Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0491
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P62136 Cluster: Serine/threonine-protein phosphatase PP...    51   2e-05
UniRef50_P62140 Cluster: Serine/threonine-protein phosphatase PP...    50   4e-05
UniRef50_A3B8P6 Cluster: Putative uncharacterized protein; n=1; ...    42   0.013
UniRef50_Q24FD4 Cluster: Putative uncharacterized protein; n=1; ...    39   0.12 
UniRef50_Q4TJA8 Cluster: Chromosome undetermined SCAF300, whole ...    36   0.82 
UniRef50_A0DN20 Cluster: Serine/threonine protein phosphatase; n...    35   1.4  
UniRef50_Q5LJN2 Cluster: CG40448-PA.3; n=9; Fungi/Metazoa group|...    33   4.4  
UniRef50_Q6YVS9 Cluster: Splicing coactivator subunit-like prote...    33   5.8  

>UniRef50_P62136 Cluster: Serine/threonine-protein phosphatase
           PP1-alpha catalytic subunit; n=337; root|Rep:
           Serine/threonine-protein phosphatase PP1-alpha catalytic
           subunit - Homo sapiens (Human)
          Length = 330

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 30/45 (66%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKRK----CHSGLNM-GRXNTPPRAQPKXKK 130
           DETLMCSFQILKPADK K      SGLN  GR  TPPR   K KK
Sbjct: 286 DETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPPRNSAKAKK 330


>UniRef50_P62140 Cluster: Serine/threonine-protein phosphatase
           PP1-beta catalytic subunit; n=51; cellular
           organisms|Rep: Serine/threonine-protein phosphatase
           PP1-beta catalytic subunit - Homo sapiens (Human)
          Length = 327

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKRK--CHSGLNMGRXNTPPRAQPKXKK 130
           DETLMCSFQILKP++K+    + GLN GR  TPPR     KK
Sbjct: 285 DETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRTANPPKK 326


>UniRef50_A3B8P6 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 177

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKR-KCHSGLNMGRXNTPPR 109
           D++L CSFQILKP+DK+ K  +G NM +  TPPR
Sbjct: 138 DDSLTCSFQILKPSDKKGKAGTG-NMSKPGTPPR 170


>UniRef50_Q24FD4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 209

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKR 61
           DETLMCSFQILKPADK+
Sbjct: 108 DETLMCSFQILKPADKK 124


>UniRef50_Q4TJA8 Cluster: Chromosome undetermined SCAF300, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF300, whole
           genome shotgun sequence - Tetraodon nigroviridis (Green
           puffer)
          Length = 147

 Score = 35.9 bits (79), Expect = 0.82
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKR 61
           DETLMCSFQILKP++K+
Sbjct: 128 DETLMCSFQILKPSEKK 144


>UniRef50_A0DN20 Cluster: Serine/threonine protein phosphatase;
           n=10; Eukaryota|Rep: Serine/threonine protein
           phosphatase - Paramecium tetraurelia
          Length = 1310

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 5   TRDETLMCSFQILKPADKRKCHSGLNMGRXNTPPRAQ 115
           T DE+LMCSFQILKPA++          + N PP A+
Sbjct: 286 TVDESLMCSFQILKPAEQ----GAQGASQQNKPPSAK 318


>UniRef50_Q5LJN2 Cluster: CG40448-PA.3; n=9; Fungi/Metazoa
           group|Rep: CG40448-PA.3 - Drosophila melanogaster (Fruit
           fly)
          Length = 278

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
 Frame = +2

Query: 11  DETLMCSFQILKPADK---RKCHS 73
           DETLMCSF +LKP+ K   RK HS
Sbjct: 253 DETLMCSFYVLKPSKKPGLRKIHS 276


>UniRef50_Q6YVS9 Cluster: Splicing coactivator subunit-like protein;
           n=2; Oryza sativa (japonica cultivar-group)|Rep:
           Splicing coactivator subunit-like protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 122

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 295 KTGSWPKGPRYQAINSKKKRRAEIASKRYPVTERHLNNGSCSFQLKMHSGFRR 453
           +T  W +  R +    ++ RRAE A +R   TE    +G+ S   +   G RR
Sbjct: 64  ETERWTRSARMRRRGGRRSRRAEKAGRRSSATEEREGDGASSIPARRKGGERR 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,726,403
Number of Sequences: 1657284
Number of extensions: 12211029
Number of successful extensions: 31952
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31932
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)