Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0493
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   3.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   3.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.1  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   5.5  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       23   9.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   9.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.5  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   9.5  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   9.5  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.5  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
           FG  +Q+ ID+  K   L  N+W  L    +  R+  S           P++L K D + 
Sbjct: 53  FGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLRWNDSEYGGVRDLRITPNKLWKPDVLM 112

Query: 544 W 546
           +
Sbjct: 113 Y 113


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = +1

Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
           FG  +Q+ ID+  K   L  N W  L    +  R+  S           P++L K D + 
Sbjct: 53  FGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNDSEYGGVRDLRITPNKLWKPDVLM 112

Query: 544 W 546
           +
Sbjct: 113 Y 113


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 455 GRPGFNVAHRRRKTGKVGFPTASQRK 532
           G+PG+ +  ++   G  GFP    +K
Sbjct: 498 GQPGYGIPGQKGNAGMAGFPGLKGQK 523


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 365 LASVFKNTLTWVSSTIXSIGIYGLDFYVVLGRP 463
           L S   + L  +S ++ S  I+G+ F+++ G+P
Sbjct: 468 LCSDKTDNLIGISESLLSDAIFGMVFHLLAGQP 500


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 137 IHQHICSSKAF*YEDSALHF*NYXSEPSSPFYLSSTQAVV 18
           + Q    S+ +   DSA ++ N     S P Y+ + Q V+
Sbjct: 135 VQQCFARSREYQLNDSAAYYLNSLDRISQPAYIPTQQDVL 174


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 193 LLSCELLQHLGG 158
           LL+CE LQHL G
Sbjct: 223 LLACEQLQHLKG 234


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +1

Query: 274  RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 411
            R A   + LE    + +++L  +N  +  NF FG+     L ++++
Sbjct: 3256 RIAALSDELEESRHILQHKLYSNNSQSLNNFKFGLHTQEILPLQFN 3301


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 193 LLSCELLQHLGG 158
           LL+CE LQHL G
Sbjct: 76  LLACEQLQHLKG 87


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 193 LLSCELLQHLGG 158
           LL+CE LQHL G
Sbjct: 223 LLACEQLQHLKG 234


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 241 TDTKRPHCIPSLGKYR 194
           TD +RPHCI   G  R
Sbjct: 326 TDCERPHCITGDGVRR 341


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,102
Number of Sequences: 2352
Number of extensions: 11864
Number of successful extensions: 31
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)