRRRK 493
I G+D + + RPG + RRR+
Sbjct: 141 ILGMDVAITIQRPGHRIVERRRQ 163
Score = 48.4 bits (110), Expect = 1e-04
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +1
Query: 256 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLW 432
AV T+RG KA L+R L + ++ + GN FGI+EHI + G+KYD L
Sbjct: 84 AVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILG 143
Query: 433 TGLLRXTWPARFQRSTQKA*DRKSGIP--HRLTKEDAMKWFQQKY 561
+ T R ++ R+ IP HR+T+E+ M Q +
Sbjct: 144 MD-VAITIQRPGHRIVERRRQRRGHIPRRHRVTREETMVLLNQLF 187
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 73.3 bits (172), Expect = 4e-12
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Frame = +2
Query: 101 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KMLSIVQSEE 280
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR + +V
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLRG 97
Query: 281 LKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTI-XSIGIYGLDFYVVLG 457
+ + L+ ++ ++ + + + + +GI+G+D + +
Sbjct: 98 QRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIE 157
Query: 458 RPGFNVAHRRRKTGKV 505
RPG+ VA RRR K+
Sbjct: 158 RPGYRVARRRRARSKI 173
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +1
Query: 256 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLW 432
AV T+RG +A E L++ L+ ++++ +F GN GFGI+EHI + G +YD
Sbjct: 90 AVMVTLRGQRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFG 149
Query: 433 TGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKY 561
++ ++ + ++ K HR+TKE++M + +++
Sbjct: 150 MDVILTIERPGYRVARRRRARSKIPRRHRVTKEESMVFLAKEF 192
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/141 (30%), Positives = 72/141 (51%)
Frame = +2
Query: 86 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KMLSI 265
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR + +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 266 VQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIYGLDFY 445
V + L + + + + + ++ L S ++GI+G D
Sbjct: 92 VTLRRNEAVWFLLRALAAVDFTLREESFNAGNVSFGIREHILVPGSRYDPALGIFGFDVA 151
Query: 446 VVLGRPGFNVAHRRRKTGKVG 508
V L RPGF V +RRR VG
Sbjct: 152 VTLARPGFRVQYRRRARADVG 172
Score = 41.5 bits (93), Expect = 0.014
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Frame = +1
Query: 268 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYD----XLNWNLW 432
T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YD +++
Sbjct: 93 TLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDVA 151
Query: 433 TGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQ 552
L R + +++R + G HR+++E+ +++FQ
Sbjct: 152 VTLARPGFRVQYRRRAR----ADVGKDHRVSREETIRFFQ 187
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 68.9 bits (161), Expect = 8e-11
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Frame = +2
Query: 74 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*K 253
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRK--- 68
Query: 254 MLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTW-VSSTIX----- 415
E + K +LRG + + +T R+ S+ + + ++ I
Sbjct: 69 ------GEAIGIKVTLRGEKALKFLKDALTVKENRLSRKSIGEGYFAFGIAEHIDLPGVD 122
Query: 416 ---SIGIYGLDFYVVLGRPGFNVAHRRRKTGKV 505
+GI+G+D V L R G+ VA RRRK K+
Sbjct: 123 YDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKI 155
Score = 52.8 bits (121), Expect = 6e-06
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Frame = +1
Query: 259 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDX----LNW 423
+ T+RG KA + L+ L V+E L R + G F FGI EHIDL G+ YD
Sbjct: 74 IKVTLRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGM 132
Query: 424 NLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQ 552
++ L R + +R +KA K HR+TKED ++W +
Sbjct: 133 DVCVSLKRRGYRVA-RRRRKKA---KIATSHRVTKEDTIRWLE 171
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 67.7 bits (158), Expect = 2e-10
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Frame = +2
Query: 86 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KM-LS 262
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR + +
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 263 IVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIYGLDF 442
+ E K + + + ++ R + + + +G+ GL+
Sbjct: 65 VTLRGEKAYKILKEKLLPAVDFKIKASSFTDRGFGFGIPEYIMIPGMKYDPELGLIGLEA 124
Query: 443 YVVLGRPGFNVAHRRRKTGKVG 508
YV L RPG+ V RR K KVG
Sbjct: 125 YVTLERPGYRVERRRIKRSKVG 146
Score = 48.8 bits (111), Expect = 9e-05
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Frame = +1
Query: 259 VHCTVRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDX----LN 420
V T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYD +
Sbjct: 63 VKVTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIG 121
Query: 421 WNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQK 558
+ L R + R +R K K G HRL KE+ +KW Q++
Sbjct: 122 LEAYVTLERPGY--RVERRRIKR--SKVGSRHRLNKEEIIKWAQEE 163
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 63.7 bits (148), Expect = 3e-09
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Frame = +2
Query: 77 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KM 256
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR K
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIR---KK 65
Query: 257 LSIVQSEELKQKKSLRGV*KSEN--MNCGVTTSPPRVILASVFK----NTLTWVSSTI-X 415
L I L+ KK+ + + CG T F + +
Sbjct: 66 LPIGLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDP 125
Query: 416 SIGIYGLDFYVVLGRPGFNVAHRRRKTGKV 505
S+GIYG+D V + G+ V R+ K +
Sbjct: 126 SVGIYGMDICVTFEKSGYRVKSRKVKRSHI 155
Score = 51.6 bits (118), Expect = 1e-05
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Frame = +1
Query: 268 TVRGAKAEEILERGL---KVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLWT 435
T+RG KAEE L+ K L +F GNF FG+ EHID G KYD
Sbjct: 73 TLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPS-----V 127
Query: 436 GLLRXTWPARFQRSTQKA*DRK---SGIP--HRLTKEDAMKWFQQKYD 564
G+ F++S + RK S IP H +TK++A+++ Q K+D
Sbjct: 128 GIYGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFD 175
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 62.5 bits (145), Expect = 7e-09
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +2
Query: 68 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 244
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRK 61
Score = 37.5 bits (83), Expect = 0.23
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +1
Query: 259 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLWT 435
V T+R A L+ ++Y++ +F GN FGI ++ D G+KYD + ++
Sbjct: 67 VKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDP-DIGIFG 125
Query: 436 GLLRXTWPARFQRSTQKA*DRKSGIPH--RLTKEDAMKWFQQKYD 564
+ + R +K +K IP R++KE+ +K+ Q+ ++
Sbjct: 126 MDIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFN 170
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 61.7 bits (143), Expect = 1e-08
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Frame = +2
Query: 80 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KML 259
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ +
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 260 SIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTI-XSIGIYGL 436
+ K K++ V + N N T + L+ K + IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 437 DFYVVLGRPGFNVAHRRRKTGKV 505
+ V +PG+ +A RR + KV
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKV 144
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Frame = +1
Query: 256 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLW 432
A T+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+ + ++
Sbjct: 61 ACKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNP-DIGIF 119
Query: 433 TGLLRXTWPARFQRSTQKA*DRKSGIP--HRLTKEDAMKWFQQKYD 564
+ T+ R ++ +K +P HR++KE+ MK+ + ++
Sbjct: 120 GMNVSVTFEKPGYRIAKRRIQQKK-VPAKHRISKEETMKYMEDNFN 164
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 59.3 bits (137), Expect = 7e-08
Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Frame = +2
Query: 101 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KMLSIVQSEE 280
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R + V +
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 281 LKQKKSL--RGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIYGLDFYVVL 454
+ +S EN + + T IGIYG+D VVL
Sbjct: 66 ADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVL 125
Query: 455 GRPGFNVAHRRRKTGKVG 508
RPG V+ RRR+ KVG
Sbjct: 126 ERPGHRVSRRRRRGVKVG 143
Score = 39.9 bits (89), Expect = 0.043
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +1
Query: 268 TVRGA-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLWTGL 441
T+R A K + L+ VRE L NF +GN FGI ++ D KYD + ++
Sbjct: 62 TIRDADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDP-DIGIYGMD 120
Query: 442 LRXTWPARFQR-STQKA*DRKSGIPHRLTKEDAMKWFQQKY 561
+ R S ++ K G+ HR+ K+++ WF+ ++
Sbjct: 121 VNVVLERPGHRVSRRRRRGVKVGVEHRVGKDESKAWFKDQF 161
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 56.8 bits (131), Expect = 3e-07
Identities = 33/104 (31%), Positives = 49/104 (47%)
Frame = -2
Query: 567 TIIFLLEPLHSIFLCEAVGNPTFPVLRLLCATLKPGRXXXXXXXXXXXXIEXIVLDTQVN 388
+I+ LLEP +FL V F + L +VLDTQ++
Sbjct: 10 SIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWVVLDTQID 69
Query: 387 VFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFFCFSSSDCTMDS 256
VFL+TE ++T EV Q +F D QT +DFF +++ +DS
Sbjct: 70 VFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFSLWTTNSNVDS 113
Score = 39.5 bits (88), Expect = 0.057
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -1
Query: 244 TTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 86
++DT+ + SLG L+ +L Q+LG + Q VT FTN +Q + D++ H
Sbjct: 118 SSDTESSDSVSSLGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQFLDLQFTH 170
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 52.8 bits (121), Expect = 6e-06
Identities = 41/140 (29%), Positives = 64/140 (45%)
Frame = +2
Query: 86 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KMLSI 265
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + +
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 266 VQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIYGLDFY 445
V + ++ L+ + V ++T SIGIYGLD
Sbjct: 74 VTLRDEMAEEFLQTALPLAELATSQFDDTGNFSF-GVEEHTEFPSQEYDPSIGIYGLDVT 132
Query: 446 VVLGRPGFNVAHRRRKTGKV 505
V L RPG+ VA R + + +
Sbjct: 133 VNLVRPGYRVAKRDKASRSI 152
Score = 40.7 bits (91), Expect = 0.025
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +1
Query: 268 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYD----XLNWNLW 432
T+R AEE L+ L + E L F TGNF FG++EH + +YD ++
Sbjct: 75 TLRDEMAEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVT 132
Query: 433 TGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYD 564
L+R P KA R HRL DA+ + + YD
Sbjct: 133 VNLVR---PGYRVAKRDKA-SRSIPTKHRLNPADAVAFIESTYD 172
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 51.2 bits (117), Expect = 2e-05
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Frame = +2
Query: 74 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*K 253
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEP 64
Query: 254 --MLSIVQSEELKQ--KKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSI 421
+ ++ ++ K K+ L K +N + + V SI
Sbjct: 65 IGVAVTIRGDDAKALLKRLLEA--KGNTVNGRAFDNFGNYSFGIREHIDIPGVKYE-PSI 121
Query: 422 GIYGLDFYVVLGRPGFNVAHRRRKTGKVG 508
GI GL V L RPG+ + R + VG
Sbjct: 122 GILGLGISVTLTRPGYGIRTRSKHKASVG 150
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +1
Query: 259 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLWT 435
V T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+ L
Sbjct: 67 VAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGL 126
Query: 436 GL-LRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKY 561
G+ + T P R+ K G H +T ++A + +++
Sbjct: 127 GISVTLTRPGYGIRTRSKH-KASVGKSHIITSQEAKDYLVKEF 168
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 50.0 bits (114), Expect = 4e-05
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Frame = +2
Query: 80 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KML 259
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKK----- 57
Query: 260 SIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTI--------- 412
+E + K +LRG + + + + ++ S F ++L VS I
Sbjct: 58 ----NEPIGCKVTLRGQRAQQFLETALGI-VDKTLVRSQF-DSLGNVSFGIEEHTDFPGM 111
Query: 413 ---XSIGIYGLDFYVVLGRPGFNVAHRRRKTGKV 505
+IG++G+D VV+ RPG + RR T K+
Sbjct: 112 KYDPNIGVFGMDVTVVIKRPGERICKRRIATRKI 145
Score = 49.2 bits (112), Expect = 7e-05
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +1
Query: 268 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLWTGLL 444
T+RG +A++ LE L + + L R F + GN FGI+EH D G+KYD N ++ +
Sbjct: 66 TLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDP-NIGVFGMDV 124
Query: 445 RXTWPARFQR-STQKA*DRKSGIPHRLTKEDAMKWFQQKY 561
+R ++ RK HR+T ED++ + Y
Sbjct: 125 TVVIKRPGERICKRRIATRKIPTNHRVTLEDSIAFLNDSY 164
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 49.6 bits (113), Expect = 5e-05
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Frame = +2
Query: 80 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX*KML 259
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKK----- 57
Query: 260 SIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTI--------- 412
+E + K +LRG E + G + L+ ++L VS I
Sbjct: 58 ----NEPIGCKVTLRGQRAQEFL--GTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGM 111
Query: 413 ---XSIGIYGLDFYVVLGRPGFNVAHRRRKTGKV 505
+IG++G+D VVL RPG + RR T K+
Sbjct: 112 RYDPNIGVFGMDVTVVLKRPGERICKRRIATRKI 145
Score = 48.8 bits (111), Expect = 9e-05
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +1
Query: 268 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDXLNWNLWTGLL 444
T+RG +A+E L ++ E L R F + GN FGI+EH D G++YD N ++ +
Sbjct: 66 TLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDP-NIGVFGMDV 124
Query: 445 RXTWPARFQR-STQKA*DRKSGIPHRLTKEDAMKWFQQKY 561
+R ++ RK HR+T +DA+ + + Y
Sbjct: 125 TVVLKRPGERICKRRIATRKIPTDHRVTVDDAIAFLNESY 164
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 46.0 bits (104), Expect = 7e-04
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Frame = +1
Query: 268 TVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYD----XLNWNLW 432
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYD L ++
Sbjct: 66 TIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVC 125
Query: 433 TGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKY 561
L R + R +RS KA + G HR+T +A + +++
Sbjct: 126 MTLSRPGYGIR-KRSKHKA---RVGRSHRITATEAKDFVVREF 164
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +2
Query: 86 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 244
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRK 57
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 42.7 bits (96), Expect = 0.006
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 265 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 411
C++ K L + LK++ + + NFS T FG GI +H++LG +D
Sbjct: 61 CSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFD 109
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 41.5 bits (93), Expect = 0.014
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 514 HRLTKEDAMKWFQQKYDGII 573
HR+TK+DAMKWFQ KY+G+I
Sbjct: 29 HRVTKDDAMKWFQVKYEGVI 48
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 41.1 bits (92), Expect = 0.019
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 77 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 241
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLR 79
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 41.1 bits (92), Expect = 0.019
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +2
Query: 77 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 244
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQ 81
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 40.7 bits (91), Expect = 0.025
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +2
Query: 71 NSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 241
N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F IR
Sbjct: 25 NYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFKIR 84
Query: 242 R 244
+
Sbjct: 85 K 85
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 40.3 bits (90), Expect = 0.032
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -2
Query: 411 IVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKD 295
+VLD +VNVF +TE ++TRG EV +F F + L++
Sbjct: 91 VVLDAEVNVFADTETEVTRGAEVALEEFEFLHLEPALQN 129
Score = 39.5 bits (88), Expect = 0.057
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -1
Query: 244 TTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 86
T + +R H + LG+ RLL+ +LLQHL + +T N V+ +L + PH
Sbjct: 148 TANAERAHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPH 200
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 40.3 bits (90), Expect = 0.032
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = +2
Query: 80 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 241
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIR 80
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 39.9 bits (89), Expect = 0.043
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +2
Query: 77 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 244
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R+
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRK 75
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 37.1 bits (82), Expect = 0.30
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = +2
Query: 80 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 241
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIR 80
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 36.7 bits (81), Expect = 0.40
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 250 KDAVHCTVRGAKAEEILERGLKVREYEL 333
K A + TV+G KA +LE GLKV+EYEL
Sbjct: 117 KIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -2
Query: 486 LLCATL---KPGRXXXXXXXXXXXXIEXIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSD 316
LLC L +PG +VLD ++NVF + E +++ GGE QF D
Sbjct: 62 LLCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLD 121
Query: 315 FQTPLKD 295
+ L D
Sbjct: 122 AEAALDD 128
>UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep:
Serine protease - Bombyx mori (Silk moth)
Length = 392
Score = 33.1 bits (72), Expect = 4.9
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 256 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFG-IQEH 387
A HCT R KAEE+ R + EY+++R N+S T NF I++H
Sbjct: 198 AAHCTRRW-KAEELFVR---LGEYDMKRTNYSRTYNFKVSEIRQH 238
>UniRef50_UPI0000DAE7B0 Cluster: hypothetical protein
Rgryl_01001234; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01001234 - Rickettsiella
grylli
Length = 752
Score = 32.7 bits (71), Expect = 6.5
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -2
Query: 291 FCFSSSDCTMDSIFXXRRIPKDRTVYLALENTGCCPVSCSNTLAARVSL-SPDSPTHMFK 115
+ ++ +DC ++++ R+ LAL+NT PV N+L+ + L +P+ + MF
Sbjct: 438 YFYAFNDCEVNALPLFSRLFPSSNQPLALKNTSESPVDIKNSLSIQTILKNPEKVSSMFT 497
Query: 114 QS 109
QS
Sbjct: 498 QS 499
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 6.5
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 289 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 411
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_A7SQ91 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 933
Score = 32.7 bits (71), Expect = 6.5
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = -3
Query: 542 FIASSFVRRWGIPLFLSYAFCVLR*NLAGQVXRKSPVHKFQLRXSYLIPKSMCS*IPKPK 363
F+ S+ R+ + +L+++FC + Q +PV L+ ++P SMC I K +
Sbjct: 203 FLKSAEERKKSVDPYLTFSFCGKQIQTKTQHHENNPVFNQMLQLPVMLP-SMCENI-KLQ 260
Query: 362 LPVAEKLSRRNSYSLTFKPLSRIS 291
L + S+ + + + PLS IS
Sbjct: 261 LWDWDSFSKHDCIATAYLPLSEIS 284
>UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome undetermined scaffold_53, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 1341
Score = 32.3 bits (70), Expect = 8.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 226 PHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 86
P C+PSL R+++CE L+ T Y+ A + +PH
Sbjct: 1131 PECLPSLKSLRIINCEGLECFPARGLSTPTLTELYISACQNLKSLPH 1177
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +2
Query: 80 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 241
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIR 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,153,830
Number of Sequences: 1657284
Number of extensions: 11068982
Number of successful extensions: 28096
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 27262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28071
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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