Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0493
         (583 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p pro...   157   1e-38
AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA...   157   1e-38
U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal prot...   149   4e-36
BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p pro...   149   4e-36
AE014134-2421|AAF53348.1|  250|Drosophila melanogaster CG7968-PA...    30   2.6  
AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p pro...    29   3.5  
AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-P...    29   3.5  

>AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p
           protein.
          Length = 184

 Score =  157 bits (380), Expect = 1e-38
 Identities = 86/148 (58%), Positives = 96/148 (64%)
 Frame = +2

Query: 68  DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX 247
           D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 
Sbjct: 11  DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70

Query: 248 *KMLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGI 427
            K+         K ++ L    K                     +  +        SIGI
Sbjct: 71  EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130

Query: 428 YGLDFYVVLGRPGFNVAHRRRKTGKVGF 511
           YGLDFYVVLGRPG+NV HR+RK+G VGF
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGF 158



 Score =  149 bits (360), Expect = 4e-36
 Identities = 75/111 (67%), Positives = 81/111 (72%)
 Frame = +1

Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
           K AVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYD      
Sbjct: 72  KIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIY 131

Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIILNS 582
                       +  + +K      G  HRLTKEDAMKWFQQKYDGIILN+
Sbjct: 132 GLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNT 182


>AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA
           protein.
          Length = 184

 Score =  157 bits (380), Expect = 1e-38
 Identities = 86/148 (58%), Positives = 96/148 (64%)
 Frame = +2

Query: 68  DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX 247
           D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 
Sbjct: 11  DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70

Query: 248 *KMLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGI 427
            K+         K ++ L    K                     +  +        SIGI
Sbjct: 71  EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130

Query: 428 YGLDFYVVLGRPGFNVAHRRRKTGKVGF 511
           YGLDFYVVLGRPG+NV HR+RK+G VGF
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGF 158



 Score =  149 bits (360), Expect = 4e-36
 Identities = 75/111 (67%), Positives = 81/111 (72%)
 Frame = +1

Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
           K AVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYD      
Sbjct: 72  KIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIY 131

Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIILNS 582
                       +  + +K      G  HRLTKEDAMKWFQQKYDGIILN+
Sbjct: 132 GLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNT 182


>U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal protein
           DL11 protein.
          Length = 184

 Score =  149 bits (360), Expect = 4e-36
 Identities = 75/111 (67%), Positives = 81/111 (72%)
 Frame = +1

Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
           K AVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYD      
Sbjct: 72  KIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIY 131

Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIILNS 582
                       +  + +K      G  HRLTKEDAMKWFQQKYDGIILN+
Sbjct: 132 GLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNT 182



 Score =  147 bits (357), Expect = 8e-36
 Identities = 82/148 (55%), Positives = 93/148 (62%)
 Frame = +2

Query: 68  DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRX 247
           D ++    +LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 
Sbjct: 11  DPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70

Query: 248 *KMLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLTWVSSTIXSIGI 427
            K+         K ++ L    K                     +  +        SIGI
Sbjct: 71  EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130

Query: 428 YGLDFYVVLGRPGFNVAHRRRKTGKVGF 511
           YGLDFYVVLGRPG+NV HR+RK+G VGF
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGF 158


>BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p
           protein.
          Length = 163

 Score =  149 bits (360), Expect = 4e-36
 Identities = 75/111 (67%), Positives = 81/111 (72%)
 Frame = +1

Query: 250 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNL 429
           K AVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYD      
Sbjct: 51  KIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIY 110

Query: 430 WTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMKWFQQKYDGIILNS 582
                       +  + +K      G  HRLTKEDAMKWFQQKYDGIILN+
Sbjct: 111 GLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNT 161


>AE014134-2421|AAF53348.1|  250|Drosophila melanogaster CG7968-PA
           protein.
          Length = 250

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = +1

Query: 319 REYELRRDNFSATGNFGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DR 498
           +E  +R +NF   GNF   I E +D G ++  L WN    L    +   F + + K+ + 
Sbjct: 57  KEIGIRTENFGCNGNFTDLIIEGLD-GYEFSKLEWN--NILHTIKFDMNFPKISLKSTNY 113

Query: 499 KSGIPHRLTKEDAMKW 546
           K  +  RL   D   W
Sbjct: 114 KLNLLARLFGADFSLW 129


>AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p
           protein.
          Length = 2171

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 181 ELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPHY 83
           ELL HLG   Q   GF  T ++  L  + +PHY
Sbjct: 626 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 657


>AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-PA
            protein.
          Length = 2599

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 181  ELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPHY 83
            ELL HLG   Q   GF  T ++  L  + +PHY
Sbjct: 1054 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 1085


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,058,907
Number of Sequences: 53049
Number of extensions: 521537
Number of successful extensions: 1320
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)