Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0492
         (535 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   151   8e-37
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   151   8e-37
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    30   1.7  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    30   1.7  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    28   9.2  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  151 bits (365), Expect = 8e-37
 Identities = 68/87 (78%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 182
           REP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEKF
Sbjct: 6   REPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKF 65

Query: 183 SMVXIRVTVKGGGHVAQVYAIRQAFQR 263
           + V IRV V GGGHVAQ+YAIRQA  +
Sbjct: 66  AGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  121 bits (292), Expect = 5e-28
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +2

Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
           + SKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  151 bits (365), Expect = 8e-37
 Identities = 68/87 (78%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 182
           REP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLGKEKF
Sbjct: 6   REPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKF 65

Query: 183 SMVXIRVTVKGGGHVAQVYAIRQAFQR 263
           + V IRV V GGGHVAQ+YAIRQA  +
Sbjct: 66  AGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  121 bits (292), Expect = 5e-28
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +2

Query: 251 SFSKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 430
           + SKAL+AFYQKYVDEASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89  AISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 39  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVKG 215
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    V +   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 216 GGHVAQVYAIR 248
           GG   Q  AIR
Sbjct: 334 GGPSGQAGAIR 344



 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +2

Query: 347 LLVADPRRCEPKKFGGPGARARY 415
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 39  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVKG 215
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    V +   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 216 GGHVAQVYAIR 248
           GG   Q  AIR
Sbjct: 334 GGPSGQAGAIR 344



 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +2

Query: 347 LLVADPRRCEPKKFGGPGARARY 415
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 332 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR*AFKK 445
           ++D+ LLVA P  C PKK   P    + Q+  +   KK
Sbjct: 233 RFDQRLLVAIPPNCPPKKQNKPQQNKQQQQQNKQQQKK 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,101,822
Number of Sequences: 53049
Number of extensions: 518892
Number of successful extensions: 1624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)