Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0491
         (639 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)       58   6e-09
SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)                    28   7.4  
SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
          Length = 293

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 28/41 (68%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKRKC-HSGLNMGRXNTPPRAQPKXKK 130
           DETLMCSFQILKPADK+K  + GLN GR  TPPR Q +  K
Sbjct: 251 DETLMCSFQILKPADKKKFPYGGLNSGRPVTPPRGQQQKAK 291


>SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 121

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKRK--CHSGLNMGRXNTPPRAQPKXKK 130
           D+TLMCSFQILKP++K+    + GLN GR  TPPR  P+ KK
Sbjct: 76  DDTLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRG-PQNKK 116


>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 204

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
 Frame = +2

Query: 11  DETLMCSFQILKPADKRK--CHSGLNMGRXNTPPRAQPKXKK 130
           D+TLMCSFQILKP++K+    + GLN GR  TPPR  P+ KK
Sbjct: 159 DDTLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRG-PQNKK 199


>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
          Length = 465

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 14  ETLMCSFQILKPAD 55
           E LMCSF ILKP D
Sbjct: 199 ENLMCSFSILKPGD 212


>SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 768

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 273 QTLTLMLQLRKQRFTKTSTRSRYFKCTAVREGC-PCVCRRTAR 148
           +T++L+ Q R +    +S+R+RY +CT++ E    C+ R  A+
Sbjct: 398 KTVSLIEQSRAEERAASSSRARYERCTSMLEKLQSCLNRAEAK 440


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,217,464
Number of Sequences: 59808
Number of extensions: 388708
Number of successful extensions: 914
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)