Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0493
(583 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.82
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.82
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.82
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.82
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.82
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.4
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 7.6
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 7.6
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 21 7.6
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.6
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 7.6
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 7.6
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.82
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N+W L + ++ S P++L K D +
Sbjct: 33 FGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLM 92
Query: 544 W 546
+
Sbjct: 93 Y 93
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 320 ENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIY 430
E + GVT + ++ TL VS I +G Y
Sbjct: 241 EKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTY 277
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.82
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N+W L + ++ S P++L K D +
Sbjct: 33 FGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLM 92
Query: 544 W 546
+
Sbjct: 93 Y 93
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.82
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 33 FGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLM 92
Query: 544 W 546
+
Sbjct: 93 Y 93
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 320 ENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIY 430
E + GVT + ++ TL VS I +G Y
Sbjct: 241 EKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTY 277
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.82
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 33 FGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLM 92
Query: 544 W 546
+
Sbjct: 93 Y 93
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 320 ENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGIY 430
E + GVT + ++ TL VS I +G Y
Sbjct: 241 EKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTY 277
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.82
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 33 FGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLM 92
Query: 544 W 546
+
Sbjct: 93 Y 93
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 204 ENTGCCPVSCSNTLAARVSLSPDSP 130
ENT C P + S + + PD P
Sbjct: 2280 ENTECHPDASSTMAPSTTPMVPDKP 2304
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 367 QNYPWRRSCHAA 332
Q YPW R H A
Sbjct: 209 QIYPWMRKVHVA 220
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 367 QNYPWRRSCHAA 332
Q YPW R H A
Sbjct: 209 QIYPWMRKVHVA 220
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 415 GDRT*YPSQCVLEYRSQ 365
G +T PSQ ++YR Q
Sbjct: 273 GTKTVMPSQSAIKYRKQ 289
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 493 LTPSVCYVETWPAKYXVKVQSINSN 419
LT +VC+V A + K SIN N
Sbjct: 190 LTNAVCFVPGVVAMFSRKPCSINEN 214
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 7.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 493 LTPSVCYVETWPAKYXVKVQSINSN 419
LT +VC+V A + K SIN N
Sbjct: 190 LTNAVCFVPGVVAMFSRKPCSINEN 214
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 7.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 338 VTTSPPRVILASVFKNTLTWVSSTIXSIGIYGLD 439
V + P I+ + + W++S S G+Y LD
Sbjct: 296 VLPTHPYQIIKNQLVYDVPWIASFTKSEGLYHLD 329
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 367 QNYPWRRSCHAA 332
Q YPW R H A
Sbjct: 209 QIYPWMRKVHVA 220
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,466
Number of Sequences: 336
Number of extensions: 3062
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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