Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0492
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   8.5  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 25/96 (26%), Positives = 32/96 (33%)
 Frame = -3

Query: 302 RLRLHISGRRRSEPLKSLSDSVNLCYMTTTLDCHSDXNHREFFLAEQKDRFLKFVLQQSG 123
           R  LH SG  R +   + S    LC+   T    +      FF A   DR          
Sbjct: 25  REHLHESGFVRRQGSHAKSSVHKLCHARNTTQPRTRWYIPAFFAAHPTDR------TGCP 78

Query: 122 LNQVQWAPVYTQHSMTTLAIRNCGGGFLTSEYLDGL 15
            +   W   Y   S+TT     C    L S  + GL
Sbjct: 79  TDPDGWRLDYRGSSITTTTTSTCHSHLLPSLAITGL 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,044
Number of Sequences: 2352
Number of extensions: 11278
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)