Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0493
(583 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 1.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.9
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 3.8
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 3.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 3.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 6.7
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 1.7
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +1
Query: 361 NFGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAM 540
+FG + + ID+ K L NLW L R+ S PHRL K D +
Sbjct: 52 SFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVL 111
Query: 541 KW 546
+
Sbjct: 112 MY 113
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 16 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
Query: 544 W 546
+
Sbjct: 76 Y 76
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 16 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
Query: 544 W 546
+
Sbjct: 76 Y 76
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 16 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
Query: 544 W 546
+
Sbjct: 76 Y 76
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 16 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
Query: 544 W 546
+
Sbjct: 76 Y 76
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 16 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
Query: 544 W 546
+
Sbjct: 76 Y 76
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 16 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
Query: 544 W 546
+
Sbjct: 76 Y 76
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 84 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 143
Query: 544 W 546
+
Sbjct: 144 Y 144
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 364 FGFGIQEHIDLGIKYDXLNWNLWTGLLRXTWPARFQRSTQKA*DRKSGIPHRLTKEDAMK 543
FG +Q+ ID+ K L N W L + ++ S P++L K D +
Sbjct: 84 FGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 143
Query: 544 W 546
+
Sbjct: 144 Y 144
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/39 (25%), Positives = 14/39 (35%)
Frame = -3
Query: 278 PRTVQWTASFXYDGYQKTALYT*PWKIQAVVL*VAPTPW 162
P V W + Y T P+ + + V P PW
Sbjct: 199 PPLVGWKDKRSHPAYNMTFAQNGPFNTTTIFVPVKPCPW 237
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 286 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 381
AEE +G+ Y + R+ S+T GF ++
Sbjct: 386 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 417
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 286 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 381
AEE +G+ Y + R+ S+T GF ++
Sbjct: 301 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 332
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 286 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 381
AEE +G+ Y + R+ S+T GF ++
Sbjct: 620 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 651
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 340 DNFSATGNFGFGIQEHIDLGIKYDXLNWNLW 432
+N + G + + IDL +K L N+W
Sbjct: 42 NNDTVVVKLGLRLSQLIDLNLKDQILTTNVW 72
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 332 CGVTTSPPRVILASVFKN 385
C + PPRVIL+S K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 332 CGVTTSPPRVILASVFKN 385
C + PPRVIL+S K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 332 CGVTTSPPRVILASVFKN 385
C + PPRVIL+S K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 470 NVAHRRRKTGKVG 508
NVA R TGKVG
Sbjct: 923 NVASRMESTGKVG 935
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,362
Number of Sequences: 438
Number of extensions: 3358
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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