Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0492
(535 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 141 8e-33
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 134 1e-30
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 111 1e-23
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 96 4e-19
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 85 1e-15
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 85 1e-15
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 84 2e-15
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 83 3e-15
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 78 1e-13
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 75 1e-12
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 75 1e-12
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 66 5e-10
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 61 1e-08
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 53 5e-06
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 47 3e-04
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 46 4e-04
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 45 0.001
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 44 0.002
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 43 0.004
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 43 0.005
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 42 0.012
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 40 0.036
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 40 0.047
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 40 0.047
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 39 0.083
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 38 0.11
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 38 0.11
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 38 0.14
UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing f... 37 0.33
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 36 0.44
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 36 0.44
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 36 0.77
UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1; Ba... 35 1.0
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 35 1.0
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 35 1.3
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 34 1.8
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 34 2.3
UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1; Fusobact... 33 4.1
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 33 4.1
UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep... 33 5.4
UniRef50_UPI0000DC1EC4 Cluster: leukocyte immunoglobulin-like re... 32 7.2
UniRef50_A0L8C4 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 32 7.2
UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep:... 32 7.2
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 32 7.2
UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep: ... 32 9.5
UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellula... 32 9.5
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 9.5
UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial... 32 9.5
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 141 bits (342), Expect = 8e-33
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +3
Query: 9 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 188
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 189 VXIRVTVKGGGHVAQVYAIRQAFQR 263
V IRV VKGGGHVAQ+YAIRQ+ +
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISK 90
Score = 119 bits (287), Expect = 4e-26
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2
Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
S SKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 134 bits (324), Expect = 1e-30
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +3
Query: 3 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 182
+E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE+F
Sbjct: 6 KEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKERF 65
Query: 183 SMVXIRVTVKGGGHVAQVYAIRQAFQR 263
+ V IR+ VKGGG+VAQ+YAIRQA +
Sbjct: 66 AGVDIRIRVKGGGNVAQIYAIRQAISK 92
Score = 117 bits (282), Expect = 1e-25
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +2
Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
+ SKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89 AISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 111 bits (267), Expect = 1e-23
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +3
Query: 12 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 191
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 192 XIRVTVKGGGHVAQVYAIRQAFQR 263
IRV V GGGHV+QVYAIRQA +
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAK 87
Score = 87.8 bits (208), Expect = 1e-16
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +2
Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
+ +K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 84 AIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 96.3 bits (229), Expect = 4e-19
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2
Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
+ +K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 96 AIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
Score = 53.2 bits (122), Expect = 4e-06
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +3
Query: 150 EPILLLGKEKFSMVXIRVTVKGGGHVAQVYAIRQAFQR 263
EP+L++G +KF+ V IRV V GGGH +QVYAIRQA +
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAK 99
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 85.0 bits (201), Expect = 1e-15
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = +3
Query: 21 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIR 200
V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+ F + +
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 201 VTVKGGGHVAQVYAIRQAFQR 263
+ V GGGHV+Q+YA+RQA R
Sbjct: 85 IKVAGGGHVSQIYAVRQAISR 105
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +2
Query: 293 DEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 113 DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +2
Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
+F+KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 86 AFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
Score = 52.4 bits (120), Expect = 6e-06
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 12 IQAVQVFGRKKTATAVAYCKR-GHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 188
+++V G+KK A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 189 VXIRVTVKGGGHVAQVYAIRQAFQR 263
+ +T K GG V++VYA+R AF +
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 84.2 bits (199), Expect = 2e-15
Identities = 50/145 (34%), Positives = 69/145 (47%)
Frame = +3
Query: 12 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 191
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 192 XIRVTVKGGGHVAQVYAIRQAFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 371
I V VKG GHV Q+YA+ Q + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 372 XXXXXXXXXXXXXDTRNLTVKPSRK 446
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 83.4 bits (197), Expect = 3e-15
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +2
Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
+ +K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFGG GARAR QKSYR
Sbjct: 140 AIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQKSYR 199
Score = 79.4 bits (187), Expect = 5e-14
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +3
Query: 18 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 185
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 33.9 bits (74), Expect = 2.3
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 183 SMVXIRVTVKGGGHVAQVYAIRQAFQR 263
S V IR+ V GGG +Q+YAIRQA +
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAK 143
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +2
Query: 212 GWWSCSTSLRYQTSFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 391
G S + + + +K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 392 GPGARARYQKSYR 430
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 69.7 bits (163), Expect = 4e-11
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 12 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 188
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 189 VXIRVTVKGGGHVAQVYAIRQAFQR 263
+ I V V GGG V+Q YA RQA +
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAK 93
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 74.9 bits (176), Expect = 1e-12
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = +3
Query: 12 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 191
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 192 XIRVTVKGGGHVAQVYAIRQAFQR 263
I V V+GGG + Q A R A R
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIAR 84
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 263 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 430
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 74.5 bits (175), Expect = 1e-12
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +3
Query: 21 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIR 200
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 201 VTVKGGGHVAQVYAIRQAFQR 263
+ KGGG V+Q+YAIRQ+ +
Sbjct: 63 IFSKGGGKVSQIYAIRQSISK 83
Score = 70.1 bits (164), Expect = 3e-11
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2
Query: 206 SQGWWSCSTSLRYQTSFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 385
S+G S + S SK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 386 FGGPGARARYQKSYR 430
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 66.1 bits (154), Expect = 5e-10
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +3
Query: 9 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 185
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 186 MVXIRVTVKGGGHVAQVYAI 245
V I V V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 212
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+V IRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 213 GGGHVAQVYAIRQAFQR 263
GGG + Q A+R A R
Sbjct: 71 GGGVMGQADAVRMAIAR 87
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +2
Query: 284 KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
+ +D+ S+ +++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 104 RMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 52.8 bits (121), Expect = 5e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 296 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
+ ++++++ + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 105 KTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 46.8 bits (106), Expect = 3e-04
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVXIRVT 206
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E I V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 207 VKGGGHVAQVYAIRQAFQR 263
V GGG AQ AI+ +
Sbjct: 69 VLGGGFAAQADAIKHGISK 87
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 46.4 bits (105), Expect = 4e-04
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 210 KGGGHVAQVYAIRQAFQR 263
KGGG Q AIR R
Sbjct: 66 KGGGINGQAGAIRHGITR 83
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 21 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVX 194
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFY- 66
Query: 195 IRVTVKGGGHVAQVYAIRQAFQR 263
+ V GGG +Q AI A R
Sbjct: 67 --IKVSGGGINSQAEAISLAISR 87
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 3 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 95
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+KT+ A G G + VNG P L+ L L++P++ G EK I VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEKD--FDITVTV 68
Query: 210 KGGGHVAQVYAIRQAFQR 263
KGGG Q A R R
Sbjct: 69 KGGGFTGQAGATRLGIAR 86
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 43.2 bits (97), Expect = 0.004
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+KT++A + + G G + +NG PLD R + +++P++ L + S + TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 210 KGGGHVAQVYAIRQAFQR 263
+GGG Q AIR R
Sbjct: 71 QGGGDSGQAGAIRHGITR 88
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 42.7 bits (96), Expect = 0.005
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGK-EKFSMVXIRVT 206
GR+K +TA + + G G +++N R L+ R Q +++P+ L+ EKF M +T
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKFDMY---IT 66
Query: 207 VKGGGHVAQVYAIRQAFQR 263
V GGG Q AIR R
Sbjct: 67 VSGGGTTGQAGAIRHGITR 85
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 41.5 bits (93), Expect = 0.012
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 9 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPR--LLQYKLQEPILLLGKEK 179
P + + GR+KT+ A A K G G + VN + + D ++ R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 180 FSMVXIRVTVKGGGHVAQVYAIRQAFQR 263
+ + + V GGG QV AIR A R
Sbjct: 70 YDL---NLNVTGGGTTGQVGAIRHALAR 94
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 39.9 bits (89), Expect = 0.036
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+K A G G + NGR L D +L Q ++ P++LLG+E I +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 210 KGGGHVAQVYAIRQAFQR 263
GGG Q A R A R
Sbjct: 120 GGGGPTGQAGAFRLAIAR 137
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 39.5 bits (88), Expect = 0.047
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+KTA A K G G L +NG+ L D + + ++ P L E F V + V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 210 KGGGHVAQVYAI 245
GGG Q AI
Sbjct: 139 TGGGTTGQTGAI 150
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 39.5 bits (88), Expect = 0.047
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSMVXIRV 203
GR+KT+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 204 TVKGGGHVAQVYAIRQAFQR 263
VKGGG V QV AI+ R
Sbjct: 77 KVKGGGLVGQVNAIKLGIAR 96
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 38.7 bits (86), Expect = 0.083
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+K + A G G + +NGR LD L+ +++P++ G E +RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 210 KGGGHVAQVYAIRQAFQR 263
GGG Q AIR R
Sbjct: 68 DGGGFTGQAGAIRHGIAR 85
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 38.3 bits (85), Expect = 0.11
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 212
G++KT++AV + G G + VNG+ L PR L + L + + TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 213 GGGHVAQVYAIRQAFQR 263
GGG Q A+ A R
Sbjct: 254 GGGVTGQAEAVTLALGR 270
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 38.3 bits (85), Expect = 0.11
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 33 GRKKTATAVAYC--KRGHGMLRVNGR-PLDLVEPRLLQYKLQEPILLLG-KEKFSMVXIR 200
GR+K++TA Y + G + +N R P D +L+ +++P+ L K+ F I
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNFD---IN 66
Query: 201 VTVKGGGHVAQVYAIRQAFQR 263
V VKGGG Q AIR R
Sbjct: 67 VVVKGGGFTGQAGAIRLGIVR 87
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 37.9 bits (84), Expect = 0.14
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 3 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 179
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGDVN 62
Query: 180 FSMVXIRVTVKGGGHVAQVYAIRQAFQR 263
+ IRV+ GGG QV A R R
Sbjct: 63 SFDLIIRVS--GGGVQGQVIATRLGLAR 88
>UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing family
M member 1; n=30; Eutheria|Rep: Pleckstrin homology
domain-containing family M member 1 - Homo sapiens
(Human)
Length = 1058
Score = 36.7 bits (81), Expect = 0.33
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -3
Query: 296 RLHISGRRRSEPLKSLSDSVNLCYMTTTLDCHSDXNHREFFLAEQKDRFLKFVLQQ 129
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 36.3 bits (80), Expect = 0.44
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
G++KTA A A K G G ++VNG L P + Q + Q ++ + TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 210 KGGGHVAQVYAIRQAFQR 263
GGG AQ AIR A +
Sbjct: 333 SGGGRSAQAGAIRLAMAK 350
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 36.3 bits (80), Expect = 0.44
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+K++ A Y + G G ++VN R D ++ L+ P++L + + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 210 KGGGHVAQVYAIRQAFQR 263
GGG Q AIR R
Sbjct: 74 YGGGISGQSGAIRHGISR 91
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 35.5 bits (78), Expect = 0.77
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+K + A + K+G G + VNGR +D + ++ P ++ + + +R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 210 KGGGHVAQVYAI 245
GGGH Q A+
Sbjct: 87 AGGGHTGQAGAM 98
>UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S9, putative -
Babesia bovis
Length = 683
Score = 35.1 bits (77), Expect = 1.0
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 6 EPIQAVQVF--GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK-E 176
EP++ +V+ G +KT+ AV Y + G+G + +N R R ++L+E + L
Sbjct: 550 EPVKFTKVYERGSRKTSVAVVYLEPGNGHIIINDRD-GYQYVRYCTHRLREILEPLDSIY 608
Query: 177 KFSMVXIRVTVKGGGHVAQVYAIRQAFQR 263
+ I V GGG Q AIR A R
Sbjct: 609 AYKRFNIVARVNGGGISGQSGAIRHALCR 637
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 35.1 bits (77), Expect = 1.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL-LLGKEKFSMVXIRVTV 209
G++K ++AV G G + VNG+ L+ PRL + + + L + + TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 210 KGGGHVAQVYAIRQAFQR 263
+GGG Q AI A R
Sbjct: 159 RGGGVTGQAEAITLAVAR 176
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 34.7 bits (76), Expect = 1.3
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSMVXIRVT 206
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + I V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 207 VKGGGHVAQVYAIRQAFQR 263
+GGG Q ++R R
Sbjct: 75 AEGGGLTGQADSVRLGVAR 93
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 34.3 bits (75), Expect = 1.8
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 6 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKF 182
EP Q GR+K A A G G ++NGR L D ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELEGR 102
Query: 183 SMVXIRVTVKGGGHVAQVYAIRQAFQR 263
V R++ GGG Q A+R R
Sbjct: 103 YDVIARIS--GGGVSGQAGALRLGVAR 127
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 33.9 bits (74), Expect = 2.3
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLV-----EPRLLQYKLQEPILLLGKEKFSMVXI 197
GR+KTA A Y + G G ++VNG+ + + P ++ ++ + KF +V
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAIEPLEVTNTLGKFDLV-- 68
Query: 198 RVTVKGGGHVAQVYAIRQAFQR 263
+ V GGG Q A+R R
Sbjct: 69 -IRVNGGGLSGQSGAVRLGIAR 89
>UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
30S ribosomal protein S9 - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 101
Score = 33.1 bits (72), Expect = 4.1
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+KT+ A G + +NG+ +D R + K+ E L L E + ++V V
Sbjct: 12 GRRKTSVARVRLIPGGQGVEINGKAMDEYFGGRAILSKIVEQPLAL-TETLNKFAVKVNV 70
Query: 210 KGGGHVAQVYAIR 248
GGG+ Q AIR
Sbjct: 71 VGGGNSGQAGAIR 83
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 212
G++K++ A G G VNG P D+ R++ K L + + + TV
Sbjct: 12 GKRKSSKATVKMLPGTGKFYVNGSPFDVYFQRMVHRK-HAVYPLAACNRLTNYNVWATVH 70
Query: 213 GGGHVAQVYAIRQAFQR 263
GGG Q A+ A +
Sbjct: 71 GGGPTGQSGAVHAAISK 87
>UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep:
Ribosomal protein S9 - Dehalococcoides sp. BAV1
Length = 132
Score = 32.7 bits (71), Expect = 5.4
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILLLG-KEKFSMVXIRVT 206
GR+KTA A G+G++ ++G+P++ R+ + + P+++ KF+ V +
Sbjct: 12 GRRKTAVATVKLMSGNGVIVIDGKPIEERFTRIQERNVILNPMMVTDTMGKFNAV---IK 68
Query: 207 VKGGGHVAQVYAIRQAFQR 263
V GGG Q AI R
Sbjct: 69 VLGGGVTGQSGAIAHGIAR 87
>UniRef50_UPI0000DC1EC4 Cluster: leukocyte immunoglobulin-like
receptor, subfamily B, member 3; n=2; Rattus
norvegicus|Rep: leukocyte immunoglobulin-like receptor,
subfamily B, member 3 - Rattus norvegicus
Length = 624
Score = 32.3 bits (70), Expect = 7.2
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = -3
Query: 311 PSLRLRLHISGRRRSEPLKSLSDSVNLCYMTTTLDCHSDXNHREFFLAEQ--KDRFLKF- 141
PS L++ ISG R L S + M+ TL C+SD + +F L ++ D F
Sbjct: 370 PSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFS 429
Query: 140 VLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLDGLDGL 6
++GL+ + Y +HS T R G L+SE+ D L
Sbjct: 430 QWTKAGLSMTNFTLGYGRHS-TGGQYRCYGAHNLSSEWSASSDPL 473
>UniRef50_A0L8C4 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein precursor; n=1; Magnetococcus sp.
MC-1|Rep: 4Fe-4S ferredoxin, iron-sulfur binding domain
protein precursor - Magnetococcus sp. (strain MC-1)
Length = 243
Score = 32.3 bits (70), Expect = 7.2
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 52 PQLRIASVVMECCV*TGAHWTWLSP-DCCSTNFRNLSFCSARKNSLWLXSE*QSRVVVM* 228
P +R+ + M+ GA W L CS + + + A +N++ + QSR +
Sbjct: 23 PGMRLIAAPMQKGANAGARWAMLIDLSKCSEDCTDCTTACATENNIPQIED-QSRQIQYI 81
Query: 229 HKFTLSDKLFKGSDRLLPEIC 291
K T++DK K + LP +C
Sbjct: 82 RKITITDKTGKKPQQSLPVLC 102
>UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep: 9S
ribosomal protein - Zea mays (Maize)
Length = 221
Score = 32.3 bits (70), Expect = 7.2
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 15 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 185
Q + GR+KTA A + G G + +N R P ++Y + P++ LG EK
Sbjct: 94 QRITATGRRKTAIARVVLQEGTGKVFINFRDAKEYLQGNPMWMEY-CKVPLMTLGFEKNY 152
Query: 186 MVXIRVTVKGGGHVAQVYAI 245
V ++ V GGG Q AI
Sbjct: 153 DVFVK--VHGGGLSGQAQAI 170
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 32.3 bits (70), Expect = 7.2
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGR-PLDLVEPRLLQYKL-QEPILLLGKEKFSMVXIRVT 206
GR+K+A A G G L +NGR D ++ + L + P+ LG E + I V
Sbjct: 16 GRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLE--NSYDIYVN 73
Query: 207 VKGGGHVAQVYAIRQAFQR 263
GGG Q AIR R
Sbjct: 74 ATGGGLTGQADAIRLGIAR 92
>UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep:
U2266c - Mycobacterium leprae
Length = 146
Score = 31.9 bits (69), Expect = 9.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 402 APGPPNFLGSQRRGSATSKLLSYCTRMSLISFFEASSTYFW 280
A GP N + S R G T+ LLS T ++F TY W
Sbjct: 101 ALGPQNCIHSSRTGQTTAHLLSEHTETCCLTFVPIRWTYVW 141
>UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellular
organisms|Rep: 30S ribosomal protein S9 - Acidobacteria
bacterium (strain Ellin345)
Length = 131
Score = 31.9 bits (69), Expect = 9.5
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 33 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 209
GR+K+A A + + G G +VNG+ + + + P++L E + + V
Sbjct: 11 GRRKSAVARVFLRPGSGEFKVNGKGFEEYFVTEAQRQSAKSPLVL--TETIATFNVVANV 68
Query: 210 KGGGHVAQVYAIRQAFQR 263
GGG Q A++ R
Sbjct: 69 SGGGVNGQADAVKMGLAR 86
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 9.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 341 RSLLVADPRRCEPKKFGGPGARARY 415
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
>UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 492
Score = 31.9 bits (69), Expect = 9.5
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 36 RKKTATAVAYCKRGHGMLRV-NGRPLDLVEPRLLQYKLQEP 155
R TAT+V +RG G RV +G P V R L Y L++P
Sbjct: 229 RPATATSVGATRRGLGWFRVFSGTPTGAVAARALTYWLRDP 269
>UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=5; Saccharomycetales|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Candida albicans
(Yeast)
Length = 336
Score = 31.9 bits (69), Expect = 9.5
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 RKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILLLGKEKFSMVXIRVTVK 212
++K++ A Y +G G + VNG+ L P + K L P ++ +E V +VT
Sbjct: 217 KRKSSIAKIYLVKGEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQEGKYNVFAQVT-- 274
Query: 213 GGGHVAQVYAIRQAFQR 263
GGG+ Q AI A +
Sbjct: 275 GGGYTGQSEAIMYAIAK 291
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,740,886
Number of Sequences: 1657284
Number of extensions: 11371313
Number of successful extensions: 29726
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 28935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29714
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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